RNA–Protein interactions for RNA: ENST00000534551.2

VPS11-205, Transcript of VPS11, CORVET/HOPS core subunit, humanhuman

TSL 3

Gene VPS11, Length 585 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS11-205ENST00000534551 RWDD3Q9Y3V2 267 aa15.31■□□□□ 0.04
VPS11-205ENST00000534551 MTCH2Q9Y6C9 303 aa15.31■□□□□ 0.04
VPS11-205ENST00000534551 SCN1AP35498 2009 aa15.31■□□□□ 0.04
VPS11-205ENST00000534551 OGTO15294 1046 aa15.3■□□□□ 0.04
VPS11-205ENST00000534551 EIF3DO15371 548 aaKnown RBP eCLIP15.3■□□□□ 0.04
VPS11-205ENST00000534551 ALCAMQ13740 583 aa15.3■□□□□ 0.04
VPS11-205ENST00000534551 CCDC85BQ15834 202 aaPredicted RBP15.3■□□□□ 0.04
VPS11-205ENST00000534551 ENOX2Q16206 610 aaKnown RBP15.3■□□□□ 0.04
VPS11-205ENST00000534551 SLC10A6Q3KNW5 377 aa15.3■□□□□ 0.04
VPS11-205ENST00000534551 APBB1IPQ7Z5R6 666 aaPredicted RBP15.3■□□□□ 0.04
VPS11-205ENST00000534551 SPPL3Q8TCT6 385 aa15.3■□□□□ 0.04
VPS11-205ENST00000534551 NOC3LQ8WTT2 800 aaKnown RBP15.3■□□□□ 0.04
VPS11-205ENST00000534551 PPM1EQ8WY54 764 aa15.3■□□□□ 0.04
VPS11-205ENST00000534551 POMGNT1Q8WZA1 660 aa15.3■□□□□ 0.04
VPS11-205ENST00000534551 C18orf25Q96B23 403 aaPredicted RBP15.3■□□□□ 0.04
VPS11-205ENST00000534551 ACAP3Q96P50 834 aa15.3■□□□□ 0.04
VPS11-205ENST00000534551 FAM193BQ96PV7 902 aaPredicted RBP15.3■□□□□ 0.04
VPS11-205ENST00000534551 PLVAPQ9BX97 442 aa15.3■□□□□ 0.04
VPS11-205ENST00000534551 PCIF1Q9H4Z3 704 aa15.3■□□□□ 0.04
VPS11-205ENST00000534551 UBN1Q9NPG3 1134 aa15.3■□□□□ 0.04
VPS11-205ENST00000534551 TUBGCP4Q9UGJ1 667 aa15.3■□□□□ 0.04
VPS11-205ENST00000534551 MAPK8IP1Q9UQF2 711 aa15.3■□□□□ 0.04
VPS11-205ENST00000534551 PCDHB13Q9Y5F0 798 aa15.3■□□□□ 0.04
VPS11-205ENST00000534551 PCDHB12Q9Y5F1 795 aa15.3■□□□□ 0.04
VPS11-205ENST00000534551 XIRP2A4UGR9 3374 aa15.3■□□□□ 0.04
VPS11-205ENST00000534551 BRWD1Q9NSI6 2320 aa15.29■□□□□ 0.04
VPS11-205ENST00000534551 UBE4BO95155 1302 aa15.29■□□□□ 0.04
VPS11-205ENST00000534551 TGFB1I1O43294 461 aa15.29■□□□□ 0.04
VPS11-205ENST00000534551 KINO60870 393 aaKnown RBP15.29■□□□□ 0.04
VPS11-205ENST00000534551 SCP2P22307 547 aa15.29■□□□□ 0.04
VPS11-205ENST00000534551 OR1G1P47890 313 aa15.29■□□□□ 0.04
VPS11-205ENST00000534551 GUCY2FP51841 1108 aa15.29■□□□□ 0.04
VPS11-205ENST00000534551 BMT2Q1RMZ1 405 aa15.29■□□□□ 0.04
VPS11-205ENST00000534551 ARMCX5Q6P1M9 558 aa15.29■□□□□ 0.04
VPS11-205ENST00000534551 CRELD2Q6UXH1 353 aaPredicted RBP15.29■□□□□ 0.04
VPS11-205ENST00000534551 CLEC17AQ6ZS10 378 aa15.29■□□□□ 0.04
VPS11-205ENST00000534551 ADGRD2Q7Z7M1 963 aa15.29■□□□□ 0.04
VPS11-205ENST00000534551 ZNF507Q8TCN5 953 aa15.29■□□□□ 0.04
VPS11-205ENST00000534551 POF1BQ8WVV4 589 aa15.29■□□□□ 0.04
VPS11-205ENST00000534551 P2RX5Q93086 422 aa15.29■□□□□ 0.04
VPS11-205ENST00000534551 FAM212AQ96EL1 285 aa15.29■□□□□ 0.04
VPS11-205ENST00000534551 PPP1R10Q96QC0 940 aaKnown RBP15.29■□□□□ 0.04
VPS11-205ENST00000534551 AAASQ9NRG9 546 aa15.29■□□□□ 0.04
VPS11-205ENST00000534551 LMBRD1Q9NUN5 540 aa15.29■□□□□ 0.04
VPS11-205ENST00000534551 AGO2Q9UKV8 859 aaKnown RBP15.29■□□□□ 0.04
VPS11-205ENST00000534551 EXOC7Q9UPT5 735 aa15.29■□□□□ 0.04
VPS11-205ENST00000534551 STXBP5LQ9Y2K9 1186 aa15.29■□□□□ 0.04
VPS11-205ENST00000534551 STYXL1Q9Y6J8 313 aa15.29■□□□□ 0.04
VPS11-205ENST00000534551 UNC80Q8N2C7 3258 aa15.28■□□□□ 0.04
VPS11-205ENST00000534551 TULP1O00294 542 aaPredicted RBP15.28■□□□□ 0.04
VPS11-205ENST00000534551 NRP1O14786 923 aa15.28■□□□□ 0.04
VPS11-205ENST00000534551 CLIC2O15247 247 aa15.28■□□□□ 0.04
VPS11-205ENST00000534551 RHOBTB3O94955 611 aa15.28■□□□□ 0.04
VPS11-205ENST00000534551 KIF4AO95239 1232 aa15.28■□□□□ 0.04
VPS11-205ENST00000534551 MYL1P05976 194 aa15.28■□□□□ 0.04
VPS11-205ENST00000534551 RB1P06400 928 aa15.28■□□□□ 0.04
VPS11-205ENST00000534551 NFICP08651 508 aa15.28■□□□□ 0.04
VPS11-205ENST00000534551 ABCD1P33897 745 aa15.28■□□□□ 0.04
VPS11-205ENST00000534551 YARSP54577 528 aaKnown RBP15.28■□□□□ 0.04
VPS11-205ENST00000534551 TUSC3Q13454 348 aa15.28■□□□□ 0.04
VPS11-205ENST00000534551 XKR4Q5GH76 650 aa15.28■□□□□ 0.04
VPS11-205ENST00000534551 ALKAL1Q6UXT8 129 aa15.28■□□□□ 0.04
VPS11-205ENST00000534551 STXBP4Q6ZWJ1 553 aa15.28■□□□□ 0.04
VPS11-205ENST00000534551 MAFAQ8NHW3 353 aaPredicted RBP15.28■□□□□ 0.04
VPS11-205ENST00000534551 AUTS2Q8WXX7 1259 aa15.28■□□□□ 0.04
VPS11-205ENST00000534551 IGSF21Q96ID5 467 aa15.28■□□□□ 0.04
VPS11-205ENST00000534551 TIGD1Q96MW7 591 aa15.28■□□□□ 0.04
VPS11-205ENST00000534551 FAM213AQ9BRX8 229 aa15.28■□□□□ 0.04
VPS11-205ENST00000534551 TMEM175Q9BSA9 504 aa15.28■□□□□ 0.04
VPS11-205ENST00000534551 AGPAT3Q9NRZ7 376 aa15.28■□□□□ 0.04
VPS11-205ENST00000534551 TOPORSQ9NS56 1045 aaPredicted RBP15.28■□□□□ 0.04
VPS11-205ENST00000534551 SPG21Q9NZD8 308 aa15.28■□□□□ 0.04
VPS11-205ENST00000534551 CNTN3Q9P232 1028 aa15.28■□□□□ 0.04
VPS11-205ENST00000534551 KANSL3Q9P2N6 904 aa15.28■□□□□ 0.04
VPS11-205ENST00000534551 CPSF3Q9UKF6 684 aaKnown RBP15.28■□□□□ 0.04
VPS11-205ENST00000534551 PCDHA5Q9Y5H7 936 aa15.28■□□□□ 0.04
VPS11-205ENST00000534551 SMIM28A0A1B0GU29 152 aa15.27■□□□□ 0.04
VPS11-205ENST00000534551 TTC26A0AVF1 554 aa15.27■□□□□ 0.04
VPS11-205ENST00000534551 LACTBL1A8MY62 500 aa15.27■□□□□ 0.04
VPS11-205ENST00000534551 THP07101 528 aa15.27■□□□□ 0.04
VPS11-205ENST00000534551 ADRB2P07550 413 aa15.27■□□□□ 0.04
VPS11-205ENST00000534551 CLTAP09496 248 aa15.27■□□□□ 0.04
VPS11-205ENST00000534551 ALDH7A1P49419 539 aaKnown RBP15.27■□□□□ 0.04
VPS11-205ENST00000534551 CYP2J2P51589 502 aa15.27■□□□□ 0.04
VPS11-205ENST00000534551 ERVFC1P60507 584 aa15.27■□□□□ 0.04
VPS11-205ENST00000534551 PPP2R3AQ06190 1150 aa15.27■□□□□ 0.04
VPS11-205ENST00000534551 KCNB1Q14721 858 aa15.27■□□□□ 0.04
VPS11-205ENST00000534551 CAMK4Q16566 473 aa15.27■□□□□ 0.04
VPS11-205ENST00000534551 PLPP4Q5VZY2 271 aa15.27■□□□□ 0.04
VPS11-205ENST00000534551 ISM2Q6H9L7 571 aa15.27■□□□□ 0.04
VPS11-205ENST00000534551 C3orf58Q8NDZ4 430 aa15.27■□□□□ 0.04
VPS11-205ENST00000534551 MRPL38Q96DV4 380 aaKnown RBP15.27■□□□□ 0.04
VPS11-205ENST00000534551 B3GALT6Q96L58 329 aa15.27■□□□□ 0.04
VPS11-205ENST00000534551 GBP4Q96PP9 640 aa15.27■□□□□ 0.04
VPS11-205ENST00000534551 TMEM206Q9H813 350 aa15.27■□□□□ 0.04
VPS11-205ENST00000534551 RPF1Q9H9Y2 349 aaKnown RBP15.27■□□□□ 0.04
VPS11-205ENST00000534551 PRDM6Q9NQX0 595 aa15.27■□□□□ 0.04
VPS11-205ENST00000534551 MAN1B1Q9UKM7 699 aa15.27■□□□□ 0.04
VPS11-205ENST00000534551 GTF2F1P35269 517 aaKnown RBP eCLIP15.26■□□□□ 0.03
VPS11-205ENST00000534551 PPM1AP35813 382 aa15.26■□□□□ 0.03
Retrieved 100 of 20,778 RNA–protein pairs in 92.9 ms