RNA–Protein interactions for RNA: ENST00000560730.5

USP8-212, Transcript of ubiquitin specific peptidase 8, humanhuman

TSL 1 (best)

Gene USP8, Length 1,449 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP8-212ENST00000560730 CCDC65Q8IXS2 484 aa13.22□□□□□ -0.29
USP8-212ENST00000560730 VPS52Q8N1B4 723 aa13.22□□□□□ -0.29
USP8-212ENST00000560730 ZMAT2Q96NC0 199 aaKnown RBP13.22□□□□□ -0.29
USP8-212ENST00000560730 ACAP3Q96P50 834 aa13.22□□□□□ -0.29
USP8-212ENST00000560730 PPP1R10Q96QC0 940 aaKnown RBP13.22□□□□□ -0.29
USP8-212ENST00000560730 UBE2ZQ9H832 354 aaPredicted RBP13.22□□□□□ -0.29
USP8-212ENST00000560730 ENTPD7Q9NQZ7 604 aa13.22□□□□□ -0.29
USP8-212ENST00000560730 OLFML3Q9NRN5 406 aa13.22□□□□□ -0.29
USP8-212ENST00000560730 A0A0B4J269 797 aa13.21□□□□□ -0.3
USP8-212ENST00000560730 FAM237AA0A1B0GTK4 181 aa13.21□□□□□ -0.3
USP8-212ENST00000560730 A0A1W2PQ27 194 aa13.21□□□□□ -0.3
USP8-212ENST00000560730 A0A1W2PQ64 194 aa13.21□□□□□ -0.3
USP8-212ENST00000560730 A0A1W2PQD8 194 aa13.21□□□□□ -0.3
USP8-212ENST00000560730 CASTOR2A6NHX0 329 aa13.21□□□□□ -0.3
USP8-212ENST00000560730 PRPF6O94906 941 aaKnown RBP13.21□□□□□ -0.3
USP8-212ENST00000560730 GCNT3O95395 438 aa13.21□□□□□ -0.3
USP8-212ENST00000560730 CXCL14O95715 111 aa13.21□□□□□ -0.3
USP8-212ENST00000560730 EFEMP2O95967 443 aa13.21□□□□□ -0.3
USP8-212ENST00000560730 LTBRP36941 435 aa13.21□□□□□ -0.3
USP8-212ENST00000560730 YARSP54577 528 aaKnown RBP13.21□□□□□ -0.3
USP8-212ENST00000560730 SOX4Q06945 474 aaPredicted RBP13.21□□□□□ -0.3
USP8-212ENST00000560730 DLX2Q07687 328 aaPredicted RBP13.21□□□□□ -0.3
USP8-212ENST00000560730 TUSC3Q13454 348 aa13.21□□□□□ -0.3
USP8-212ENST00000560730 SLC10A6Q3KNW5 377 aa13.21□□□□□ -0.3
USP8-212ENST00000560730 XKR4Q5GH76 650 aa13.21□□□□□ -0.3
USP8-212ENST00000560730 L1TD1Q5T7N2 865 aaKnown RBP13.21□□□□□ -0.3
USP8-212ENST00000560730 PDE12Q6L8Q7 609 aaKnown RBP13.21□□□□□ -0.3
USP8-212ENST00000560730 EP400NLQ6ZTU2 488 aa13.21□□□□□ -0.3
USP8-212ENST00000560730 TMEM130Q8N3G9 435 aa13.21□□□□□ -0.3
USP8-212ENST00000560730 FSIP1Q8NA03 581 aa13.21□□□□□ -0.3
USP8-212ENST00000560730 PAGE5Q96GU1 130 aa13.21□□□□□ -0.3
USP8-212ENST00000560730 SNX27Q96L92 541 aa13.21□□□□□ -0.3
USP8-212ENST00000560730 LRRC27Q9C0I9 530 aa13.21□□□□□ -0.3
USP8-212ENST00000560730 ZBP1Q9H171 429 aa13.21□□□□□ -0.3
USP8-212ENST00000560730 TLE6Q9H808 572 aa13.21□□□□□ -0.3
USP8-212ENST00000560730 MAGEF1Q9HAY2 307 aa13.21□□□□□ -0.3
USP8-212ENST00000560730 GOLGA2P5Q9HBQ8 144 aa13.21□□□□□ -0.3
USP8-212ENST00000560730 COG5Q9UP83 839 aa13.21□□□□□ -0.3
USP8-212ENST00000560730 VWA8A3KMH1 1905 aa13.2□□□□□ -0.3
USP8-212ENST00000560730 CARNS1A5YM72 827 aa13.2□□□□□ -0.3
USP8-212ENST00000560730 C2orf71A6NGG8 1288 aa13.2□□□□□ -0.3
USP8-212ENST00000560730 OGTO15294 1046 aa13.2□□□□□ -0.3
USP8-212ENST00000560730 CXCL8P10145 99 aa13.2□□□□□ -0.3
USP8-212ENST00000560730 KCNA5P22460 613 aa13.2□□□□□ -0.3
USP8-212ENST00000560730 ADSSP30520 456 aa13.2□□□□□ -0.3
USP8-212ENST00000560730 SYKP43405 635 aa13.2□□□□□ -0.3
USP8-212ENST00000560730 KCNQ1P51787 676 aa13.2□□□□□ -0.3
USP8-212ENST00000560730 ADAM15Q13444 863 aa13.2□□□□□ -0.3
USP8-212ENST00000560730 CTC1Q2NKJ3 1217 aa13.2□□□□□ -0.3
USP8-212ENST00000560730 CEP57L1Q8IYX8 460 aa13.2□□□□□ -0.3
USP8-212ENST00000560730 MRPL43Q8N983 215 aaKnown RBP13.2□□□□□ -0.3
USP8-212ENST00000560730 VN1R2Q8NFZ6 395 aa13.2□□□□□ -0.3
USP8-212ENST00000560730 HVCN1Q96D96 273 aa13.2□□□□□ -0.3
USP8-212ENST00000560730 PABPC5Q96DU9 382 aaKnown RBP13.2□□□□□ -0.3
USP8-212ENST00000560730 ACCSQ96QU6 501 aa13.2□□□□□ -0.3
USP8-212ENST00000560730 COLEC11Q9BWP8 271 aa13.2□□□□□ -0.3
USP8-212ENST00000560730 GPR62Q9BZJ7 368 aa13.2□□□□□ -0.3
USP8-212ENST00000560730 NGRNQ9NPE2 291 aaKnown RBP13.2□□□□□ -0.3
USP8-212ENST00000560730 TOPORSQ9NS56 1045 aaPredicted RBP13.2□□□□□ -0.3
USP8-212ENST00000560730 CLDND1Q9NY35 253 aa13.2□□□□□ -0.3
USP8-212ENST00000560730 PCDHB13Q9Y5F0 798 aa13.2□□□□□ -0.3
USP8-212ENST00000560730 STYXL1Q9Y6J8 313 aa13.2□□□□□ -0.3
USP8-212ENST00000560730 UNC80Q8N2C7 3258 aa13.19□□□□□ -0.3
USP8-212ENST00000560730 H3BQ06 376 aaPredicted RBP13.19□□□□□ -0.3
USP8-212ENST00000560730 KLRC4O43908 158 aa13.19□□□□□ -0.3
USP8-212ENST00000560730 GLP2RO95838 553 aa13.19□□□□□ -0.3
USP8-212ENST00000560730 CLTAP09496 248 aa13.19□□□□□ -0.3
USP8-212ENST00000560730 CTSAP10619 480 aa13.19□□□□□ -0.3
USP8-212ENST00000560730 KCNE1P15382 129 aa13.19□□□□□ -0.3
USP8-212ENST00000560730 ABCD1P33897 745 aa13.19□□□□□ -0.3
USP8-212ENST00000560730 HOXD13P35453 343 aa13.19□□□□□ -0.3
USP8-212ENST00000560730 ANP32AP39687 249 aaKnown RBP13.19□□□□□ -0.3
USP8-212ENST00000560730 MRPS5P82675 430 aaKnown RBP13.19□□□□□ -0.3
USP8-212ENST00000560730 SPAG1Q07617 926 aa13.19□□□□□ -0.3
USP8-212ENST00000560730 EHHADHQ08426 723 aa13.19□□□□□ -0.3
USP8-212ENST00000560730 HSP90AA2PQ14568 343 aaPredicted RBP13.19□□□□□ -0.3
USP8-212ENST00000560730 SMC1AQ14683 1233 aaKnown RBP13.19□□□□□ -0.3
USP8-212ENST00000560730 ENOX2Q16206 610 aaKnown RBP13.19□□□□□ -0.3
USP8-212ENST00000560730 CD300LGQ6UXG3 332 aa13.19□□□□□ -0.3
USP8-212ENST00000560730 UNC13DQ70J99 1090 aa13.19□□□□□ -0.3
USP8-212ENST00000560730 RNF168Q8IYW5 571 aaPredicted RBP13.19□□□□□ -0.3
USP8-212ENST00000560730 ZSWIM2Q8NEG5 633 aa13.19□□□□□ -0.3
USP8-212ENST00000560730 HASPINQ8TF76 798 aa13.19□□□□□ -0.3
USP8-212ENST00000560730 ATXN2LQ8WWM7 1075 aaKnown RBP13.19□□□□□ -0.3
USP8-212ENST00000560730 C18orf25Q96B23 403 aaPredicted RBP13.19□□□□□ -0.3
USP8-212ENST00000560730 B3GALT6Q96L58 329 aa13.19□□□□□ -0.3
USP8-212ENST00000560730 ASB2Q96Q27 587 aa13.19□□□□□ -0.3
USP8-212ENST00000560730 PYM1Q9BRP8 204 aaKnown RBP13.19□□□□□ -0.3
USP8-212ENST00000560730 MSTO1Q9BUK6 570 aa13.19□□□□□ -0.3
USP8-212ENST00000560730 CNTN3Q9P232 1028 aa13.19□□□□□ -0.3
USP8-212ENST00000560730 ADAM28Q9UKQ2 775 aa13.19□□□□□ -0.3
USP8-212ENST00000560730 CIZ1Q9ULV3 898 aaPredicted RBP13.19□□□□□ -0.3
USP8-212ENST00000560730 TTC26A0AVF1 554 aa13.18□□□□□ -0.3
USP8-212ENST00000560730 LACTBL1A8MY62 500 aa13.18□□□□□ -0.3
USP8-212ENST00000560730 LILRB3O75022 631 aa13.18□□□□□ -0.3
USP8-212ENST00000560730 TBX10O75333 385 aa13.18□□□□□ -0.3
USP8-212ENST00000560730 NR1I2O75469 434 aa13.18□□□□□ -0.3
USP8-212ENST00000560730 KIF4AO95239 1232 aa13.18□□□□□ -0.3
USP8-212ENST00000560730 PRR29P0C7W0 189 aa13.18□□□□□ -0.3
USP8-212ENST00000560730 CA8P35219 290 aa13.18□□□□□ -0.3
Retrieved 100 of 20,778 RNA–protein pairs in 50.1 ms