RNA–Protein interactions for RNA: ENST00000542354.1

TRAV1-1-201, Transcript of T cell receptor alpha variable 1-1, humanhuman

APPRIS P1 BASIC

Gene TRAV1-1, Length 392 nt, Biotype TR V gene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAV1-1-201ENST00000542354 DCP1AQ9NPI6 582 aaPredicted RBP2.71□□□□□ -1.98
TRAV1-1-201ENST00000542354 GINM1Q9NU53 330 aa2.71□□□□□ -1.98
TRAV1-1-201ENST00000542354 MIS18AQ9NYP9 233 aa2.71□□□□□ -1.98
TRAV1-1-201ENST00000542354 GPN3Q9UHW5 284 aaPredicted RBP2.71□□□□□ -1.98
TRAV1-1-201ENST00000542354 CTNND2Q9UQB3 1225 aa2.71□□□□□ -1.98
TRAV1-1-201ENST00000542354 APOBEC2Q9Y235 224 aaKnown RBP2.71□□□□□ -1.98
TRAV1-1-201ENST00000542354 Q9Y3F1 56 aa2.71□□□□□ -1.98
TRAV1-1-201ENST00000542354 ATG2AQ2TAZ0 1938 aa2.71□□□□□ -1.98
TRAV1-1-201ENST00000542354 MED13Q9UHV7 2174 aa2.71□□□□□ -1.98
TRAV1-1-201ENST00000542354 TRIP12Q14669 1992 aaPredicted RBP2.7□□□□□ -1.98
TRAV1-1-201ENST00000542354 KNTC1P50748 2209 aa2.7□□□□□ -1.98
TRAV1-1-201ENST00000542354 ADGRA3Q8IWK6 1321 aa2.7□□□□□ -1.98
TRAV1-1-201ENST00000542354 PLXNB3Q9ULL4 1909 aa2.7□□□□□ -1.98
TRAV1-1-201ENST00000542354 TRBV21OR9-2A0A075B6F4 123 aaPredicted RBP2.7□□□□□ -1.98
TRAV1-1-201ENST00000542354 E9PSI1 815 aa2.7□□□□□ -1.98
TRAV1-1-201ENST00000542354 ANXA1P04083 346 aa2.7□□□□□ -1.98
TRAV1-1-201ENST00000542354 PCCAP05165 728 aaPredicted RBP2.7□□□□□ -1.98
TRAV1-1-201ENST00000542354 CD72P21854 359 aa2.7□□□□□ -1.98
TRAV1-1-201ENST00000542354 GLDCP23378 1020 aa2.7□□□□□ -1.98
TRAV1-1-201ENST00000542354 GBP2P32456 591 aaPredicted RBP2.7□□□□□ -1.98
TRAV1-1-201ENST00000542354 GRIA4P48058 902 aa2.7□□□□□ -1.98
TRAV1-1-201ENST00000542354 ALDH7A1P49419 539 aaKnown RBP2.7□□□□□ -1.98
TRAV1-1-201ENST00000542354 UCNP55089 124 aa2.7□□□□□ -1.98
TRAV1-1-201ENST00000542354 ERVFC1P60507 584 aa2.7□□□□□ -1.98
TRAV1-1-201ENST00000542354 EIF4A1P60842 406 aaKnown RBP2.7□□□□□ -1.98
TRAV1-1-201ENST00000542354 GPC5P78333 572 aa2.7□□□□□ -1.98
TRAV1-1-201ENST00000542354 PFKPQ01813 784 aa2.7□□□□□ -1.98
TRAV1-1-201ENST00000542354 CREB5Q02930 508 aa2.7□□□□□ -1.98
TRAV1-1-201ENST00000542354 RBL2Q08999 1139 aa2.7□□□□□ -1.98
TRAV1-1-201ENST00000542354 LMAN2Q12907 356 aa2.7□□□□□ -1.98
TRAV1-1-201ENST00000542354 SEMA3BQ13214 749 aa2.7□□□□□ -1.98
TRAV1-1-201ENST00000542354 LRRC14Q15048 493 aa2.7□□□□□ -1.98
TRAV1-1-201ENST00000542354 TRIP6Q15654 476 aaKnown RBP2.7□□□□□ -1.98
TRAV1-1-201ENST00000542354 ZNF852Q6ZMS4 543 aa2.7□□□□□ -1.98
TRAV1-1-201ENST00000542354 CAPN12Q6ZSI9 719 aa2.7□□□□□ -1.98
TRAV1-1-201ENST00000542354 CXXC5Q7LFL8 322 aaKnown RBP2.7□□□□□ -1.98
TRAV1-1-201ENST00000542354 TMPRSS7Q7RTY8 843 aa2.7□□□□□ -1.98
TRAV1-1-201ENST00000542354 THAP5Q7Z6K1 395 aa2.7□□□□□ -1.98
TRAV1-1-201ENST00000542354 KBTBD6Q86V97 674 aa2.7□□□□□ -1.98
TRAV1-1-201ENST00000542354 VPS37DQ86XT2 251 aa2.7□□□□□ -1.98
TRAV1-1-201ENST00000542354 SHISA5Q8N114 240 aa2.7□□□□□ -1.98
TRAV1-1-201ENST00000542354 HDDC3Q8N4P3 179 aa2.7□□□□□ -1.98
TRAV1-1-201ENST00000542354 PNPLA1Q8N8W4 532 aa2.7□□□□□ -1.98
TRAV1-1-201ENST00000542354 CHST13Q8NET6 341 aa2.7□□□□□ -1.98
TRAV1-1-201ENST00000542354 SEPT8Q92599 483 aa2.7□□□□□ -1.98
TRAV1-1-201ENST00000542354 DDX11Q96FC9 970 aa2.7□□□□□ -1.98
TRAV1-1-201ENST00000542354 ZC3H10Q96K80 434 aaKnown RBP2.7□□□□□ -1.98
TRAV1-1-201ENST00000542354 C12orf42Q96LP6 360 aa2.7□□□□□ -1.98
TRAV1-1-201ENST00000542354 TCF12Q99081 682 aa2.7□□□□□ -1.98
TRAV1-1-201ENST00000542354 CARD11Q9BXL7 1154 aa2.7□□□□□ -1.98
TRAV1-1-201ENST00000542354 GPRC5CQ9NQ84 441 aa2.7□□□□□ -1.98
TRAV1-1-201ENST00000542354 CHPF2Q9P2E5 772 aa2.7□□□□□ -1.98
TRAV1-1-201ENST00000542354 EGFL7Q9UHF1 273 aa2.7□□□□□ -1.98
TRAV1-1-201ENST00000542354 PUF60Q9UHX1 559 aaKnown RBP2.7□□□□□ -1.98
TRAV1-1-201ENST00000542354 ADAMTS6Q9UKP5 1117 aa2.7□□□□□ -1.98
TRAV1-1-201ENST00000542354 PPP1R9AQ9ULJ8 1098 aa2.7□□□□□ -1.98
TRAV1-1-201ENST00000542354 GNEQ9Y223 722 aaKnown RBP2.7□□□□□ -1.98
TRAV1-1-201ENST00000542354 ZNFX1Q9P2E3 1918 aaKnown RBP2.7□□□□□ -1.98
TRAV1-1-201ENST00000542354 ASTN1O14525 1302 aa2.69□□□□□ -1.98
TRAV1-1-201ENST00000542354 SPAG17Q6Q759 2223 aa2.69□□□□□ -1.98
TRAV1-1-201ENST00000542354 BCLAF3A2AJT9 711 aaKnown RBP2.69□□□□□ -1.98
TRAV1-1-201ENST00000542354 ZNF503-AS2A6NEH8 195 aa2.69□□□□□ -1.98
TRAV1-1-201ENST00000542354 A6NHS1 94 aa2.69□□□□□ -1.98
TRAV1-1-201ENST00000542354 METTL12A8MUP2 240 aa2.69□□□□□ -1.98
TRAV1-1-201ENST00000542354 FANCGO15287 622 aa2.69□□□□□ -1.98
TRAV1-1-201ENST00000542354 NUAK1O60285 661 aa2.69□□□□□ -1.98
TRAV1-1-201ENST00000542354 KPNA6O60684 536 aa2.69□□□□□ -1.98
TRAV1-1-201ENST00000542354 RPP40O75818 363 aaKnown RBP2.69□□□□□ -1.98
TRAV1-1-201ENST00000542354 RHOBTB1O94844 696 aa2.69□□□□□ -1.98
TRAV1-1-201ENST00000542354 SIX3O95343 332 aaPredicted RBP2.69□□□□□ -1.98
TRAV1-1-201ENST00000542354 MYL3P08590 195 aa2.69□□□□□ -1.98
TRAV1-1-201ENST00000542354 FTH1P19P0C7X4 201 aa2.69□□□□□ -1.98
TRAV1-1-201ENST00000542354 CCDC192P0DO97 292 aa2.69□□□□□ -1.98
TRAV1-1-201ENST00000542354 MED14OSP0DP75 135 aa2.69□□□□□ -1.98
TRAV1-1-201ENST00000542354 HLA-EP13747 358 aa2.69□□□□□ -1.98
TRAV1-1-201ENST00000542354 LIG1P18858 919 aa2.69□□□□□ -1.98
TRAV1-1-201ENST00000542354 HOXA6P31267 233 aa2.69□□□□□ -1.98
TRAV1-1-201ENST00000542354 COPB2P35606 906 aa2.69□□□□□ -1.98
TRAV1-1-201ENST00000542354 GYG1P46976 350 aa2.69□□□□□ -1.98
TRAV1-1-201ENST00000542354 TMPRSS3P57727 454 aa2.69□□□□□ -1.98
TRAV1-1-201ENST00000542354 FAM193AP78312 1265 aa2.69□□□□□ -1.98
TRAV1-1-201ENST00000542354 PURAQ00577 322 aaKnown RBP2.69□□□□□ -1.98
TRAV1-1-201ENST00000542354 TLE3Q04726 772 aa2.69□□□□□ -1.98
TRAV1-1-201ENST00000542354 ELF2Q15723 593 aa2.69□□□□□ -1.98
TRAV1-1-201ENST00000542354 SPRED3Q2MJR0 410 aa2.69□□□□□ -1.98
TRAV1-1-201ENST00000542354 LETM2Q2VYF4 491 aa2.69□□□□□ -1.98
TRAV1-1-201ENST00000542354 PLEKHG4Q58EX7 1191 aa2.69□□□□□ -1.98
TRAV1-1-201ENST00000542354 BRDTQ58F21 947 aaPredicted RBP2.69□□□□□ -1.98
TRAV1-1-201ENST00000542354 ARHGAP40Q5TG30 622 aa2.69□□□□□ -1.98
TRAV1-1-201ENST00000542354 BROXQ5VW32 411 aa2.69□□□□□ -1.98
TRAV1-1-201ENST00000542354 C1QL3Q5VWW1 255 aa2.69□□□□□ -1.98
TRAV1-1-201ENST00000542354 IQSEC1Q6DN90 963 aa2.69□□□□□ -1.98
TRAV1-1-201ENST00000542354 TOGARAM2Q6ZUX3 1019 aa2.69□□□□□ -1.98
TRAV1-1-201ENST00000542354 C22orf34Q6ZV56 151 aa2.69□□□□□ -1.98
TRAV1-1-201ENST00000542354 MCM10Q7L590 875 aa2.69□□□□□ -1.98
TRAV1-1-201ENST00000542354 GPR149Q86SP6 731 aa2.69□□□□□ -1.98
TRAV1-1-201ENST00000542354 WDR5BQ86VZ2 330 aa2.69□□□□□ -1.98
TRAV1-1-201ENST00000542354 TMC8Q8IU68 726 aa2.69□□□□□ -1.98
TRAV1-1-201ENST00000542354 WFDC3Q8IUB2 231 aa2.69□□□□□ -1.98
TRAV1-1-201ENST00000542354 GALNT15Q8N3T1 639 aa2.69□□□□□ -1.98
Retrieved 100 of 20,778 RNA–protein pairs in 24.7 ms