RNA–Protein interactions for RNA: ENST00000580980.1

PSMD3-205, Transcript of proteasome 26S subunit, non-ATPase 3, humanhuman

TSL 2

Gene PSMD3, Length 580 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PSMD3-205ENST00000580980 HERC4Q5GLZ8 1057 aaPredicted RBP13.35□□□□□ -0.27
PSMD3-205ENST00000580980 TMEM31Q5JXX7 168 aa13.35□□□□□ -0.27
PSMD3-205ENST00000580980 ELMSAN1Q6PJG2 1045 aa13.35□□□□□ -0.27
PSMD3-205ENST00000580980 GPBP1Q86WP2 473 aa13.35□□□□□ -0.27
PSMD3-205ENST00000580980 RNF135Q8IUD6 432 aa13.35□□□□□ -0.27
PSMD3-205ENST00000580980 LARP4BQ92615 738 aaKnown RBP13.35□□□□□ -0.27
PSMD3-205ENST00000580980 FBXL18Q96ME1 805 aa13.35□□□□□ -0.27
PSMD3-205ENST00000580980 RIPOR3Q96MK2 946 aa13.35□□□□□ -0.27
PSMD3-205ENST00000580980 UROC1Q96N76 676 aa13.35□□□□□ -0.27
PSMD3-205ENST00000580980 ACAP3Q96P50 834 aa13.35□□□□□ -0.27
PSMD3-205ENST00000580980 TCHPQ9BT92 498 aa13.35□□□□□ -0.27
PSMD3-205ENST00000580980 GPR62Q9BZJ7 368 aa13.35□□□□□ -0.27
PSMD3-205ENST00000580980 SCAND2PQ9GZW5 306 aaPredicted RBP13.35□□□□□ -0.27
PSMD3-205ENST00000580980 SFXN1Q9H9B4 322 aa13.35□□□□□ -0.27
PSMD3-205ENST00000580980 FNIP2Q9P278 1114 aa13.35□□□□□ -0.27
PSMD3-205ENST00000580980 FBXO2Q9UK22 296 aaPredicted RBP13.35□□□□□ -0.27
PSMD3-205ENST00000580980 SF3B1O75533 1304 aaKnown RBP eCLIP13.35□□□□□ -0.27
PSMD3-205ENST00000580980 NPHP3-ACAD11A0A0J9YXS1 232 aa13.34□□□□□ -0.27
PSMD3-205ENST00000580980 CASTOR2A6NHX0 329 aa13.34□□□□□ -0.27
PSMD3-205ENST00000580980 F8W810 466 aa13.34□□□□□ -0.27
PSMD3-205ENST00000580980 TMEM189-UBE2V1I3L0A0 370 aa13.34□□□□□ -0.27
PSMD3-205ENST00000580980 C2CD2LO14523 706 aa13.34□□□□□ -0.27
PSMD3-205ENST00000580980 TEX28O15482 410 aa13.34□□□□□ -0.27
PSMD3-205ENST00000580980 MARCKSP29966 332 aaPredicted RBP13.34□□□□□ -0.27
PSMD3-205ENST00000580980 TXLNAP40222 546 aa13.34□□□□□ -0.27
PSMD3-205ENST00000580980 MCM6Q14566 821 aa13.34□□□□□ -0.27
PSMD3-205ENST00000580980 SLC39A14Q15043 492 aa13.34□□□□□ -0.27
PSMD3-205ENST00000580980 ATAT1Q5SQI0 421 aa13.34□□□□□ -0.27
PSMD3-205ENST00000580980 PDXDC1Q6P996 788 aa13.34□□□□□ -0.27
PSMD3-205ENST00000580980 DCLRE1AQ6PJP8 1040 aa13.34□□□□□ -0.27
PSMD3-205ENST00000580980 ALKAL1Q6UXT8 129 aa13.34□□□□□ -0.27
PSMD3-205ENST00000580980 HAUS6Q7Z4H7 955 aa13.34□□□□□ -0.27
PSMD3-205ENST00000580980 LINC00301Q8NCQ3 95 aa13.34□□□□□ -0.27
PSMD3-205ENST00000580980 CMASQ8NFW8 434 aaPredicted RBP13.34□□□□□ -0.27
PSMD3-205ENST00000580980 KCNG4Q8TDN1 519 aa13.34□□□□□ -0.27
PSMD3-205ENST00000580980 HDAC7Q8WUI4 952 aa13.34□□□□□ -0.27
PSMD3-205ENST00000580980 EPSTI1Q96J88 318 aa13.34□□□□□ -0.27
PSMD3-205ENST00000580980 RPGRIP1Q96KN7 1286 aa13.34□□□□□ -0.27
PSMD3-205ENST00000580980 PPP1R10Q96QC0 940 aaKnown RBP13.34□□□□□ -0.27
PSMD3-205ENST00000580980 REEP2Q9BRK0 252 aa13.34□□□□□ -0.27
PSMD3-205ENST00000580980 APOL5Q9BWW9 433 aa13.34□□□□□ -0.27
PSMD3-205ENST00000580980 CXCL16Q9H2A7 254 aa13.34□□□□□ -0.27
PSMD3-205ENST00000580980 PARVGQ9HBI0 331 aa13.34□□□□□ -0.27
PSMD3-205ENST00000580980 SLC38A7Q9NVC3 462 aa13.34□□□□□ -0.27
PSMD3-205ENST00000580980 STK17AQ9UEE5 414 aa13.34□□□□□ -0.27
PSMD3-205ENST00000580980 NR2E1Q9Y466 385 aa13.34□□□□□ -0.27
PSMD3-205ENST00000580980 TDRD15B5MCY1 1934 aaKnown RBP13.34□□□□□ -0.27
PSMD3-205ENST00000580980 MYH15Q9Y2K3 1946 aa13.34□□□□□ -0.27
PSMD3-205ENST00000580980 SMIM28A0A1B0GU29 152 aa13.33□□□□□ -0.28
PSMD3-205ENST00000580980 PPP6R2O75170 966 aa13.33□□□□□ -0.28
PSMD3-205ENST00000580980 FAM13AO94988 1023 aa13.33□□□□□ -0.28
PSMD3-205ENST00000580980 GLUD1P00367 558 aa13.33□□□□□ -0.28
PSMD3-205ENST00000580980 KRT18P05783 430 aaKnown RBP13.33□□□□□ -0.28
PSMD3-205ENST00000580980 KCNE1P15382 129 aa13.33□□□□□ -0.28
PSMD3-205ENST00000580980 CACNB1Q02641 598 aaPredicted RBP13.33□□□□□ -0.28
PSMD3-205ENST00000580980 MCL1Q07820 350 aa13.33□□□□□ -0.28
PSMD3-205ENST00000580980 DHX8Q14562 1220 aaKnown RBP13.33□□□□□ -0.28
PSMD3-205ENST00000580980 RARS2Q5T160 578 aaKnown RBP13.33□□□□□ -0.28
PSMD3-205ENST00000580980 CYP26C1Q6V0L0 522 aa13.33□□□□□ -0.28
PSMD3-205ENST00000580980 C15orf39Q6ZRI6 1047 aa13.33□□□□□ -0.28
PSMD3-205ENST00000580980 ZBTB33Q86T24 672 aa13.33□□□□□ -0.28
PSMD3-205ENST00000580980 MYCT1Q8N699 235 aa13.33□□□□□ -0.28
PSMD3-205ENST00000580980 KRI1Q8N9T8 703 aaKnown RBP13.33□□□□□ -0.28
PSMD3-205ENST00000580980 LRRC15Q8TF66 581 aa13.33□□□□□ -0.28
PSMD3-205ENST00000580980 DDX27Q96GQ7 796 aaKnown RBP13.33□□□□□ -0.28
PSMD3-205ENST00000580980 GBP4Q96PP9 640 aa13.33□□□□□ -0.28
PSMD3-205ENST00000580980 PAAF1Q9BRP4 392 aa13.33□□□□□ -0.28
PSMD3-205ENST00000580980 LRFN3Q9BTN0 628 aa13.33□□□□□ -0.28
PSMD3-205ENST00000580980 TTPALQ9BTX7 342 aa13.33□□□□□ -0.28
PSMD3-205ENST00000580980 RHOBTB2Q9BYZ6 727 aa13.33□□□□□ -0.28
PSMD3-205ENST00000580980 C11orf16Q9NQ32 467 aa13.33□□□□□ -0.28
PSMD3-205ENST00000580980 RCOR1Q9UKL0 485 aa13.33□□□□□ -0.28
PSMD3-205ENST00000580980 GTF3C5Q9Y5Q8 519 aaPredicted RBP13.33□□□□□ -0.28
PSMD3-205ENST00000580980 BDP1A6H8Y1 2624 aa13.33□□□□□ -0.28
PSMD3-205ENST00000580980 SPDYE4A6NLX3 237 aa13.32□□□□□ -0.28
PSMD3-205ENST00000580980 PRR33A8MZF0 331 aa13.32□□□□□ -0.28
PSMD3-205ENST00000580980 CLDN3O15551 220 aa13.32□□□□□ -0.28
PSMD3-205ENST00000580980 TRAPPC3O43617 180 aa13.32□□□□□ -0.28
PSMD3-205ENST00000580980 TRAK2O60296 914 aa13.32□□□□□ -0.28
PSMD3-205ENST00000580980 TBCAO75347 108 aaKnown RBP13.32□□□□□ -0.28
PSMD3-205ENST00000580980 KIF4AO95239 1232 aa13.32□□□□□ -0.28
PSMD3-205ENST00000580980 PAPLNO95428 1278 aa13.32□□□□□ -0.28
PSMD3-205ENST00000580980 PIGRP01833 764 aa13.32□□□□□ -0.28
PSMD3-205ENST00000580980 OSTNP61366 133 aa13.32□□□□□ -0.28
PSMD3-205ENST00000580980 CEBPZQ03701 1054 aaKnown RBP13.32□□□□□ -0.28
PSMD3-205ENST00000580980 NOLC1Q14978 699 aaKnown RBP eCLIP13.32□□□□□ -0.28
PSMD3-205ENST00000580980 KYAT1Q16773 422 aa13.32□□□□□ -0.28
PSMD3-205ENST00000580980 UPP1Q16831 310 aa13.32□□□□□ -0.28
PSMD3-205ENST00000580980 SPECC1Q5M775 1068 aa13.32□□□□□ -0.28
PSMD3-205ENST00000580980 RRAGBQ5VZM2 374 aa13.32□□□□□ -0.28
PSMD3-205ENST00000580980 USP49Q70CQ1 688 aa13.32□□□□□ -0.28
PSMD3-205ENST00000580980 GPR149Q86SP6 731 aa13.32□□□□□ -0.28
PSMD3-205ENST00000580980 C12orf76Q8N812 135 aaPredicted RBP13.32□□□□□ -0.28
PSMD3-205ENST00000580980 CEP120Q8N960 986 aa13.32□□□□□ -0.28
PSMD3-205ENST00000580980 RIN2Q8WYP3 895 aaPredicted RBP13.32□□□□□ -0.28
PSMD3-205ENST00000580980 PIK3R5Q8WYR1 880 aa13.32□□□□□ -0.28
PSMD3-205ENST00000580980 RABGGTAQ92696 567 aa13.32□□□□□ -0.28
PSMD3-205ENST00000580980 ZBTB45Q96K62 511 aaPredicted RBP13.32□□□□□ -0.28
PSMD3-205ENST00000580980 SNX27Q96L92 541 aa13.32□□□□□ -0.28
PSMD3-205ENST00000580980 PLEKHA4Q9H4M7 779 aa13.32□□□□□ -0.28
Retrieved 100 of 20,778 RNA–protein pairs in 63 ms