RNA–Protein interactions for RNA: ENST00000543727.5

TSFM-208, Transcript of Ts translation elongation factor, mitochondrial, humanhuman

TSL 1 (best) BASIC

Gene TSFM, Length 651 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TSFM-208ENST00000543727 EPM2AIP1Q7L775 607 aaPredicted RBP19.51■□□□□ 0.71
TSFM-208ENST00000543727 DDX53Q86TM3 631 aaKnown RBP19.51■□□□□ 0.71
TSFM-208ENST00000543727 CEP120Q8N960 986 aa19.51■□□□□ 0.71
TSFM-208ENST00000543727 ZNF507Q8TCN5 953 aa19.51■□□□□ 0.71
TSFM-208ENST00000543727 PPP1R10Q96QC0 940 aaKnown RBP19.51■□□□□ 0.71
TSFM-208ENST00000543727 COLEC11Q9BWP8 271 aa19.51■□□□□ 0.71
TSFM-208ENST00000543727 NGRNQ9NPE2 291 aaKnown RBP19.51■□□□□ 0.71
TSFM-208ENST00000543727 MIOSQ9NXC5 875 aa19.51■□□□□ 0.71
TSFM-208ENST00000543727 CGNQ9P2M7 1197 aaKnown RBP19.51■□□□□ 0.71
TSFM-208ENST00000543727 KLRC4O43908 158 aa19.5■□□□□ 0.71
TSFM-208ENST00000543727 LDHAP00338 332 aaKnown RBP19.5■□□□□ 0.71
TSFM-208ENST00000543727 ADRB2P07550 413 aa19.5■□□□□ 0.71
TSFM-208ENST00000543727 HARSP12081 509 aaKnown RBP19.5■□□□□ 0.71
TSFM-208ENST00000543727 SNW1Q13573 536 aaKnown RBP19.5■□□□□ 0.71
TSFM-208ENST00000543727 GRAMD1CQ8IYS0 662 aa19.5■□□□□ 0.71
TSFM-208ENST00000543727 ENGASEQ8NFI3 743 aa19.5■□□□□ 0.71
TSFM-208ENST00000543727 POMGNT1Q8WZA1 660 aa19.5■□□□□ 0.71
TSFM-208ENST00000543727 HAPLN2Q9GZV7 340 aa19.5■□□□□ 0.71
TSFM-208ENST00000543727 TSHZ2Q9NRE2 1034 aa19.5■□□□□ 0.71
TSFM-208ENST00000543727 AGO2Q9UKV8 859 aaKnown RBP19.5■□□□□ 0.71
TSFM-208ENST00000543727 SMIM28A0A1B0GU29 152 aa19.49■□□□□ 0.71
TSFM-208ENST00000543727 NRP1O14786 923 aa19.49■□□□□ 0.71
TSFM-208ENST00000543727 FSCN2O14926 492 aa19.49■□□□□ 0.71
TSFM-208ENST00000543727 XPOTO43592 962 aaKnown RBP19.49■□□□□ 0.71
TSFM-208ENST00000543727 B4GALT3O60512 393 aa19.49■□□□□ 0.71
TSFM-208ENST00000543727 RHOBTB3O94955 611 aa19.49■□□□□ 0.71
TSFM-208ENST00000543727 KIF20AO95235 890 aa19.49■□□□□ 0.71
TSFM-208ENST00000543727 PBX3P40426 434 aa19.49■□□□□ 0.71
TSFM-208ENST00000543727 OSTNP61366 133 aa19.49■□□□□ 0.71
TSFM-208ENST00000543727 UBE2HP62256 183 aa19.49■□□□□ 0.71
TSFM-208ENST00000543727 PPP2R3AQ06190 1150 aa19.49■□□□□ 0.71
TSFM-208ENST00000543727 DPYDQ12882 1025 aa19.49■□□□□ 0.71
TSFM-208ENST00000543727 CAMK1Q14012 370 aa19.49■□□□□ 0.71
TSFM-208ENST00000543727 KCNB1Q14721 858 aa19.49■□□□□ 0.71
TSFM-208ENST00000543727 NAB2Q15742 525 aa19.49■□□□□ 0.71
TSFM-208ENST00000543727 DDX27Q96GQ7 796 aaKnown RBP19.49■□□□□ 0.71
TSFM-208ENST00000543727 FGFBP2Q9BYJ0 223 aa19.49■□□□□ 0.71
TSFM-208ENST00000543727 GTPBP4Q9BZE4 634 aaKnown RBP19.49■□□□□ 0.71
TSFM-208ENST00000543727 RPF1Q9H9Y2 349 aaKnown RBP19.49■□□□□ 0.71
TSFM-208ENST00000543727 CPSF3Q9UKF6 684 aaKnown RBP19.49■□□□□ 0.71
TSFM-208ENST00000543727 COL6A3P12111 3177 aa19.49■□□□□ 0.71
TSFM-208ENST00000543727 TTC26A0AVF1 554 aa19.48■□□□□ 0.71
TSFM-208ENST00000543727 ANKRD63C9JTQ0 380 aa19.48■□□□□ 0.71
TSFM-208ENST00000543727 TMEM189-UBE2V1I3L0A0 370 aa19.48■□□□□ 0.71
TSFM-208ENST00000543727 PRPF6O94906 941 aaKnown RBP19.48■□□□□ 0.71
TSFM-208ENST00000543727 RPN1P04843 607 aaKnown RBP19.48■□□□□ 0.71
TSFM-208ENST00000543727 DNAJB1P25685 340 aa19.48■□□□□ 0.71
TSFM-208ENST00000543727 CASP1P29466 404 aa19.48■□□□□ 0.71
TSFM-208ENST00000543727 OR1G1P47890 313 aa19.48■□□□□ 0.71
TSFM-208ENST00000543727 KCNA1Q09470 495 aa19.48■□□□□ 0.71
TSFM-208ENST00000543727 SLC10A6Q3KNW5 377 aa19.48■□□□□ 0.71
TSFM-208ENST00000543727 KMT5BQ4FZB7 885 aa19.48■□□□□ 0.71
TSFM-208ENST00000543727 GPR65Q8IYL9 337 aa19.48■□□□□ 0.71
TSFM-208ENST00000543727 GOLGA5Q8TBA6 731 aa19.48■□□□□ 0.71
TSFM-208ENST00000543727 CDCA3Q99618 268 aaPredicted RBP19.48■□□□□ 0.71
TSFM-208ENST00000543727 ENTPD7Q9NQZ7 604 aa19.48■□□□□ 0.71
TSFM-208ENST00000543727 RMND1Q9NWS8 449 aa19.48■□□□□ 0.71
TSFM-208ENST00000543727 SSX2IPQ9Y2D8 614 aa19.48■□□□□ 0.71
TSFM-208ENST00000543727 DERAQ9Y315 318 aa19.48■□□□□ 0.71
TSFM-208ENST00000543727 IRAK3Q9Y616 596 aa19.48■□□□□ 0.71
TSFM-208ENST00000543727 KINO60870 393 aaKnown RBP19.47■□□□□ 0.71
TSFM-208ENST00000543727 CXCL8P10145 99 aa19.47■□□□□ 0.71
TSFM-208ENST00000543727 ADSSP30520 456 aa19.47■□□□□ 0.71
TSFM-208ENST00000543727 ELAVL2Q12926 359 aaKnown RBP19.47■□□□□ 0.71
TSFM-208ENST00000543727 SMC1AQ14683 1233 aaKnown RBP19.47■□□□□ 0.71
TSFM-208ENST00000543727 HS2ST1Q7LGA3 356 aa19.47■□□□□ 0.71
TSFM-208ENST00000543727 MICALL1Q8N3F8 863 aa19.47■□□□□ 0.71
TSFM-208ENST00000543727 SCFD1Q8WVM8 642 aa19.47■□□□□ 0.71
TSFM-208ENST00000543727 TCF25Q9BQ70 676 aa19.47■□□□□ 0.71
TSFM-208ENST00000543727 ASB7Q9H672 318 aa19.47■□□□□ 0.71
TSFM-208ENST00000543727 KIAA1586Q9HCI6 787 aa19.47■□□□□ 0.71
TSFM-208ENST00000543727 MARCH5Q9NX47 278 aa19.47■□□□□ 0.71
TSFM-208ENST00000543727 ADAM28Q9UKQ2 775 aa19.47■□□□□ 0.71
TSFM-208ENST00000543727 COG5Q9UP83 839 aa19.47■□□□□ 0.71
TSFM-208ENST00000543727 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP19.46■□□□□ 0.71
TSFM-208ENST00000543727 NT5C1B-RDH14C9J2C7 533 aa19.46■□□□□ 0.71
TSFM-208ENST00000543727 IL18RAPO95256 599 aa19.46■□□□□ 0.71
TSFM-208ENST00000543727 SMC2O95347 1197 aa19.46■□□□□ 0.71
TSFM-208ENST00000543727 EFEMP2O95967 443 aa19.46■□□□□ 0.71
TSFM-208ENST00000543727 CTSAP10619 480 aa19.46■□□□□ 0.71
TSFM-208ENST00000543727 CYP3A5P20815 502 aa19.46■□□□□ 0.71
TSFM-208ENST00000543727 RPL9P32969 192 aaKnown RBP19.46■□□□□ 0.71
TSFM-208ENST00000543727 COL19A1Q14993 1142 aa19.46■□□□□ 0.71
TSFM-208ENST00000543727 ENOX2Q16206 610 aaKnown RBP19.46■□□□□ 0.71
TSFM-208ENST00000543727 KNOP1Q1ED39 458 aaKnown RBP19.46■□□□□ 0.71
TSFM-208ENST00000543727 TPRNQ4KMQ1 711 aa19.46■□□□□ 0.71
TSFM-208ENST00000543727 ARMCX5Q6P1M9 558 aa19.46■□□□□ 0.71
TSFM-208ENST00000543727 TMEM173Q86WV6 379 aaPredicted RBP19.46■□□□□ 0.71
TSFM-208ENST00000543727 NT5DC4Q86YG4 428 aa19.46■□□□□ 0.71
TSFM-208ENST00000543727 RNF168Q8IYW5 571 aaPredicted RBP19.46■□□□□ 0.71
TSFM-208ENST00000543727 VPS52Q8N1B4 723 aa19.46■□□□□ 0.71
TSFM-208ENST00000543727 TMEM174Q8WUU8 243 aa19.46■□□□□ 0.71
TSFM-208ENST00000543727 HPS3Q969F9 1004 aa19.46■□□□□ 0.71
TSFM-208ENST00000543727 GSDMAQ96QA5 445 aa19.46■□□□□ 0.71
TSFM-208ENST00000543727 ZBP1Q9H171 429 aa19.46■□□□□ 0.71
TSFM-208ENST00000543727 SLC39A2Q9NP94 309 aa19.46■□□□□ 0.71
TSFM-208ENST00000543727 PRG3Q9Y2Y8 225 aaPredicted RBP19.46■□□□□ 0.71
TSFM-208ENST00000543727 SF3B1O75533 1304 aaKnown RBP eCLIP19.46■□□□□ 0.71
TSFM-208ENST00000543727 EYSQ5T1H1 3165 aa19.46■□□□□ 0.71
TSFM-208ENST00000543727 EXTL3O43909 919 aa19.45■□□□□ 0.7
Retrieved 100 of 20,778 RNA–protein pairs in 50.6 ms