RNA–Protein interactions for RNA: ENST00000562373.1

NR4A1-219, Transcript of nuclear receptor subfamily 4 group A member 1, humanhuman

TSL 3

Gene NR4A1, Length 838 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NR4A1-219ENST00000562373 KIAA0319Q5VV43 1072 aa23.08■■□□□ 1.29
NR4A1-219ENST00000562373 APBB1IPQ7Z5R6 666 aaPredicted RBP23.08■■□□□ 1.29
NR4A1-219ENST00000562373 CASP10Q92851 521 aa23.08■■□□□ 1.29
NR4A1-219ENST00000562373 BICD1Q96G01 975 aa23.08■■□□□ 1.29
NR4A1-219ENST00000562373 ACAP3Q96P50 834 aa23.08■■□□□ 1.29
NR4A1-219ENST00000562373 FIZ1Q96SL8 496 aa23.08■■□□□ 1.29
NR4A1-219ENST00000562373 STK17AQ9UEE5 414 aa23.08■■□□□ 1.29
NR4A1-219ENST00000562373 TBX20Q9UMR3 447 aa23.08■■□□□ 1.29
NR4A1-219ENST00000562373 MORC2Q9Y6X9 1032 aaPredicted RBP23.08■■□□□ 1.29
NR4A1-219ENST00000562373 ZMYM2Q9UBW7 1377 aa23.08■■□□□ 1.29
NR4A1-219ENST00000562373 NCOR1O75376 2440 aa23.08■■□□□ 1.28
NR4A1-219ENST00000562373 SMIM28A0A1B0GU29 152 aa23.07■■□□□ 1.28
NR4A1-219ENST00000562373 TBCAO75347 108 aaKnown RBP23.07■■□□□ 1.28
NR4A1-219ENST00000562373 TOM1L1O75674 476 aa23.07■■□□□ 1.28
NR4A1-219ENST00000562373 KIF4AO95239 1232 aa23.07■■□□□ 1.28
NR4A1-219ENST00000562373 URODP06132 367 aa23.07■■□□□ 1.28
NR4A1-219ENST00000562373 YARSP54577 528 aaKnown RBP23.07■■□□□ 1.28
NR4A1-219ENST00000562373 ALKAL1Q6UXT8 129 aa23.07■■□□□ 1.28
NR4A1-219ENST00000562373 SV2BQ7L1I2 683 aa23.07■■□□□ 1.28
NR4A1-219ENST00000562373 ADHFE1Q8IWW8 467 aa23.07■■□□□ 1.28
NR4A1-219ENST00000562373 TMEM130Q8N3G9 435 aa23.07■■□□□ 1.28
NR4A1-219ENST00000562373 DDX12PQ92771 950 aa23.07■■□□□ 1.28
NR4A1-219ENST00000562373 STAMQ92783 540 aa23.07■■□□□ 1.28
NR4A1-219ENST00000562373 CHAMP1Q96JM3 812 aa23.07■■□□□ 1.28
NR4A1-219ENST00000562373 ZMAT2Q96NC0 199 aaKnown RBP23.07■■□□□ 1.28
NR4A1-219ENST00000562373 PPP1R10Q96QC0 940 aaKnown RBP23.07■■□□□ 1.28
NR4A1-219ENST00000562373 EMILIN2Q9BXX0 1053 aa23.07■■□□□ 1.28
NR4A1-219ENST00000562373 IKZF4Q9H2S9 585 aa23.07■■□□□ 1.28
NR4A1-219ENST00000562373 FSD2A1L4K1 749 aa23.06■■□□□ 1.28
NR4A1-219ENST00000562373 PPP6R2O75170 966 aa23.06■■□□□ 1.28
NR4A1-219ENST00000562373 SRGAP2BP0DMP2 458 aa23.06■■□□□ 1.28
NR4A1-219ENST00000562373 STAT6P42226 847 aa23.06■■□□□ 1.28
NR4A1-219ENST00000562373 GLUD2P49448 558 aa23.06■■□□□ 1.28
NR4A1-219ENST00000562373 SOX4Q06945 474 aaPredicted RBP23.06■■□□□ 1.28
NR4A1-219ENST00000562373 RARS2Q5T160 578 aaKnown RBP23.06■■□□□ 1.28
NR4A1-219ENST00000562373 KIAA1841Q6NSI8 718 aa23.06■■□□□ 1.28
NR4A1-219ENST00000562373 SFR1Q86XK3 245 aa23.06■■□□□ 1.28
NR4A1-219ENST00000562373 GLYCTKQ8IVS8 523 aa23.06■■□□□ 1.28
NR4A1-219ENST00000562373 CHST7Q9NS84 486 aa23.06■■□□□ 1.28
NR4A1-219ENST00000562373 TBC1D7Q9P0N9 293 aa23.06■■□□□ 1.28
NR4A1-219ENST00000562373 C19orf67A6NJJ6 358 aa23.05■■□□□ 1.28
NR4A1-219ENST00000562373 H0YCG3 227 aa23.05■■□□□ 1.28
NR4A1-219ENST00000562373 TEX28O15482 410 aa23.05■■□□□ 1.28
NR4A1-219ENST00000562373 CLDN3O15551 220 aa23.05■■□□□ 1.28
NR4A1-219ENST00000562373 YEATS4O95619 227 aa23.05■■□□□ 1.28
NR4A1-219ENST00000562373 BRD1O95696 1058 aa23.05■■□□□ 1.28
NR4A1-219ENST00000562373 RPL17P18621 184 aaKnown RBP23.05■■□□□ 1.28
NR4A1-219ENST00000562373 LIG4P49917 911 aa23.05■■□□□ 1.28
NR4A1-219ENST00000562373 CLCNKBP51801 687 aa23.05■■□□□ 1.28
NR4A1-219ENST00000562373 DSG1Q02413 1049 aa23.05■■□□□ 1.28
NR4A1-219ENST00000562373 DNM1Q05193 864 aaKnown RBP23.05■■□□□ 1.28
NR4A1-219ENST00000562373 NOLC1Q14978 699 aaKnown RBP eCLIP23.05■■□□□ 1.28
NR4A1-219ENST00000562373 SHC4Q6S5L8 630 aa23.05■■□□□ 1.28
NR4A1-219ENST00000562373 PRSS55Q6UWB4 352 aaPredicted RBP23.05■■□□□ 1.28
NR4A1-219ENST00000562373 ZPBP2Q6X784 338 aa23.05■■□□□ 1.28
NR4A1-219ENST00000562373 CCDC73Q6ZRK6 1079 aa23.05■■□□□ 1.28
NR4A1-219ENST00000562373 CEP57Q86XR8 500 aa23.05■■□□□ 1.28
NR4A1-219ENST00000562373 RIN2Q8WYP3 895 aaPredicted RBP23.05■■□□□ 1.28
NR4A1-219ENST00000562373 SUSD6Q92537 303 aa23.05■■□□□ 1.28
NR4A1-219ENST00000562373 DNAJC19Q96DA6 116 aa23.05■■□□□ 1.28
NR4A1-219ENST00000562373 SNX27Q96L92 541 aa23.05■■□□□ 1.28
NR4A1-219ENST00000562373 PRKAG3Q9UGI9 489 aa23.05■■□□□ 1.28
NR4A1-219ENST00000562373 MUC3AQ02505 3323 aa23.04■■□□□ 1.28
NR4A1-219ENST00000562373 ANKRD63C9JTQ0 380 aa23.04■■□□□ 1.28
NR4A1-219ENST00000562373 SPATA31D3P0C874 917 aa23.04■■□□□ 1.28
NR4A1-219ENST00000562373 TNFSF9P41273 254 aa23.04■■□□□ 1.28
NR4A1-219ENST00000562373 CLCN4P51793 760 aa23.04■■□□□ 1.28
NR4A1-219ENST00000562373 SPAG1Q07617 926 aa23.04■■□□□ 1.28
NR4A1-219ENST00000562373 MCL1Q07820 350 aa23.04■■□□□ 1.28
NR4A1-219ENST00000562373 SLC10A6Q3KNW5 377 aa23.04■■□□□ 1.28
NR4A1-219ENST00000562373 USP41Q3LFD5 358 aa23.04■■□□□ 1.28
NR4A1-219ENST00000562373 XKR4Q5GH76 650 aa23.04■■□□□ 1.28
NR4A1-219ENST00000562373 RTP2Q5QGT7 225 aa23.04■■□□□ 1.28
NR4A1-219ENST00000562373 ZBTB41Q5SVQ8 909 aa23.04■■□□□ 1.28
NR4A1-219ENST00000562373 SLC39A4Q6P5W5 647 aa23.04■■□□□ 1.28
NR4A1-219ENST00000562373 CD300LGQ6UXG3 332 aa23.04■■□□□ 1.28
NR4A1-219ENST00000562373 SPATA31D4Q6ZUB0 917 aa23.04■■□□□ 1.28
NR4A1-219ENST00000562373 C18orf25Q96B23 403 aaPredicted RBP23.04■■□□□ 1.28
NR4A1-219ENST00000562373 RPGRIP1Q96KN7 1286 aa23.04■■□□□ 1.28
NR4A1-219ENST00000562373 STK39Q9UEW8 545 aa23.04■■□□□ 1.28
NR4A1-219ENST00000562373 C5orf42Q9H799 3197 aa23.04■■□□□ 1.28
NR4A1-219ENST00000562373 TISP43B9A030 160 aa23.03■■□□□ 1.28
NR4A1-219ENST00000562373 CUTAO60888 179 aa23.03■■□□□ 1.28
NR4A1-219ENST00000562373 HOXB8P17481 243 aaPredicted RBP23.03■■□□□ 1.28
NR4A1-219ENST00000562373 SP100P23497 879 aaPredicted RBP23.03■■□□□ 1.28
NR4A1-219ENST00000562373 GTF2BQ00403 316 aa23.03■■□□□ 1.28
NR4A1-219ENST00000562373 AXDND1Q5T1B0 1012 aaPredicted RBP23.03■■□□□ 1.28
NR4A1-219ENST00000562373 FAM171A1Q5VUB5 890 aa23.03■■□□□ 1.28
NR4A1-219ENST00000562373 PALB2Q86YC2 1186 aa23.03■■□□□ 1.28
NR4A1-219ENST00000562373 C3orf58Q8NDZ4 430 aa23.03■■□□□ 1.28
NR4A1-219ENST00000562373 RXFP1Q9HBX9 757 aa23.03■■□□□ 1.28
NR4A1-219ENST00000562373 TOPORSQ9NS56 1045 aaPredicted RBP23.03■■□□□ 1.28
NR4A1-219ENST00000562373 ZDHHC9Q9Y397 364 aa23.03■■□□□ 1.28
NR4A1-219ENST00000562373 I3L4J1 428 aa23.02■■□□□ 1.28
NR4A1-219ENST00000562373 HNRNPDLO14979 420 aaKnown RBP23.02■■□□□ 1.28
NR4A1-219ENST00000562373 B3GAT3O94766 335 aa23.02■■□□□ 1.28
NR4A1-219ENST00000562373 CXCL8P10145 99 aa23.02■■□□□ 1.28
NR4A1-219ENST00000562373 IDEP14735 1019 aa23.02■■□□□ 1.28
NR4A1-219ENST00000562373 BRCC3P46736 316 aa23.02■■□□□ 1.28
NR4A1-219ENST00000562373 TPRNQ4KMQ1 711 aa23.02■■□□□ 1.28
Retrieved 100 of 20,778 RNA–protein pairs in 15.1 ms