RNA–Protein interactions for RNA: ENST00000566409.1

FANCA-220, Transcript of FA complementation group A, humanhuman

TSL 1 (best)

Gene FANCA, Length 395 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FANCA-220ENST00000566409 ATAT1Q5SQI0 421 aa16.08■□□□□ 0.16
FANCA-220ENST00000566409 KIAA1841Q6NSI8 718 aa16.08■□□□□ 0.16
FANCA-220ENST00000566409 GPR149Q86SP6 731 aa16.08■□□□□ 0.16
FANCA-220ENST00000566409 ZMAT2Q96NC0 199 aaKnown RBP16.08■□□□□ 0.16
FANCA-220ENST00000566409 NECTIN4Q96NY8 510 aa16.08■□□□□ 0.16
FANCA-220ENST00000566409 REEP2Q9BRK0 252 aa16.08■□□□□ 0.16
FANCA-220ENST00000566409 MAN1C1Q9NR34 630 aa16.08■□□□□ 0.16
FANCA-220ENST00000566409 MTMR6Q9Y217 621 aa16.08■□□□□ 0.16
FANCA-220ENST00000566409 SSX2IPQ9Y2D8 614 aa16.08■□□□□ 0.16
FANCA-220ENST00000566409 SMIM28A0A1B0GU29 152 aa16.07■□□□□ 0.16
FANCA-220ENST00000566409 C2CD4DB7Z1M9 353 aa16.07■□□□□ 0.16
FANCA-220ENST00000566409 K7ELQ4 463 aaPredicted RBP16.07■□□□□ 0.16
FANCA-220ENST00000566409 BRD1O95696 1058 aa16.07■□□□□ 0.16
FANCA-220ENST00000566409 ADH1AP07327 375 aa16.07■□□□□ 0.16
FANCA-220ENST00000566409 SPATA31D3P0C874 917 aa16.07■□□□□ 0.16
FANCA-220ENST00000566409 MARCKSP29966 332 aaPredicted RBP16.07■□□□□ 0.16
FANCA-220ENST00000566409 ZXDAP98168 799 aa16.07■□□□□ 0.16
FANCA-220ENST00000566409 SOX4Q06945 474 aaPredicted RBP16.07■□□□□ 0.16
FANCA-220ENST00000566409 DHX8Q14562 1220 aaKnown RBP16.07■□□□□ 0.16
FANCA-220ENST00000566409 MCM6Q14566 821 aa16.07■□□□□ 0.16
FANCA-220ENST00000566409 SPECC1Q5M775 1068 aa16.07■□□□□ 0.16
FANCA-220ENST00000566409 LILRA6Q6PI73 481 aa16.07■□□□□ 0.16
FANCA-220ENST00000566409 PRSS55Q6UWB4 352 aaPredicted RBP16.07■□□□□ 0.16
FANCA-220ENST00000566409 SPATA31D4Q6ZUB0 917 aa16.07■□□□□ 0.16
FANCA-220ENST00000566409 HFE2Q6ZVN8 426 aa16.07■□□□□ 0.16
FANCA-220ENST00000566409 GPBP1Q86WP2 473 aa16.07■□□□□ 0.16
FANCA-220ENST00000566409 PALB2Q86YC2 1186 aa16.07■□□□□ 0.16
FANCA-220ENST00000566409 GPR65Q8IYL9 337 aa16.07■□□□□ 0.16
FANCA-220ENST00000566409 RIN2Q8WYP3 895 aaPredicted RBP16.07■□□□□ 0.16
FANCA-220ENST00000566409 CALML4Q96GE6 196 aa16.07■□□□□ 0.16
FANCA-220ENST00000566409 EPSTI1Q96J88 318 aa16.07■□□□□ 0.16
FANCA-220ENST00000566409 RIPOR3Q96MK2 946 aa16.07■□□□□ 0.16
FANCA-220ENST00000566409 HAPLN2Q9GZV7 340 aa16.07■□□□□ 0.16
FANCA-220ENST00000566409 SFXN1Q9H9B4 322 aa16.07■□□□□ 0.16
FANCA-220ENST00000566409 GOLGA2P5Q9HBQ8 144 aa16.07■□□□□ 0.16
FANCA-220ENST00000566409 FNIP2Q9P278 1114 aa16.07■□□□□ 0.16
FANCA-220ENST00000566409 DAXXQ9UER7 740 aaPredicted RBP16.07■□□□□ 0.16
FANCA-220ENST00000566409 FBXO2Q9UK22 296 aaPredicted RBP16.07■□□□□ 0.16
FANCA-220ENST00000566409 DOCK8Q8NF50 2099 aa16.06■□□□□ 0.16
FANCA-220ENST00000566409 MYH15Q9Y2K3 1946 aa16.06■□□□□ 0.16
FANCA-220ENST00000566409 SF3B1O75533 1304 aaKnown RBP eCLIP16.06■□□□□ 0.162e-7■■■■■ 120.6
FANCA-220ENST00000566409 TGM5O43548 720 aa16.06■□□□□ 0.16
FANCA-220ENST00000566409 MCF2P10911 925 aa16.06■□□□□ 0.16
FANCA-220ENST00000566409 CLCNKBP51801 687 aa16.06■□□□□ 0.16
FANCA-220ENST00000566409 ZNF131P52739 623 aa16.06■□□□□ 0.16
FANCA-220ENST00000566409 SMTNP53814 917 aa16.06■□□□□ 0.16
FANCA-220ENST00000566409 NCKAP1LP55160 1127 aa16.06■□□□□ 0.16
FANCA-220ENST00000566409 SEZ6Q53EL9 994 aa16.06■□□□□ 0.16
FANCA-220ENST00000566409 FAM171A1Q5VUB5 890 aa16.06■□□□□ 0.16
FANCA-220ENST00000566409 MPZL3Q6UWV2 235 aa16.06■□□□□ 0.16
FANCA-220ENST00000566409 GLYCTKQ8IVS8 523 aa16.06■□□□□ 0.16
FANCA-220ENST00000566409 C3orf58Q8NDZ4 430 aa16.06■□□□□ 0.16
FANCA-220ENST00000566409 LNX1Q8TBB1 728 aaPredicted RBP16.06■□□□□ 0.16
FANCA-220ENST00000566409 RAD54LQ92698 747 aa16.06■□□□□ 0.16
FANCA-220ENST00000566409 KCNN1Q92952 543 aa16.06■□□□□ 0.16
FANCA-220ENST00000566409 CLIC6Q96NY7 704 aa16.06■□□□□ 0.16
FANCA-220ENST00000566409 CLSTN3Q9BQT9 956 aa16.06■□□□□ 0.16
FANCA-220ENST00000566409 TCHPQ9BT92 498 aa16.06■□□□□ 0.16
FANCA-220ENST00000566409 CCSER1Q9C0I3 900 aa16.06■□□□□ 0.16
FANCA-220ENST00000566409 TSHZ2Q9NRE2 1034 aa16.06■□□□□ 0.16
FANCA-220ENST00000566409 ADAM12O43184 909 aa16.05■□□□□ 0.16
FANCA-220ENST00000566409 TOM1L1O75674 476 aa16.05■□□□□ 0.16
FANCA-220ENST00000566409 RFPL2O75678 378 aa16.05■□□□□ 0.16
FANCA-220ENST00000566409 PAPLNO95428 1278 aa16.05■□□□□ 0.16
FANCA-220ENST00000566409 GLUD1P00367 558 aa16.05■□□□□ 0.16
FANCA-220ENST00000566409 CEBPZQ03701 1054 aaKnown RBP16.05■□□□□ 0.16
FANCA-220ENST00000566409 UPP1Q16831 310 aa16.05■□□□□ 0.16
FANCA-220ENST00000566409 DCLRE1AQ6PJP8 1040 aa16.05■□□□□ 0.16
FANCA-220ENST00000566409 TRIM67Q6ZTA4 783 aa16.05■□□□□ 0.16
FANCA-220ENST00000566409 HAUS6Q7Z4H7 955 aa16.05■□□□□ 0.16
FANCA-220ENST00000566409 APBB1IPQ7Z5R6 666 aaPredicted RBP16.05■□□□□ 0.16
FANCA-220ENST00000566409 CMASQ8NFW8 434 aaPredicted RBP16.05■□□□□ 0.16
FANCA-220ENST00000566409 SNX27Q96L92 541 aa16.05■□□□□ 0.16
FANCA-220ENST00000566409 FIZ1Q96SL8 496 aa16.05■□□□□ 0.16
FANCA-220ENST00000566409 TTPALQ9BTX7 342 aa16.05■□□□□ 0.16
FANCA-220ENST00000566409 CCDC94Q9BW85 323 aaPredicted RBP16.05■□□□□ 0.16
FANCA-220ENST00000566409 APOBEC3CQ9NRW3 190 aaKnown RBP eCLIP16.05■□□□□ 0.16
FANCA-220ENST00000566409 KCNG1Q9UIX4 513 aa16.05■□□□□ 0.16
FANCA-220ENST00000566409 ODF2LQ9ULJ1 636 aa16.05■□□□□ 0.16
FANCA-220ENST00000566409 NR2E1Q9Y466 385 aa16.05■□□□□ 0.16
FANCA-220ENST00000566409 SRPRBQ9Y5M8 271 aaKnown RBP16.05■□□□□ 0.16
FANCA-220ENST00000566409 CCDC195A0A1B0GUA6 201 aa16.04■□□□□ 0.16
FANCA-220ENST00000566409 TMEM189-UBE2V1I3L0A0 370 aa16.04■□□□□ 0.16
FANCA-220ENST00000566409 B3GAT3O94766 335 aa16.04■□□□□ 0.16
FANCA-220ENST00000566409 C1RP00736 705 aa16.04■□□□□ 0.16
FANCA-220ENST00000566409 HARSP12081 509 aaKnown RBP16.04■□□□□ 0.16
FANCA-220ENST00000566409 KCNE1P15382 129 aa16.04■□□□□ 0.16
FANCA-220ENST00000566409 DDIT3P35638 169 aa16.04■□□□□ 0.16
FANCA-220ENST00000566409 STRN3Q13033 797 aa16.04■□□□□ 0.16
FANCA-220ENST00000566409 PTPN21Q16825 1174 aa16.04■□□□□ 0.16
FANCA-220ENST00000566409 SLC10A6Q3KNW5 377 aa16.04■□□□□ 0.16
FANCA-220ENST00000566409 ZPBP2Q6X784 338 aa16.04■□□□□ 0.16
FANCA-220ENST00000566409 C15orf39Q6ZRI6 1047 aa16.04■□□□□ 0.16
FANCA-220ENST00000566409 CEP57Q86XR8 500 aa16.04■□□□□ 0.16
FANCA-220ENST00000566409 TMEM130Q8N3G9 435 aa16.04■□□□□ 0.16
FANCA-220ENST00000566409 PIK3R5Q8WYR1 880 aa16.04■□□□□ 0.16
FANCA-220ENST00000566409 C18orf25Q96B23 403 aaPredicted RBP16.04■□□□□ 0.16
FANCA-220ENST00000566409 ZNF707Q96C28 371 aaPredicted RBP16.04■□□□□ 0.16
FANCA-220ENST00000566409 ACAP3Q96P50 834 aa16.04■□□□□ 0.16
FANCA-220ENST00000566409 USP28Q96RU2 1077 aa16.04■□□□□ 0.16
Retrieved 100 of 20,778 RNA–protein pairs in 53.4 ms