RNA–Protein interactions for RNA: ENST00000539890.1

CYB561A3-213, Transcript of cytochrome b561 family member A3, humanhuman

TSL 4 BASIC

Gene CYB561A3, Length 572 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CYB561A3-213ENST00000539890 ANKRD63C9JTQ0 380 aa13.65□□□□□ -0.22
CYB561A3-213ENST00000539890 EIF3DO15371 548 aaKnown RBP eCLIP13.65□□□□□ -0.22
CYB561A3-213ENST00000539890 SMC2O95347 1197 aa13.65□□□□□ -0.22
CYB561A3-213ENST00000539890 RPN1P04843 607 aaKnown RBP13.65□□□□□ -0.22
CYB561A3-213ENST00000539890 SRGAP2BP0DMP2 458 aa13.65□□□□□ -0.22
CYB561A3-213ENST00000539890 AAK1Q2M2I8 961 aa13.65□□□□□ -0.22
CYB561A3-213ENST00000539890 TCEAL5Q5H9L2 206 aa13.65□□□□□ -0.22
CYB561A3-213ENST00000539890 PLPP4Q5VZY2 271 aa13.65□□□□□ -0.22
CYB561A3-213ENST00000539890 ARMCX5Q6P1M9 558 aa13.65□□□□□ -0.22
CYB561A3-213ENST00000539890 RBM23Q86U06 439 aaKnown RBP13.65□□□□□ -0.22
CYB561A3-213ENST00000539890 CD302Q8IX05 232 aa13.65□□□□□ -0.22
CYB561A3-213ENST00000539890 HLA-CQ95604 372 aa13.65□□□□□ -0.22
CYB561A3-213ENST00000539890 HPS3Q969F9 1004 aa13.65□□□□□ -0.22
CYB561A3-213ENST00000539890 DDX27Q96GQ7 796 aaKnown RBP13.65□□□□□ -0.22
CYB561A3-213ENST00000539890 UROC1Q96N76 676 aa13.65□□□□□ -0.22
CYB561A3-213ENST00000539890 GTF3C5Q9Y5Q8 519 aaPredicted RBP13.65□□□□□ -0.22
CYB561A3-213ENST00000539890 SZT2Q5T011 3432 aa13.65□□□□□ -0.22
CYB561A3-213ENST00000539890 MYH11P35749 1972 aa13.64□□□□□ -0.23
CYB561A3-213ENST00000539890 FSD2A1L4K1 749 aa13.64□□□□□ -0.23
CYB561A3-213ENST00000539890 TRAPPC3O43617 180 aa13.64□□□□□ -0.23
CYB561A3-213ENST00000539890 URODP06132 367 aa13.64□□□□□ -0.23
CYB561A3-213ENST00000539890 CXCL8P10145 99 aa13.64□□□□□ -0.23
CYB561A3-213ENST00000539890 DNAJB1P25685 340 aa13.64□□□□□ -0.23
CYB561A3-213ENST00000539890 ACOT2P49753 483 aa13.64□□□□□ -0.23
CYB561A3-213ENST00000539890 CASP5P51878 434 aa13.64□□□□□ -0.23
CYB561A3-213ENST00000539890 ERVFC1P60507 584 aa13.64□□□□□ -0.23
CYB561A3-213ENST00000539890 DSC1Q08554 894 aa13.64□□□□□ -0.23
CYB561A3-213ENST00000539890 KCNA1Q09470 495 aa13.64□□□□□ -0.23
CYB561A3-213ENST00000539890 KMT5BQ4FZB7 885 aa13.64□□□□□ -0.23
CYB561A3-213ENST00000539890 NELFCDQ8IXH7 590 aa13.64□□□□□ -0.23
CYB561A3-213ENST00000539890 GSTCDQ8NEC7 633 aa13.64□□□□□ -0.23
CYB561A3-213ENST00000539890 RABGGTAQ92696 567 aa13.64□□□□□ -0.23
CYB561A3-213ENST00000539890 KIF12Q96FN5 646 aa13.64□□□□□ -0.23
CYB561A3-213ENST00000539890 SNX27Q96L92 541 aa13.64□□□□□ -0.23
CYB561A3-213ENST00000539890 FAM213AQ9BRX8 229 aa13.64□□□□□ -0.23
CYB561A3-213ENST00000539890 MRPL17Q9NRX2 175 aaKnown RBP13.64□□□□□ -0.23
CYB561A3-213ENST00000539890 RMND1Q9NWS8 449 aa13.64□□□□□ -0.23
CYB561A3-213ENST00000539890 COG5Q9UP83 839 aa13.64□□□□□ -0.23
CYB561A3-213ENST00000539890 R3HCC1Q9Y3T6 440 aaKnown RBP13.64□□□□□ -0.23
CYB561A3-213ENST00000539890 NUB1Q9Y5A7 615 aa13.64□□□□□ -0.23
CYB561A3-213ENST00000539890 UBE4BO95155 1302 aa13.64□□□□□ -0.23
CYB561A3-213ENST00000539890 ZC3H11BA0A1B0GUI2 810 aaPredicted RBP13.63□□□□□ -0.23
CYB561A3-213ENST00000539890 SPDYE4A6NLX3 237 aa13.63□□□□□ -0.23
CYB561A3-213ENST00000539890 GOLGA6L22H0YM25 854 aa13.63□□□□□ -0.23
CYB561A3-213ENST00000539890 ABLIM1O14639 778 aa13.63□□□□□ -0.23
CYB561A3-213ENST00000539890 PTGESO14684 152 aa13.63□□□□□ -0.23
CYB561A3-213ENST00000539890 KIAA0391O15091 583 aaKnown RBP13.63□□□□□ -0.23
CYB561A3-213ENST00000539890 PRPF40AO75400 957 aaKnown RBP13.63□□□□□ -0.23
CYB561A3-213ENST00000539890 PPP1R37O75864 691 aa13.63□□□□□ -0.23
CYB561A3-213ENST00000539890 B3GAT3O94766 335 aa13.63□□□□□ -0.23
CYB561A3-213ENST00000539890 KCNE1P15382 129 aa13.63□□□□□ -0.23
CYB561A3-213ENST00000539890 GARTP22102 1010 aa13.63□□□□□ -0.23
CYB561A3-213ENST00000539890 IRS1P35568 1242 aa13.63□□□□□ -0.23
CYB561A3-213ENST00000539890 NRIP1P48552 1158 aa13.63□□□□□ -0.23
CYB561A3-213ENST00000539890 SNRPFP62306 86 aaKnown RBP13.63□□□□□ -0.23
CYB561A3-213ENST00000539890 ELAVL2Q12926 359 aaKnown RBP13.63□□□□□ -0.23
CYB561A3-213ENST00000539890 SLC10A6Q3KNW5 377 aa13.63□□□□□ -0.23
CYB561A3-213ENST00000539890 DCLRE1AQ6PJP8 1040 aa13.63□□□□□ -0.23
CYB561A3-213ENST00000539890 BEST2Q8NFU1 509 aa13.63□□□□□ -0.23
CYB561A3-213ENST00000539890 GOLGA5Q8TBA6 731 aa13.63□□□□□ -0.23
CYB561A3-213ENST00000539890 ZNF507Q8TCN5 953 aa13.63□□□□□ -0.23
CYB561A3-213ENST00000539890 TIGD1Q96MW7 591 aa13.63□□□□□ -0.23
CYB561A3-213ENST00000539890 GBP4Q96PP9 640 aa13.63□□□□□ -0.23
CYB561A3-213ENST00000539890 TSPAN18Q96SJ8 248 aa13.63□□□□□ -0.23
CYB561A3-213ENST00000539890 STRA6Q9BX79 667 aa13.63□□□□□ -0.23
CYB561A3-213ENST00000539890 EMILIN2Q9BXX0 1053 aa13.63□□□□□ -0.23
CYB561A3-213ENST00000539890 PCIF1Q9H4Z3 704 aa13.63□□□□□ -0.23
CYB561A3-213ENST00000539890 KIAA1586Q9HCI6 787 aa13.63□□□□□ -0.23
CYB561A3-213ENST00000539890 CLDND1Q9NY35 253 aa13.63□□□□□ -0.23
CYB561A3-213ENST00000539890 CNTN3Q9P232 1028 aa13.63□□□□□ -0.23
CYB561A3-213ENST00000539890 THEGQ9P2T0 379 aa13.63□□□□□ -0.23
CYB561A3-213ENST00000539890 ADAM28Q9UKQ2 775 aa13.63□□□□□ -0.23
CYB561A3-213ENST00000539890 FNDC1Q4ZHG4 1894 aaPredicted RBP13.63□□□□□ -0.23
CYB561A3-213ENST00000539890 SF3B1O75533 1304 aaKnown RBP eCLIP13.63□□□□□ -0.23
CYB561A3-213ENST00000539890 MYO9BQ13459 2157 aa13.62□□□□□ -0.23
CYB561A3-213ENST00000539890 LACTBL1A8MY62 500 aa13.62□□□□□ -0.23
CYB561A3-213ENST00000539890 TISP43B9A030 160 aa13.62□□□□□ -0.23
CYB561A3-213ENST00000539890 C2CD2LO14523 706 aa13.62□□□□□ -0.23
CYB561A3-213ENST00000539890 PER2O15055 1255 aa13.62□□□□□ -0.23
CYB561A3-213ENST00000539890 EXTL3O43909 919 aa13.62□□□□□ -0.23
CYB561A3-213ENST00000539890 RPL9P32969 192 aaKnown RBP13.62□□□□□ -0.23
CYB561A3-213ENST00000539890 TNFSF9P41273 254 aa13.62□□□□□ -0.23
CYB561A3-213ENST00000539890 UBE2HP62256 183 aa13.62□□□□□ -0.23
CYB561A3-213ENST00000539890 SPAG1Q07617 926 aa13.62□□□□□ -0.23
CYB561A3-213ENST00000539890 KNOP1Q1ED39 458 aaKnown RBP13.62□□□□□ -0.23
CYB561A3-213ENST00000539890 USP41Q3LFD5 358 aa13.62□□□□□ -0.23
CYB561A3-213ENST00000539890 SLC39A4Q6P5W5 647 aa13.62□□□□□ -0.23
CYB561A3-213ENST00000539890 ALKAL1Q6UXT8 129 aa13.62□□□□□ -0.23
CYB561A3-213ENST00000539890 TMEM173Q86WV6 379 aaPredicted RBP13.62□□□□□ -0.23
CYB561A3-213ENST00000539890 CEP57Q86XR8 500 aa13.62□□□□□ -0.23
CYB561A3-213ENST00000539890 FMR1NBQ8N0W7 255 aaPredicted RBP13.62□□□□□ -0.23
CYB561A3-213ENST00000539890 MRPL43Q8N983 215 aaKnown RBP13.62□□□□□ -0.23
CYB561A3-213ENST00000539890 HASPINQ8TF76 798 aa13.62□□□□□ -0.23
CYB561A3-213ENST00000539890 SMARCE1Q969G3 411 aa13.62□□□□□ -0.23
CYB561A3-213ENST00000539890 SAAL1Q96ER3 474 aa13.62□□□□□ -0.23
CYB561A3-213ENST00000539890 PPP1R10Q96QC0 940 aaKnown RBP13.62□□□□□ -0.23
CYB561A3-213ENST00000539890 CDCA3Q99618 268 aaPredicted RBP13.62□□□□□ -0.23
CYB561A3-213ENST00000539890 FGFBP2Q9BYJ0 223 aa13.62□□□□□ -0.23
CYB561A3-213ENST00000539890 HAPLN2Q9GZV7 340 aa13.62□□□□□ -0.23
CYB561A3-213ENST00000539890 ASB7Q9H672 318 aa13.62□□□□□ -0.23
Retrieved 100 of 20,778 RNA–protein pairs in 48.7 ms