RNA–Protein interactions for RNA: ENST00000556571.1

ACTN1-221, Transcript of actinin alpha 1, humanhuman

TSL 4

Gene ACTN1, Length 568 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ACTN1-221ENST00000556571 MTF2Q9Y483 593 aaPredicted RBP13.17□□□□□ -0.3
ACTN1-221ENST00000556571 FANCMQ8IYD8 2048 aa13.17□□□□□ -0.3
ACTN1-221ENST00000556571 CASTOR2A6NHX0 329 aa13.16□□□□□ -0.3
ACTN1-221ENST00000556571 NCAM2O15394 837 aa13.16□□□□□ -0.3
ACTN1-221ENST00000556571 CCL16O15467 120 aa13.16□□□□□ -0.3
ACTN1-221ENST00000556571 THP07101 528 aa13.16□□□□□ -0.3
ACTN1-221ENST00000556571 ZBTB41Q5SVQ8 909 aa13.16□□□□□ -0.3
ACTN1-221ENST00000556571 PPP4R3CPQ6ZMV5 832 aa13.16□□□□□ -0.3
ACTN1-221ENST00000556571 RTL10Q7L3V2 364 aa13.16□□□□□ -0.3
ACTN1-221ENST00000556571 ITFG1Q8TB96 612 aa13.16□□□□□ -0.3
ACTN1-221ENST00000556571 HASPINQ8TF76 798 aa13.16□□□□□ -0.3
ACTN1-221ENST00000556571 LARP6Q9BRS8 491 aaKnown RBP13.16□□□□□ -0.3
ACTN1-221ENST00000556571 LTB4R2Q9NPC1 389 aa13.16□□□□□ -0.3
ACTN1-221ENST00000556571 PRMT7Q9NVM4 692 aaPredicted RBP13.16□□□□□ -0.3
ACTN1-221ENST00000556571 ZSCAN32Q9NX65 697 aa13.16□□□□□ -0.3
ACTN1-221ENST00000556571 CACNG4Q9UBN1 327 aa13.16□□□□□ -0.3
ACTN1-221ENST00000556571 PCDHA12Q9UN75 941 aa13.16□□□□□ -0.3
ACTN1-221ENST00000556571 DOCK6Q96HP0 2047 aa13.15□□□□□ -0.3
ACTN1-221ENST00000556571 PRR5-ARHGAP8B1AHC4 643 aa13.15□□□□□ -0.3
ACTN1-221ENST00000556571 EPB41L2O43491 1005 aaKnown RBP13.15□□□□□ -0.3
ACTN1-221ENST00000556571 KIF4AO95239 1232 aa13.15□□□□□ -0.3
ACTN1-221ENST00000556571 XRCC6P12956 609 aaKnown RBP eCLIP13.15□□□□□ -0.3
ACTN1-221ENST00000556571 RARRES1P49788 294 aa13.15□□□□□ -0.3
ACTN1-221ENST00000556571 ARHGAP8P85298 464 aa13.15□□□□□ -0.3
ACTN1-221ENST00000556571 RAB33AQ14088 237 aa13.15□□□□□ -0.3
ACTN1-221ENST00000556571 PABPC1LQ4VXU2 614 aaKnown RBP13.15□□□□□ -0.3
ACTN1-221ENST00000556571 AXDND1Q5T1B0 1012 aaPredicted RBP13.15□□□□□ -0.3
ACTN1-221ENST00000556571 ERICH6BQ5W0A0 696 aa13.15□□□□□ -0.3
ACTN1-221ENST00000556571 ZBTB44Q8NCP5 570 aa13.15□□□□□ -0.3
ACTN1-221ENST00000556571 SLC7A14Q8TBB6 771 aa13.15□□□□□ -0.3
ACTN1-221ENST00000556571 OXER1Q8TDS5 423 aa13.15□□□□□ -0.3
ACTN1-221ENST00000556571 CLDN23Q96B33 292 aa13.15□□□□□ -0.3
ACTN1-221ENST00000556571 KXD1Q9BQD3 176 aa13.15□□□□□ -0.3
ACTN1-221ENST00000556571 TM6SF1Q9BZW5 370 aa13.15□□□□□ -0.3
ACTN1-221ENST00000556571 POLR3FQ9H1D9 316 aaPredicted RBP13.15□□□□□ -0.3
ACTN1-221ENST00000556571 TDRD15B5MCY1 1934 aaKnown RBP13.15□□□□□ -0.3
ACTN1-221ENST00000556571 F5P12259 2224 aa13.15□□□□□ -0.31
ACTN1-221ENST00000556571 LRRIQ4A6NIV6 560 aa13.14□□□□□ -0.31
ACTN1-221ENST00000556571 PTGESO14684 152 aa13.14□□□□□ -0.31
ACTN1-221ENST00000556571 N4BP3O15049 544 aa13.14□□□□□ -0.31
ACTN1-221ENST00000556571 ADAM12O43184 909 aa13.14□□□□□ -0.31
ACTN1-221ENST00000556571 ECI2O75521 394 aa13.14□□□□□ -0.31
ACTN1-221ENST00000556571 CD72P21854 359 aa13.14□□□□□ -0.31
ACTN1-221ENST00000556571 OR1D2P34982 312 aa13.14□□□□□ -0.31
ACTN1-221ENST00000556571 RPS9P46781 194 aaKnown RBP13.14□□□□□ -0.31
ACTN1-221ENST00000556571 FAM187BQ17R55 369 aa13.14□□□□□ -0.31
ACTN1-221ENST00000556571 EARS2Q5JPH6 523 aaKnown RBP13.14□□□□□ -0.31
ACTN1-221ENST00000556571 PDZRN4Q6ZMN7 1036 aaPredicted RBP13.14□□□□□ -0.31
ACTN1-221ENST00000556571 ZNF852Q6ZMS4 543 aa13.14□□□□□ -0.31
ACTN1-221ENST00000556571 ZBTB8OSQ8IWT0 167 aa13.14□□□□□ -0.31
ACTN1-221ENST00000556571 NPAS3Q8IXF0 933 aa13.14□□□□□ -0.31
ACTN1-221ENST00000556571 NELL1Q92832 810 aa13.14□□□□□ -0.31
ACTN1-221ENST00000556571 EPC1Q9H2F5 836 aa13.14□□□□□ -0.31
ACTN1-221ENST00000556571 FZD8Q9H461 694 aa13.14□□□□□ -0.31
ACTN1-221ENST00000556571 SNTG2Q9NY99 539 aa13.14□□□□□ -0.31
ACTN1-221ENST00000556571 GDE1Q9NZC3 331 aa13.14□□□□□ -0.31
ACTN1-221ENST00000556571 DNMT3BQ9UBC3 853 aaKnown RBP13.14□□□□□ -0.31
ACTN1-221ENST00000556571 DAXXQ9UER7 740 aaPredicted RBP13.14□□□□□ -0.31
ACTN1-221ENST00000556571 MRPS17Q9Y2R5 130 aaKnown RBP13.14□□□□□ -0.31
ACTN1-221ENST00000556571 MRPS23Q9Y3D9 190 aaKnown RBP13.14□□□□□ -0.31
ACTN1-221ENST00000556571 STK36Q9NRP7 1315 aa13.13□□□□□ -0.31
ACTN1-221ENST00000556571 TBC1D4O60343 1298 aa13.13□□□□□ -0.31
ACTN1-221ENST00000556571 USO1O60763 962 aaKnown RBP13.13□□□□□ -0.31
ACTN1-221ENST00000556571 LILRB5O75023 590 aa13.13□□□□□ -0.31
ACTN1-221ENST00000556571 FGFR3P22607 806 aa13.13□□□□□ -0.31
ACTN1-221ENST00000556571 ATXN1P54253 815 aaKnown RBP13.13□□□□□ -0.31
ACTN1-221ENST00000556571 LMNB2Q03252 620 aa13.13□□□□□ -0.31
ACTN1-221ENST00000556571 SCRN1Q12765 414 aa13.13□□□□□ -0.31
ACTN1-221ENST00000556571 NAB2Q15742 525 aa13.13□□□□□ -0.31
ACTN1-221ENST00000556571 CALCRLQ16602 461 aa13.13□□□□□ -0.31
ACTN1-221ENST00000556571 CDCA2Q69YH5 1023 aaPredicted RBP13.13□□□□□ -0.31
ACTN1-221ENST00000556571 TPRG1Q6ZUI0 275 aa13.13□□□□□ -0.31
ACTN1-221ENST00000556571 MCPH1Q8NEM0 835 aa13.13□□□□□ -0.31
ACTN1-221ENST00000556571 PIGOQ8TEQ8 1089 aa13.13□□□□□ -0.31
ACTN1-221ENST00000556571 WASF1Q92558 559 aa13.13□□□□□ -0.31
ACTN1-221ENST00000556571 FAM126AQ9BYI3 521 aaPredicted RBP13.13□□□□□ -0.31
ACTN1-221ENST00000556571 C2orf40Q9H1Z8 148 aa13.13□□□□□ -0.31
ACTN1-221ENST00000556571 PDZD7Q9H5P4 517 aa13.13□□□□□ -0.31
ACTN1-221ENST00000556571 TTC12Q9H892 705 aaPredicted RBP13.13□□□□□ -0.31
ACTN1-221ENST00000556571 GJB4Q9NTQ9 266 aa13.13□□□□□ -0.31
ACTN1-221ENST00000556571 PDRG1Q9NUG6 133 aa13.13□□□□□ -0.31
ACTN1-221ENST00000556571 HCFC1R1Q9NWW0 138 aa13.13□□□□□ -0.31
ACTN1-221ENST00000556571 PPP4R2Q9NY27 417 aa13.13□□□□□ -0.31
ACTN1-221ENST00000556571 SMG5Q9UPR3 1016 aaKnown RBP13.13□□□□□ -0.31
ACTN1-221ENST00000556571 RECQL4O94761 1208 aa13.12□□□□□ -0.31
ACTN1-221ENST00000556571 TARSP26639 723 aaKnown RBP13.12□□□□□ -0.31
ACTN1-221ENST00000556571 RBM25P49756 843 aaKnown RBP13.12□□□□□ -0.31
ACTN1-221ENST00000556571 ADCY1Q08828 1119 aa13.12□□□□□ -0.31
ACTN1-221ENST00000556571 PRPF4BQ13523 1007 aaKnown RBP13.12□□□□□ -0.31
ACTN1-221ENST00000556571 MAPK6Q16659 721 aa13.12□□□□□ -0.31
ACTN1-221ENST00000556571 TMEM132AQ24JP5 1023 aa13.12□□□□□ -0.31
ACTN1-221ENST00000556571 MAEAQ7L5Y9 396 aa13.12□□□□□ -0.31
ACTN1-221ENST00000556571 CNTNAP3BQ96NU0 1288 aa13.12□□□□□ -0.31
ACTN1-221ENST00000556571 ADPGKQ9BRR6 497 aa13.12□□□□□ -0.31
ACTN1-221ENST00000556571 CNTNAP3Q9BZ76 1288 aa13.12□□□□□ -0.31
ACTN1-221ENST00000556571 BRMS1Q9HCU9 246 aa13.12□□□□□ -0.31
ACTN1-221ENST00000556571 GPRC5CQ9NQ84 441 aa13.12□□□□□ -0.31
ACTN1-221ENST00000556571 AVENQ9NQS1 362 aaPredicted RBP13.12□□□□□ -0.31
ACTN1-221ENST00000556571 MTRRQ9UBK8 725 aa13.12□□□□□ -0.31
ACTN1-221ENST00000556571 BACE2Q9Y5Z0 518 aa13.12□□□□□ -0.31
Retrieved 100 of 20,778 RNA–protein pairs in 19.4 ms