RNA–Protein interactions for RNA: ENST00000587502.2

LSM7-204, Transcript of LSM7 homolog, U6 small nuclear RNA and mRNA degradation associated, humanhuman

TSL 1 (best) BASIC

Gene LSM7, Length 575 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LSM7-204ENST00000587502 GRIN1Q05586 938 aa25.56■■□□□ 1.68
LSM7-204ENST00000587502 C12orf76Q8N812 135 aaPredicted RBP25.56■■□□□ 1.68
LSM7-204ENST00000587502 HDAC7Q8WUI4 952 aa25.56■■□□□ 1.68
LSM7-204ENST00000587502 ACAP3Q96P50 834 aa25.56■■□□□ 1.68
LSM7-204ENST00000587502 PPP1R10Q96QC0 940 aaKnown RBP25.56■■□□□ 1.68
LSM7-204ENST00000587502 BLOC1S4Q9NUP1 217 aa25.56■■□□□ 1.68
LSM7-204ENST00000587502 SLC38A7Q9NVC3 462 aa25.56■■□□□ 1.68
LSM7-204ENST00000587502 MTMR6Q9Y217 621 aa25.56■■□□□ 1.68
LSM7-204ENST00000587502 NPHP3-ACAD11A0A0J9YXS1 232 aa25.55■■□□□ 1.68
LSM7-204ENST00000587502 KRT18P05783 430 aaKnown RBP25.55■■□□□ 1.68
LSM7-204ENST00000587502 DDIT3P35638 169 aa25.55■■□□□ 1.68
LSM7-204ENST00000587502 TXLNAP40222 546 aa25.55■■□□□ 1.68
LSM7-204ENST00000587502 NCKAP1LP55160 1127 aa25.55■■□□□ 1.68
LSM7-204ENST00000587502 XKR4Q5GH76 650 aa25.55■■□□□ 1.68
LSM7-204ENST00000587502 PDXDC1Q6P996 788 aa25.55■■□□□ 1.68
LSM7-204ENST00000587502 CYP26C1Q6V0L0 522 aa25.55■■□□□ 1.68
LSM7-204ENST00000587502 ZBTB33Q86T24 672 aa25.55■■□□□ 1.68
LSM7-204ENST00000587502 RIN2Q8WYP3 895 aaPredicted RBP25.55■■□□□ 1.68
LSM7-204ENST00000587502 LARP4BQ92615 738 aaKnown RBP25.55■■□□□ 1.68
LSM7-204ENST00000587502 RABGGTAQ92696 567 aa25.55■■□□□ 1.68
LSM7-204ENST00000587502 REEP2Q9BRK0 252 aa25.55■■□□□ 1.68
LSM7-204ENST00000587502 PAAF1Q9BRP4 392 aa25.55■■□□□ 1.68
LSM7-204ENST00000587502 TTPALQ9BTX7 342 aa25.55■■□□□ 1.68
LSM7-204ENST00000587502 POMKQ9H5K3 350 aa25.55■■□□□ 1.68
LSM7-204ENST00000587502 PARVGQ9HBI0 331 aa25.55■■□□□ 1.68
LSM7-204ENST00000587502 SMIM28A0A1B0GU29 152 aa25.54■■□□□ 1.68
LSM7-204ENST00000587502 FAM86C2PA6NEL3 165 aa25.54■■□□□ 1.68
LSM7-204ENST00000587502 TMEM189-UBE2V1I3L0A0 370 aa25.54■■□□□ 1.68
LSM7-204ENST00000587502 FAM13AO94988 1023 aa25.54■■□□□ 1.68
LSM7-204ENST00000587502 KIF4AO95239 1232 aa25.54■■□□□ 1.68
LSM7-204ENST00000587502 HSP90AA1P07900 732 aaKnown RBP25.54■■□□□ 1.68
LSM7-204ENST00000587502 MARCKSP29966 332 aaPredicted RBP25.54■■□□□ 1.68
LSM7-204ENST00000587502 PLA2G5P39877 138 aa25.54■■□□□ 1.68
LSM7-204ENST00000587502 ZNF131P52739 623 aa25.54■■□□□ 1.68
LSM7-204ENST00000587502 DHX8Q14562 1220 aaKnown RBP25.54■■□□□ 1.68
LSM7-204ENST00000587502 MCM6Q14566 821 aa25.54■■□□□ 1.68
LSM7-204ENST00000587502 NOLC1Q14978 699 aaKnown RBP eCLIP25.54■■□□□ 1.68
LSM7-204ENST00000587502 DCLRE1AQ6PJP8 1040 aa25.54■■□□□ 1.68
LSM7-204ENST00000587502 ALKAL1Q6UXT8 129 aa25.54■■□□□ 1.68
LSM7-204ENST00000587502 C15orf39Q6ZRI6 1047 aa25.54■■□□□ 1.68
LSM7-204ENST00000587502 GPR149Q86SP6 731 aa25.54■■□□□ 1.68
LSM7-204ENST00000587502 MYCT1Q8N699 235 aa25.54■■□□□ 1.68
LSM7-204ENST00000587502 CMASQ8NFW8 434 aaPredicted RBP25.54■■□□□ 1.68
LSM7-204ENST00000587502 DDX27Q96GQ7 796 aaKnown RBP25.54■■□□□ 1.68
LSM7-204ENST00000587502 PLEKHA4Q9H4M7 779 aa25.54■■□□□ 1.68
LSM7-204ENST00000587502 FBXO2Q9UK22 296 aaPredicted RBP25.54■■□□□ 1.68
LSM7-204ENST00000587502 ABLIM1O14639 778 aa25.53■■□□□ 1.68
LSM7-204ENST00000587502 CLDN3O15551 220 aa25.53■■□□□ 1.68
LSM7-204ENST00000587502 OSTNP61366 133 aa25.53■■□□□ 1.68
LSM7-204ENST00000587502 CACNB1Q02641 598 aaPredicted RBP25.53■■□□□ 1.68
LSM7-204ENST00000587502 TMC5Q6UXY8 1006 aa25.53■■□□□ 1.68
LSM7-204ENST00000587502 HAUS6Q7Z4H7 955 aa25.53■■□□□ 1.68
LSM7-204ENST00000587502 CEP120Q8N960 986 aa25.53■■□□□ 1.68
LSM7-204ENST00000587502 EDAQ92838 391 aa25.53■■□□□ 1.68
LSM7-204ENST00000587502 BICD1Q96G01 975 aa25.53■■□□□ 1.68
LSM7-204ENST00000587502 CXCL16Q9H2A7 254 aa25.53■■□□□ 1.68
LSM7-204ENST00000587502 MAN1C1Q9NR34 630 aa25.53■■□□□ 1.68
LSM7-204ENST00000587502 TSHZ2Q9NRE2 1034 aa25.53■■□□□ 1.68
LSM7-204ENST00000587502 CACNG4Q9UBN1 327 aa25.53■■□□□ 1.68
LSM7-204ENST00000587502 STK17AQ9UEE5 414 aa25.53■■□□□ 1.68
LSM7-204ENST00000587502 USTQ9Y2C2 406 aa25.53■■□□□ 1.68
LSM7-204ENST00000587502 TRAPPC3O43617 180 aa25.52■■□□□ 1.68
LSM7-204ENST00000587502 TBCAO75347 108 aaKnown RBP25.52■■□□□ 1.68
LSM7-204ENST00000587502 B3GAT3O94766 335 aa25.52■■□□□ 1.68
LSM7-204ENST00000587502 KCNE1P15382 129 aa25.52■■□□□ 1.68
LSM7-204ENST00000587502 GLRA4Q5JXX5 417 aa25.52■■□□□ 1.68
LSM7-204ENST00000587502 FAM171A1Q5VUB5 890 aa25.52■■□□□ 1.68
LSM7-204ENST00000587502 SPRYD3Q8NCJ5 442 aa25.52■■□□□ 1.68
LSM7-204ENST00000587502 HASPINQ8TF76 798 aa25.52■■□□□ 1.68
LSM7-204ENST00000587502 EPSTI1Q96J88 318 aa25.52■■□□□ 1.68
LSM7-204ENST00000587502 B3GALT6Q96L58 329 aa25.52■■□□□ 1.68
LSM7-204ENST00000587502 SNX27Q96L92 541 aa25.52■■□□□ 1.68
LSM7-204ENST00000587502 RHOBTB2Q9BYZ6 727 aa25.52■■□□□ 1.68
LSM7-204ENST00000587502 ANKFY1Q9P2R3 1169 aa25.52■■□□□ 1.68
LSM7-204ENST00000587502 HCN4Q9Y3Q4 1203 aa25.52■■□□□ 1.68
LSM7-204ENST00000587502 CEBPZQ03701 1054 aaKnown RBP25.51■■□□□ 1.67
LSM7-204ENST00000587502 MCL1Q07820 350 aa25.51■■□□□ 1.67
LSM7-204ENST00000587502 SLC39A14Q15043 492 aa25.51■■□□□ 1.67
LSM7-204ENST00000587502 KYAT1Q16773 422 aa25.51■■□□□ 1.67
LSM7-204ENST00000587502 UPP1Q16831 310 aa25.51■■□□□ 1.67
LSM7-204ENST00000587502 FAM173BQ6P4H8 233 aa25.51■■□□□ 1.67
LSM7-204ENST00000587502 PDZRN4Q6ZMN7 1036 aaPredicted RBP25.51■■□□□ 1.67
LSM7-204ENST00000587502 PLCD3Q8N3E9 789 aa25.51■■□□□ 1.67
LSM7-204ENST00000587502 KRI1Q8N9T8 703 aaKnown RBP25.51■■□□□ 1.67
LSM7-204ENST00000587502 LRRC15Q8TF66 581 aa25.51■■□□□ 1.67
LSM7-204ENST00000587502 PIK3R5Q8WYR1 880 aa25.51■■□□□ 1.67
LSM7-204ENST00000587502 FAM122AQ96E09 287 aa25.51■■□□□ 1.67
LSM7-204ENST00000587502 ZBTB45Q96K62 511 aaPredicted RBP25.51■■□□□ 1.67
LSM7-204ENST00000587502 CNTN3Q9P232 1028 aa25.51■■□□□ 1.67
LSM7-204ENST00000587502 GTF3C5Q9Y5Q8 519 aaPredicted RBP25.51■■□□□ 1.67
LSM7-204ENST00000587502 TRAK2O60296 914 aa25.5■■□□□ 1.67
LSM7-204ENST00000587502 TRIOO75962 3097 aa25.5■■□□□ 1.67
LSM7-204ENST00000587502 WEE2P0C1S8 567 aa25.5■■□□□ 1.67
LSM7-204ENST00000587502 HARSP12081 509 aaKnown RBP25.5■■□□□ 1.67
LSM7-204ENST00000587502 MATR3P43243 847 aaKnown RBP eCLIP25.5■■□□□ 1.67
LSM7-204ENST00000587502 CLCNKBP51801 687 aa25.5■■□□□ 1.67
LSM7-204ENST00000587502 SPECC1Q5M775 1068 aa25.5■■□□□ 1.67
LSM7-204ENST00000587502 RTP2Q5QGT7 225 aa25.5■■□□□ 1.67
LSM7-204ENST00000587502 RRAGBQ5VZM2 374 aa25.5■■□□□ 1.67
LSM7-204ENST00000587502 KANK3Q6NY19 840 aa25.5■■□□□ 1.67
Retrieved 100 of 20,778 RNA–protein pairs in 53 ms