RNA–Protein interactions for RNA: ENST00000588745.5

SMAD4-205, Transcript of SMAD family member 4, humanhuman

TSL 5 BASIC

Gene SMAD4, Length 1,371 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMAD4-205ENST00000588745 RALGAPA2Q2PPJ7 1873 aa12.33□□□□□ -0.44
SMAD4-205ENST00000588745 A0A1B0GUA9 196 aa12.33□□□□□ -0.44
SMAD4-205ENST00000588745 ZC3H11AO75152 810 aaKnown RBP eCLIP12.33□□□□□ -0.44
SMAD4-205ENST00000588745 LRRN2O75325 713 aa12.33□□□□□ -0.44
SMAD4-205ENST00000588745 CABYRO75952 493 aa12.33□□□□□ -0.44
SMAD4-205ENST00000588745 IPO7O95373 1038 aaKnown RBP12.33□□□□□ -0.44
SMAD4-205ENST00000588745 C4BPAP04003 597 aaKnown RBP12.33□□□□□ -0.44
SMAD4-205ENST00000588745 RPLP2P05387 115 aaKnown RBP12.33□□□□□ -0.44
SMAD4-205ENST00000588745 FERP16591 822 aa12.33□□□□□ -0.44
SMAD4-205ENST00000588745 FGFR4P22455 802 aa12.33□□□□□ -0.44
SMAD4-205ENST00000588745 EIF4BP23588 611 aaKnown RBP12.33□□□□□ -0.44
SMAD4-205ENST00000588745 EIF4A3P38919 411 aaKnown RBP12.33□□□□□ -0.44
SMAD4-205ENST00000588745 PRKCIP41743 596 aa12.33□□□□□ -0.44
SMAD4-205ENST00000588745 STAT1P42224 750 aa12.33□□□□□ -0.44
SMAD4-205ENST00000588745 KIF11P52732 1056 aa12.33□□□□□ -0.44
SMAD4-205ENST00000588745 CRYBB1P53674 252 aaPredicted RBP12.33□□□□□ -0.44
SMAD4-205ENST00000588745 POU5F1Q01860 360 aaKnown RBP12.33□□□□□ -0.44
SMAD4-205ENST00000588745 BIRC3Q13489 604 aa12.33□□□□□ -0.44
SMAD4-205ENST00000588745 SNX17Q15036 470 aa12.33□□□□□ -0.44
SMAD4-205ENST00000588745 ENOX2Q16206 610 aaKnown RBP12.33□□□□□ -0.44
SMAD4-205ENST00000588745 DCAF4L1Q3SXM0 396 aa12.33□□□□□ -0.44
SMAD4-205ENST00000588745 TDRD10Q5VZ19 366 aaKnown RBP12.33□□□□□ -0.44
SMAD4-205ENST00000588745 GDF6Q6KF10 455 aaPredicted RBP12.33□□□□□ -0.44
SMAD4-205ENST00000588745 FMNL3Q8IVF7 1028 aa12.33□□□□□ -0.44
SMAD4-205ENST00000588745 FAM84AQ96KN4 292 aa12.33□□□□□ -0.44
SMAD4-205ENST00000588745 NT5C1BQ96P26 610 aa12.33□□□□□ -0.44
SMAD4-205ENST00000588745 ADPGKQ9BRR6 497 aa12.33□□□□□ -0.44
SMAD4-205ENST00000588745 BEGAINQ9BUH8 593 aa12.33□□□□□ -0.44
SMAD4-205ENST00000588745 GPR88Q9GZN0 384 aa12.33□□□□□ -0.44
SMAD4-205ENST00000588745 DEF6Q9H4E7 631 aa12.33□□□□□ -0.44
SMAD4-205ENST00000588745 CDHR5Q9HBB8 845 aa12.33□□□□□ -0.44
SMAD4-205ENST00000588745 HMX1Q9NP08 348 aaPredicted RBP12.33□□□□□ -0.44
SMAD4-205ENST00000588745 REXO2Q9Y3B8 237 aaKnown RBP12.33□□□□□ -0.44
SMAD4-205ENST00000588745 MOXD2PA6NHM9 499 aa12.32□□□□□ -0.44
SMAD4-205ENST00000588745 KIF2AO00139 706 aaPredicted RBP12.32□□□□□ -0.44
SMAD4-205ENST00000588745 IL18RAPO95256 599 aa12.32□□□□□ -0.44
SMAD4-205ENST00000588745 LCA5LO95447 670 aa12.32□□□□□ -0.44
SMAD4-205ENST00000588745 HLA-DRAP01903 254 aa12.32□□□□□ -0.44
SMAD4-205ENST00000588745 CLTAP09496 248 aa12.32□□□□□ -0.44
SMAD4-205ENST00000588745 STAG3L1P0CL83 205 aa12.32□□□□□ -0.44
SMAD4-205ENST00000588745 CXCL8P10145 99 aa12.32□□□□□ -0.44
SMAD4-205ENST00000588745 SOX5P35711 763 aa12.32□□□□□ -0.44
SMAD4-205ENST00000588745 PIK3CAP42336 1068 aa12.32□□□□□ -0.44
SMAD4-205ENST00000588745 ACLYP53396 1101 aa12.32□□□□□ -0.44
SMAD4-205ENST00000588745 OSTNP61366 133 aa12.32□□□□□ -0.44
SMAD4-205ENST00000588745 KRT83P78385 493 aa12.32□□□□□ -0.44
SMAD4-205ENST00000588745 MRPS6P82932 125 aaKnown RBP12.32□□□□□ -0.44
SMAD4-205ENST00000588745 ARID5AQ03989 594 aa12.32□□□□□ -0.44
SMAD4-205ENST00000588745 NCBP1Q09161 790 aaKnown RBP12.32□□□□□ -0.44
SMAD4-205ENST00000588745 KLHL30Q0D2K2 578 aa12.32□□□□□ -0.44
SMAD4-205ENST00000588745 DRAP1Q14919 205 aaPredicted RBP12.32□□□□□ -0.44
SMAD4-205ENST00000588745 PTPN14Q15678 1187 aa12.32□□□□□ -0.44
SMAD4-205ENST00000588745 DNTTIP2Q5QJE6 756 aaKnown RBP12.32□□□□□ -0.44
SMAD4-205ENST00000588745 PDZRN4Q6ZMN7 1036 aaPredicted RBP12.32□□□□□ -0.44
SMAD4-205ENST00000588745 IRF2BP2Q7Z5L9 587 aa12.32□□□□□ -0.44
SMAD4-205ENST00000588745 APBB1IPQ7Z5R6 666 aaPredicted RBP12.32□□□□□ -0.44
SMAD4-205ENST00000588745 RSPH3Q86UC2 560 aa12.32□□□□□ -0.44
SMAD4-205ENST00000588745 SERINC5Q86VE9 423 aa12.32□□□□□ -0.44
SMAD4-205ENST00000588745 OR5B17Q8NGF7 314 aa12.32□□□□□ -0.44
SMAD4-205ENST00000588745 TMEM40Q8WWA1 233 aa12.32□□□□□ -0.44
SMAD4-205ENST00000588745 RPF1Q9H9Y2 349 aaKnown RBP12.32□□□□□ -0.44
SMAD4-205ENST00000588745 UBE2TQ9NPD8 197 aaPredicted RBP12.32□□□□□ -0.44
SMAD4-205ENST00000588745 TRPV2Q9Y5S1 764 aa12.32□□□□□ -0.44
SMAD4-205ENST00000588745 BZW2Q9Y6E2 419 aaKnown RBP12.32□□□□□ -0.44
SMAD4-205ENST00000588745 M0QZ92 97 aa12.31□□□□□ -0.44
SMAD4-205ENST00000588745 AKR1B10O60218 316 aa12.31□□□□□ -0.44
SMAD4-205ENST00000588745 B4GALT4O60513 344 aa12.31□□□□□ -0.44
SMAD4-205ENST00000588745 OFD1O75665 1012 aa12.31□□□□□ -0.44
SMAD4-205ENST00000588745 VNN1O95497 513 aa12.31□□□□□ -0.44
SMAD4-205ENST00000588745 PNMA6AP0CW24 399 aaPredicted RBP12.31□□□□□ -0.44
SMAD4-205ENST00000588745 TNNT1P13805 278 aa12.31□□□□□ -0.44
SMAD4-205ENST00000588745 ANXA13P27216 316 aa12.31□□□□□ -0.44
SMAD4-205ENST00000588745 AXLP30530 894 aa12.31□□□□□ -0.44
SMAD4-205ENST00000588745 HOXA11P31270 313 aaPredicted RBP12.31□□□□□ -0.44
SMAD4-205ENST00000588745 PTPN11Q06124 597 aaPredicted RBP12.31□□□□□ -0.44
SMAD4-205ENST00000588745 ARHGAP44Q17R89 818 aa12.31□□□□□ -0.44
SMAD4-205ENST00000588745 ASTE1Q2TB18 679 aaPredicted RBP12.31□□□□□ -0.44
SMAD4-205ENST00000588745 LHX8Q68G74 356 aa12.31□□□□□ -0.44
SMAD4-205ENST00000588745 NOTUMQ6P988 496 aa12.31□□□□□ -0.44
SMAD4-205ENST00000588745 SLC27A1Q6PCB7 646 aa12.31□□□□□ -0.44
SMAD4-205ENST00000588745 RPAINQ86UA6 219 aa12.31□□□□□ -0.44
SMAD4-205ENST00000588745 EFCAB13Q8IY85 973 aa12.31□□□□□ -0.44
SMAD4-205ENST00000588745 TMEM192Q8IY95 271 aa12.31□□□□□ -0.44
SMAD4-205ENST00000588745 PPM1KQ8N3J5 372 aa12.31□□□□□ -0.44
SMAD4-205ENST00000588745 HELQQ8TDG4 1101 aa12.31□□□□□ -0.44
SMAD4-205ENST00000588745 FAM212AQ96EL1 285 aa12.31□□□□□ -0.44
SMAD4-205ENST00000588745 FAM81BQ96LP2 452 aa12.31□□□□□ -0.44
SMAD4-205ENST00000588745 TSEN34Q9BSV6 310 aaKnown RBP12.31□□□□□ -0.44
SMAD4-205ENST00000588745 CELF4Q9BZC1 486 aaKnown RBP12.31□□□□□ -0.44
SMAD4-205ENST00000588745 MTMR12Q9C0I1 747 aa12.31□□□□□ -0.44
SMAD4-205ENST00000588745 XRN2Q9H0D6 950 aaKnown RBP eCLIP12.31□□□□□ -0.44
SMAD4-205ENST00000588745 HAUS4Q9H6D7 363 aa12.31□□□□□ -0.44
SMAD4-205ENST00000588745 C1orf112Q9NSG2 853 aa12.31□□□□□ -0.44
SMAD4-205ENST00000588745 GRIN2DO15399 1336 aa12.31□□□□□ -0.44
SMAD4-205ENST00000588745 RBAK-RBAKDNI3L0D1 243 aa12.3□□□□□ -0.44
SMAD4-205ENST00000588745 ZNF263O14978 683 aa12.3□□□□□ -0.44
SMAD4-205ENST00000588745 EVI5O60447 810 aa12.3□□□□□ -0.44
SMAD4-205ENST00000588745 GFPT2O94808 682 aa12.3□□□□□ -0.44
SMAD4-205ENST00000588745 NPTXRO95502 500 aa12.3□□□□□ -0.44
SMAD4-205ENST00000588745 TUBB4AP04350 444 aa12.3□□□□□ -0.44
Retrieved 100 of 20,778 RNA–protein pairs in 58.8 ms