RNA–Protein interactions for RNA: ENST00000535977.5

RAB40C-203, Transcript of RAB40C, member RAS oncogene family, humanhuman

APPRIS P1 TSL 5 BASIC

Gene RAB40C, Length 2,717 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAB40C-203ENST00000535977 FRMD4AQ9P2Q2 1039 aaPredicted RBP19.21■□□□□ 0.67
RAB40C-203ENST00000535977 ZBED4O75132 1171 aa19.21■□□□□ 0.67
RAB40C-203ENST00000535977 GZMAP12544 262 aa19.21■□□□□ 0.67
RAB40C-203ENST00000535977 NQO1P15559 274 aaKnown RBP19.21■□□□□ 0.67
RAB40C-203ENST00000535977 ABCB4P21439 1286 aa19.21■□□□□ 0.67
RAB40C-203ENST00000535977 ANKRD20A2Q5SQ80 823 aa19.21■□□□□ 0.67
RAB40C-203ENST00000535977 ANKRD20A1Q5TYW2 823 aa19.21■□□□□ 0.67
RAB40C-203ENST00000535977 ANKRD20A3Q5VUR7 823 aa19.21■□□□□ 0.67
RAB40C-203ENST00000535977 CDAN1Q8IWY9 1227 aa19.21■□□□□ 0.67
RAB40C-203ENST00000535977 RPUSD2Q8IZ73 545 aaKnown RBP19.21■□□□□ 0.67
RAB40C-203ENST00000535977 IL31RAQ8NI17 732 aa19.21■□□□□ 0.67
RAB40C-203ENST00000535977 PCIF1Q9H4Z3 704 aa19.21■□□□□ 0.67
RAB40C-203ENST00000535977 CTNND1O60716 968 aaKnown RBP19.2■□□□□ 0.66
RAB40C-203ENST00000535977 GPC5P78333 572 aa19.2■□□□□ 0.66
RAB40C-203ENST00000535977 ROR2Q01974 943 aaKnown RBP19.2■□□□□ 0.66
RAB40C-203ENST00000535977 ENPEPQ07075 957 aa19.2■□□□□ 0.66
RAB40C-203ENST00000535977 ERMARDQ5T6L9 678 aa19.2■□□□□ 0.66
RAB40C-203ENST00000535977 USP37Q86T82 979 aa19.2■□□□□ 0.66
RAB40C-203ENST00000535977 DDX47Q9H0S4 455 aaKnown RBP19.2■□□□□ 0.66
RAB40C-203ENST00000535977 THAP2Q9H0W7 228 aa19.2■□□□□ 0.66
RAB40C-203ENST00000535977 C17orf75Q9HAS0 396 aa19.2■□□□□ 0.66
RAB40C-203ENST00000535977 PKD2L1Q9P0L9 805 aa19.2■□□□□ 0.66
RAB40C-203ENST00000535977 PPP1R9AQ9ULJ8 1098 aa19.2■□□□□ 0.66
RAB40C-203ENST00000535977 FAM187AA6NFU0 413 aa19.2■□□□□ 0.66
RAB40C-203ENST00000535977 A8MUI8 341 aa19.2■□□□□ 0.66
RAB40C-203ENST00000535977 MAFGO15525 162 aa19.2■□□□□ 0.66
RAB40C-203ENST00000535977 DKC1O60832 514 aaKnown RBP eCLIP19.2■□□□□ 0.66
RAB40C-203ENST00000535977 SMIM24O75264 130 aa19.2■□□□□ 0.66
RAB40C-203ENST00000535977 LUC7L3O95232 432 aaKnown RBP19.2■□□□□ 0.66
RAB40C-203ENST00000535977 FGGP02679 453 aa19.2■□□□□ 0.66
RAB40C-203ENST00000535977 PPP3CAQ08209 521 aa19.2■□□□□ 0.66
RAB40C-203ENST00000535977 LAMB3Q13751 1172 aa19.2■□□□□ 0.66
RAB40C-203ENST00000535977 PGM5Q15124 567 aa19.2■□□□□ 0.66
RAB40C-203ENST00000535977 MAEAQ7L5Y9 396 aa19.2■□□□□ 0.66
RAB40C-203ENST00000535977 UBL4BQ8N7F7 174 aa19.2■□□□□ 0.66
RAB40C-203ENST00000535977 ZNF526Q8TF50 670 aaPredicted RBP19.2■□□□□ 0.66
RAB40C-203ENST00000535977 UBLCP1Q8WVY7 318 aaPredicted RBP19.2■□□□□ 0.66
RAB40C-203ENST00000535977 RPS6KC1Q96S38 1066 aa19.2■□□□□ 0.66
RAB40C-203ENST00000535977 FAM129AQ9BZQ8 928 aa19.2■□□□□ 0.66
RAB40C-203ENST00000535977 DPPA5A6NC42 116 aa19.19■□□□□ 0.66
RAB40C-203ENST00000535977 MXI1P50539 228 aa19.19■□□□□ 0.66
RAB40C-203ENST00000535977 MFAP3P55082 362 aa19.19■□□□□ 0.66
RAB40C-203ENST00000535977 PTENP60484 403 aa19.19■□□□□ 0.66
RAB40C-203ENST00000535977 CPXCR1Q8N123 301 aa19.19■□□□□ 0.66
RAB40C-203ENST00000535977 CBWD1Q9BRT8 395 aa19.19■□□□□ 0.66
RAB40C-203ENST00000535977 LRRC4CQ9HCJ2 640 aa19.19■□□□□ 0.66
RAB40C-203ENST00000535977 RAVER2Q9HCJ3 691 aaKnown RBP19.19■□□□□ 0.66
RAB40C-203ENST00000535977 MYOZ2Q9NPC6 264 aa19.19■□□□□ 0.66
RAB40C-203ENST00000535977 ASTN2O75129 1339 aaPredicted RBP19.19■□□□□ 0.66
RAB40C-203ENST00000535977 TTC36A6NLP5 189 aa19.19■□□□□ 0.66
RAB40C-203ENST00000535977 DLG4P78352 724 aa19.19■□□□□ 0.66
RAB40C-203ENST00000535977 DDX42Q86XP3 938 aaKnown RBP eCLIP19.19■□□□□ 0.66
RAB40C-203ENST00000535977 ZNF317Q96PQ6 595 aaPredicted RBP19.19■□□□□ 0.66
RAB40C-203ENST00000535977 SENP7Q9BQF6 1050 aa19.19■□□□□ 0.66
RAB40C-203ENST00000535977 SLTMQ9NWH9 1034 aaKnown RBP eCLIP19.19■□□□□ 0.661e-6■■■□□ 16.2
RAB40C-203ENST00000535977 AMACRQ9UHK6 382 aa19.19■□□□□ 0.66
RAB40C-203ENST00000535977 MTA2O94776 668 aa19.18■□□□□ 0.66
RAB40C-203ENST00000535977 FTLP02792 175 aaPredicted RBP19.18■□□□□ 0.66
RAB40C-203ENST00000535977 ABCD1P33897 745 aa19.18■□□□□ 0.66
RAB40C-203ENST00000535977 RPS6P62753 249 aaKnown RBP19.18■□□□□ 0.66
RAB40C-203ENST00000535977 DHX34Q14147 1143 aaKnown RBP19.18■□□□□ 0.66
RAB40C-203ENST00000535977 ITIH4Q14624 930 aa19.18■□□□□ 0.66
RAB40C-203ENST00000535977 RASA3Q14644 834 aa19.18■□□□□ 0.66
RAB40C-203ENST00000535977 OTUD6AQ7L8S5 288 aa19.18■□□□□ 0.66
RAB40C-203ENST00000535977 TRPM8Q7Z2W7 1104 aa19.18■□□□□ 0.66
RAB40C-203ENST00000535977 EZH1Q92800 747 aaPredicted RBP19.18■□□□□ 0.66
RAB40C-203ENST00000535977 TAAR1Q96RJ0 339 aa19.18■□□□□ 0.66
RAB40C-203ENST00000535977 SYNGAP1Q96PV0 1343 aa19.18■□□□□ 0.66
RAB40C-203ENST00000535977 TULP1O00294 542 aaPredicted RBP19.18■□□□□ 0.66
RAB40C-203ENST00000535977 LRRN2O75325 713 aa19.18■□□□□ 0.66
RAB40C-203ENST00000535977 GGPS1O95749 300 aa19.18■□□□□ 0.66
RAB40C-203ENST00000535977 GTF2H1P32780 548 aa19.18■□□□□ 0.66
RAB40C-203ENST00000535977 GCLMP48507 274 aa19.18■□□□□ 0.66
RAB40C-203ENST00000535977 PEX3P56589 373 aa19.18■□□□□ 0.66
RAB40C-203ENST00000535977 POU5F1Q01860 360 aaKnown RBP19.18■□□□□ 0.66
RAB40C-203ENST00000535977 CXCL9Q07325 125 aa19.18■□□□□ 0.66
RAB40C-203ENST00000535977 C1orf220Q5T0J3 134 aa19.18■□□□□ 0.66
RAB40C-203ENST00000535977 CIAPIN1Q6FI81 312 aa19.18■□□□□ 0.66
RAB40C-203ENST00000535977 ZNF746Q6NUN9 644 aaPredicted RBP19.18■□□□□ 0.66
RAB40C-203ENST00000535977 FAM71AQ8IYT1 594 aa19.18■□□□□ 0.66
RAB40C-203ENST00000535977 TMC2Q8TDI7 906 aa19.18■□□□□ 0.66
RAB40C-203ENST00000535977 ARHGEF26Q96DR7 871 aa19.18■□□□□ 0.66
RAB40C-203ENST00000535977 NEUROG2Q9H2A3 272 aa19.18■□□□□ 0.66
RAB40C-203ENST00000535977 MAP3K13O43283 966 aa19.17■□□□□ 0.66
RAB40C-203ENST00000535977 ITGA4P13612 1032 aa19.17■□□□□ 0.66
RAB40C-203ENST00000535977 GCLCP48506 637 aaPredicted RBP19.17■□□□□ 0.66
RAB40C-203ENST00000535977 TAF11Q15544 211 aa19.17■□□□□ 0.66
RAB40C-203ENST00000535977 XKR9Q5GH70 373 aa19.17■□□□□ 0.66
RAB40C-203ENST00000535977 PIGWQ7Z7B1 504 aa19.17■□□□□ 0.66
RAB40C-203ENST00000535977 ARHGEF19Q8IW93 802 aa19.17■□□□□ 0.66
RAB40C-203ENST00000535977 SPIRE2Q8WWL2 714 aa19.17■□□□□ 0.66
RAB40C-203ENST00000535977 KIFAP3Q92845 792 aa19.17■□□□□ 0.66
RAB40C-203ENST00000535977 RMDN3Q96TC7 470 aa19.17■□□□□ 0.66
RAB40C-203ENST00000535977 PDCD2LQ9BRP1 358 aa19.17■□□□□ 0.66
RAB40C-203ENST00000535977 TMEM117Q9H0C3 514 aa19.17■□□□□ 0.66
RAB40C-203ENST00000535977 PXMP2Q9NR77 195 aa19.17■□□□□ 0.66
RAB40C-203ENST00000535977 ABCF3Q9NUQ8 709 aa19.17■□□□□ 0.66
RAB40C-203ENST00000535977 TAS2R14Q9NYV8 317 aa19.17■□□□□ 0.66
RAB40C-203ENST00000535977 CTTNBP2NLQ9P2B4 639 aa19.17■□□□□ 0.66
RAB40C-203ENST00000535977 ALG6Q9Y672 507 aa19.17■□□□□ 0.66
Retrieved 100 of 20,778 RNA–protein pairs in 94.2 ms