RNA–Protein interactions for RNA: ENST00000581835.1

PPP4R1-220, Transcript of protein phosphatase 4 regulatory subunit 1, humanhuman

TSL 2

Gene PPP4R1, Length 379 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PPP4R1-220ENST00000581835 TOPORSQ9NS56 1045 aaPredicted RBP11.24□□□□□ -0.61
PPP4R1-220ENST00000581835 ANKFY1Q9P2R3 1169 aa11.24□□□□□ -0.61
PPP4R1-220ENST00000581835 ADAM28Q9UKQ2 775 aa11.24□□□□□ -0.61
PPP4R1-220ENST00000581835 CFAP45Q9UL16 551 aa11.24□□□□□ -0.61
PPP4R1-220ENST00000581835 TBX20Q9UMR3 447 aa11.24□□□□□ -0.61
PPP4R1-220ENST00000581835 FAM50BQ9Y247 325 aa11.24□□□□□ -0.61
PPP4R1-220ENST00000581835 ZDHHC9Q9Y397 364 aa11.24□□□□□ -0.61
PPP4R1-220ENST00000581835 SMIM28A0A1B0GU29 152 aa11.23□□□□□ -0.61
PPP4R1-220ENST00000581835 CASTOR2A6NHX0 329 aa11.23□□□□□ -0.61
PPP4R1-220ENST00000581835 CLDN3O15551 220 aa11.23□□□□□ -0.61
PPP4R1-220ENST00000581835 MEFVO15553 781 aaPredicted RBP11.23□□□□□ -0.61
PPP4R1-220ENST00000581835 TADA2AO75478 443 aa11.23□□□□□ -0.61
PPP4R1-220ENST00000581835 PIGRP01833 764 aa11.23□□□□□ -0.61
PPP4R1-220ENST00000581835 SRGAP2BP0DMP2 458 aa11.23□□□□□ -0.61
PPP4R1-220ENST00000581835 HARSP12081 509 aaKnown RBP11.23□□□□□ -0.61
PPP4R1-220ENST00000581835 ABCD1P33897 745 aa11.23□□□□□ -0.61
PPP4R1-220ENST00000581835 YARSP54577 528 aaKnown RBP11.23□□□□□ -0.61
PPP4R1-220ENST00000581835 GTF2BQ00403 316 aa11.23□□□□□ -0.61
PPP4R1-220ENST00000581835 HSP90AA2PQ14568 343 aaPredicted RBP11.23□□□□□ -0.61
PPP4R1-220ENST00000581835 E2F4Q16254 413 aa11.23□□□□□ -0.61
PPP4R1-220ENST00000581835 GLRA4Q5JXX5 417 aa11.23□□□□□ -0.61
PPP4R1-220ENST00000581835 KIAA0319Q5VV43 1072 aa11.23□□□□□ -0.61
PPP4R1-220ENST00000581835 ANKRD54Q6NXT1 300 aa11.23□□□□□ -0.61
PPP4R1-220ENST00000581835 FUT10Q6P4F1 479 aa11.23□□□□□ -0.61
PPP4R1-220ENST00000581835 CASP10Q92851 521 aa11.23□□□□□ -0.61
PPP4R1-220ENST00000581835 BICD1Q96G01 975 aa11.23□□□□□ -0.61
PPP4R1-220ENST00000581835 SNX27Q96L92 541 aa11.23□□□□□ -0.61
PPP4R1-220ENST00000581835 ZMAT2Q96NC0 199 aaKnown RBP11.23□□□□□ -0.61
PPP4R1-220ENST00000581835 ACAP3Q96P50 834 aa11.23□□□□□ -0.61
PPP4R1-220ENST00000581835 KLHL5Q96PQ7 755 aa11.23□□□□□ -0.61
PPP4R1-220ENST00000581835 ST6GALNAC4Q9H4F1 302 aa11.23□□□□□ -0.61
PPP4R1-220ENST00000581835 MRPL17Q9NRX2 175 aaKnown RBP11.23□□□□□ -0.61
PPP4R1-220ENST00000581835 CHST7Q9NS84 486 aa11.23□□□□□ -0.61
PPP4R1-220ENST00000581835 RCOR1Q9UKL0 485 aa11.23□□□□□ -0.61
PPP4R1-220ENST00000581835 PCDHA7Q9UN72 937 aa11.23□□□□□ -0.61
PPP4R1-220ENST00000581835 SSX2IPQ9Y2D8 614 aa11.23□□□□□ -0.61
PPP4R1-220ENST00000581835 PLXNA3P51805 1871 aa11.23□□□□□ -0.61
PPP4R1-220ENST00000581835 C2CD2LO14523 706 aa11.22□□□□□ -0.61
PPP4R1-220ENST00000581835 HNRNPDLO14979 420 aaKnown RBP11.22□□□□□ -0.61
PPP4R1-220ENST00000581835 KIF4AO95239 1232 aa11.22□□□□□ -0.61
PPP4R1-220ENST00000581835 URODP06132 367 aa11.22□□□□□ -0.61
PPP4R1-220ENST00000581835 CNPP09543 421 aaKnown RBP11.22□□□□□ -0.61
PPP4R1-220ENST00000581835 ANK1P16157 1881 aa11.22□□□□□ -0.61
PPP4R1-220ENST00000581835 GLUD2P49448 558 aa11.22□□□□□ -0.61
PPP4R1-220ENST00000581835 LIG4P49917 911 aa11.22□□□□□ -0.61
PPP4R1-220ENST00000581835 DSG1Q02413 1049 aa11.22□□□□□ -0.61
PPP4R1-220ENST00000581835 SLC10A6Q3KNW5 377 aa11.22□□□□□ -0.61
PPP4R1-220ENST00000581835 USP41Q3LFD5 358 aa11.22□□□□□ -0.61
PPP4R1-220ENST00000581835 SEZ6Q53EL9 994 aa11.22□□□□□ -0.61
PPP4R1-220ENST00000581835 ZC2HC1CQ53FD0 456 aaPredicted RBP11.22□□□□□ -0.61
PPP4R1-220ENST00000581835 SLC39A4Q6P5W5 647 aa11.22□□□□□ -0.61
PPP4R1-220ENST00000581835 SYCE2Q6PIF2 218 aa11.22□□□□□ -0.61
PPP4R1-220ENST00000581835 ZNF720Q7Z2F6 126 aa11.22□□□□□ -0.61
PPP4R1-220ENST00000581835 SFR1Q86XK3 245 aa11.22□□□□□ -0.61
PPP4R1-220ENST00000581835 MAP4K3Q8IVH8 894 aa11.22□□□□□ -0.61
PPP4R1-220ENST00000581835 TMEM87AQ8NBN3 555 aa11.22□□□□□ -0.61
PPP4R1-220ENST00000581835 SLC22A17Q8WUG5 538 aa11.22□□□□□ -0.61
PPP4R1-220ENST00000581835 STRA6Q9BX79 667 aa11.22□□□□□ -0.61
PPP4R1-220ENST00000581835 EMILIN2Q9BXX0 1053 aa11.22□□□□□ -0.61
PPP4R1-220ENST00000581835 S1PR5Q9H228 398 aa11.22□□□□□ -0.61
PPP4R1-220ENST00000581835 MYO10Q9HD67 2058 aa11.22□□□□□ -0.61
PPP4R1-220ENST00000581835 CD320Q9NPF0 282 aa11.22□□□□□ -0.61
PPP4R1-220ENST00000581835 CNTN3Q9P232 1028 aa11.22□□□□□ -0.61
PPP4R1-220ENST00000581835 SEL1LQ9UBV2 794 aa11.22□□□□□ -0.61
PPP4R1-220ENST00000581835 PRKAG3Q9UGI9 489 aa11.22□□□□□ -0.61
PPP4R1-220ENST00000581835 SF3B1O75533 1304 aaKnown RBP eCLIP11.21□□□□□ -0.614e-6■■■■■ 34.5
PPP4R1-220ENST00000581835 FRMD3A2A2Y4 597 aa11.21□□□□□ -0.61
PPP4R1-220ENST00000581835 TMEM189-UBE2V1I3L0A0 370 aa11.21□□□□□ -0.61
PPP4R1-220ENST00000581835 FAM189A1O60320 539 aa11.21□□□□□ -0.61
PPP4R1-220ENST00000581835 PPP1R37O75864 691 aa11.21□□□□□ -0.61
PPP4R1-220ENST00000581835 IDEP14735 1019 aa11.21□□□□□ -0.61
PPP4R1-220ENST00000581835 KCNE1P15382 129 aa11.21□□□□□ -0.61
PPP4R1-220ENST00000581835 EPCAMP16422 314 aa11.21□□□□□ -0.61
PPP4R1-220ENST00000581835 HOXB8P17481 243 aaPredicted RBP11.21□□□□□ -0.61
PPP4R1-220ENST00000581835 GAP43P17677 238 aa11.21□□□□□ -0.61
PPP4R1-220ENST00000581835 KLRC2P26717 231 aa11.21□□□□□ -0.61
PPP4R1-220ENST00000581835 MATR3P43243 847 aaKnown RBP eCLIP11.21□□□□□ -0.619e-6■■■■□ 21.7
PPP4R1-220ENST00000581835 ME1P48163 572 aa11.21□□□□□ -0.61
PPP4R1-220ENST00000581835 CLCN4P51793 760 aa11.21□□□□□ -0.61
PPP4R1-220ENST00000581835 CLCNKBP51801 687 aa11.21□□□□□ -0.61
PPP4R1-220ENST00000581835 ZP2Q05996 745 aa11.21□□□□□ -0.61
PPP4R1-220ENST00000581835 SOX4Q06945 474 aaPredicted RBP11.21□□□□□ -0.61
PPP4R1-220ENST00000581835 UPP1Q16831 310 aa11.21□□□□□ -0.61
PPP4R1-220ENST00000581835 KIAA1841Q6NSI8 718 aa11.21□□□□□ -0.61
PPP4R1-220ENST00000581835 PPFIBP1Q86W92 1011 aa11.21□□□□□ -0.61
PPP4R1-220ENST00000581835 ADHFE1Q8IWW8 467 aa11.21□□□□□ -0.61
PPP4R1-220ENST00000581835 GPR65Q8IYL9 337 aa11.21□□□□□ -0.61
PPP4R1-220ENST00000581835 GJD3Q8N144 294 aa11.21□□□□□ -0.61
PPP4R1-220ENST00000581835 HASPINQ8TF76 798 aa11.21□□□□□ -0.61
PPP4R1-220ENST00000581835 SUSD6Q92537 303 aa11.21□□□□□ -0.61
PPP4R1-220ENST00000581835 STAMQ92783 540 aa11.21□□□□□ -0.61
PPP4R1-220ENST00000581835 DHX58Q96C10 678 aa11.21□□□□□ -0.61
PPP4R1-220ENST00000581835 B3GALT6Q96L58 329 aa11.21□□□□□ -0.61
PPP4R1-220ENST00000581835 UROC1Q96N76 676 aa11.21□□□□□ -0.61
PPP4R1-220ENST00000581835 TNMDQ9H2S6 317 aa11.21□□□□□ -0.61
PPP4R1-220ENST00000581835 CUEDC2Q9H467 287 aa11.21□□□□□ -0.61
PPP4R1-220ENST00000581835 MRPL44Q9H9J2 332 aaKnown RBP11.21□□□□□ -0.61
PPP4R1-220ENST00000581835 GOLGA2P5Q9HBQ8 144 aa11.21□□□□□ -0.61
PPP4R1-220ENST00000581835 RXFP1Q9HBX9 757 aa11.21□□□□□ -0.61
PPP4R1-220ENST00000581835 SLC38A7Q9NVC3 462 aa11.21□□□□□ -0.61
Retrieved 100 of 20,778 RNA–protein pairs in 34.8 ms