RNA–Protein interactions for RNA: ENST00000531341.1

CHKA-206, Transcript of choline kinase alpha, humanhuman

TSL 3

Gene CHKA, Length 524 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHKA-206ENST00000531341 FAM170BA6NMN3 283 aa23.31■■□□□ 1.32
CHKA-206ENST00000531341 USO1O60763 962 aaKnown RBP23.31■■□□□ 1.32
CHKA-206ENST00000531341 KINO60870 393 aaKnown RBP23.31■■□□□ 1.32
CHKA-206ENST00000531341 EDN1P05305 212 aa23.31■■□□□ 1.32
CHKA-206ENST00000531341 HNRNPA1P09651 372 aaKnown RBP eCLIP23.31■■□□□ 1.32
CHKA-206ENST00000531341 CSTF1Q05048 431 aaKnown RBP23.31■■□□□ 1.32
CHKA-206ENST00000531341 RSPO4Q2I0M5 234 aaPredicted RBP23.31■■□□□ 1.32
CHKA-206ENST00000531341 LIN9Q5TKA1 542 aa23.31■■□□□ 1.32
CHKA-206ENST00000531341 SLC7A14Q8TBB6 771 aa23.31■■□□□ 1.32
CHKA-206ENST00000531341 BCO2Q9BYV7 579 aa23.31■■□□□ 1.32
CHKA-206ENST00000531341 FZD8Q9H461 694 aa23.31■■□□□ 1.32
CHKA-206ENST00000531341 DNMT3BQ9UBC3 853 aaKnown RBP23.31■■□□□ 1.32
CHKA-206ENST00000531341 ZMYM2Q9UBW7 1377 aa23.3■■□□□ 1.32
CHKA-206ENST00000531341 CEP250Q9BV73 2442 aa23.3■■□□□ 1.32
CHKA-206ENST00000531341 LRRIQ4A6NIV6 560 aa23.3■■□□□ 1.32
CHKA-206ENST00000531341 AXDND1Q5T1B0 1012 aaPredicted RBP23.3■■□□□ 1.32
CHKA-206ENST00000531341 PPP4R3CPQ6ZMV5 832 aa23.3■■□□□ 1.32
CHKA-206ENST00000531341 MTSS1LQ765P7 747 aa23.3■■□□□ 1.32
CHKA-206ENST00000531341 PLA2G2FQ9BZM2 168 aa23.3■■□□□ 1.32
CHKA-206ENST00000531341 PDZD7Q9H5P4 517 aa23.3■■□□□ 1.32
CHKA-206ENST00000531341 TTC12Q9H892 705 aaPredicted RBP23.3■■□□□ 1.32
CHKA-206ENST00000531341 TPCN1Q9ULQ1 816 aa23.3■■□□□ 1.32
CHKA-206ENST00000531341 STK36Q9NRP7 1315 aa23.3■■□□□ 1.32
CHKA-206ENST00000531341 ZFHX4Q86UP3 3567 aa23.3■■□□□ 1.32
CHKA-206ENST00000531341 LAMTOR5O43504 91 aa23.29■■□□□ 1.32
CHKA-206ENST00000531341 THP07101 528 aa23.29■■□□□ 1.32
CHKA-206ENST00000531341 HOXA9P31269 272 aa23.29■■□□□ 1.32
CHKA-206ENST00000531341 OR1D2P34982 312 aa23.29■■□□□ 1.32
CHKA-206ENST00000531341 TXKP42681 527 aa23.29■■□□□ 1.32
CHKA-206ENST00000531341 PRKCQQ04759 706 aa23.29■■□□□ 1.32
CHKA-206ENST00000531341 ZNF528Q3MIS6 628 aa23.29■■□□□ 1.32
CHKA-206ENST00000531341 NOSTRINQ8IVI9 506 aa23.29■■□□□ 1.32
CHKA-206ENST00000531341 NPAS3Q8IXF0 933 aa23.29■■□□□ 1.32
CHKA-206ENST00000531341 ING5Q8WYH8 240 aa23.29■■□□□ 1.32
CHKA-206ENST00000531341 LTB4R2Q9NPC1 389 aa23.29■■□□□ 1.32
CHKA-206ENST00000531341 PRMT7Q9NVM4 692 aaPredicted RBP23.29■■□□□ 1.32
CHKA-206ENST00000531341 FBXO4Q9UKT5 387 aa23.29■■□□□ 1.32
CHKA-206ENST00000531341 SHISA7A6NL88 538 aa23.28■■□□□ 1.32
CHKA-206ENST00000531341 CDKL5O76039 1030 aa23.28■■□□□ 1.32
CHKA-206ENST00000531341 RECQL4O94761 1208 aa23.28■■□□□ 1.32
CHKA-206ENST00000531341 FDPSP14324 419 aaKnown RBP23.28■■□□□ 1.32
CHKA-206ENST00000531341 XBP1P17861 261 aa23.28■■□□□ 1.32
CHKA-206ENST00000531341 CALCRLQ16602 461 aa23.28■■□□□ 1.32
CHKA-206ENST00000531341 VARS2Q5ST30 1063 aaKnown RBP23.28■■□□□ 1.32
CHKA-206ENST00000531341 CDCA2Q69YH5 1023 aaPredicted RBP23.28■■□□□ 1.32
CHKA-206ENST00000531341 TSSK4Q6SA08 328 aa23.28■■□□□ 1.32
CHKA-206ENST00000531341 CD300LGQ6UXG3 332 aa23.28■■□□□ 1.32
CHKA-206ENST00000531341 BSNDQ8WZ55 320 aa23.28■■□□□ 1.32
CHKA-206ENST00000531341 NOTCH4Q99466 2003 aa23.28■■□□□ 1.32
CHKA-206ENST00000531341 PFKFB2O60825 505 aa23.27■■□□□ 1.32
CHKA-206ENST00000531341 XYLBO75191 536 aa23.27■■□□□ 1.32
CHKA-206ENST00000531341 SPATA31C1P0DKV0 1188 aa23.27■■□□□ 1.32
CHKA-206ENST00000531341 TARSP26639 723 aaKnown RBP23.27■■□□□ 1.32
CHKA-206ENST00000531341 FZD5Q13467 585 aa23.27■■□□□ 1.32
CHKA-206ENST00000531341 RAB33AQ14088 237 aa23.27■■□□□ 1.32
CHKA-206ENST00000531341 FAM187BQ17R55 369 aa23.27■■□□□ 1.32
CHKA-206ENST00000531341 MCRS1Q96EZ8 462 aa23.27■■□□□ 1.32
CHKA-206ENST00000531341 PRIMPOLQ96LW4 560 aa23.27■■□□□ 1.32
CHKA-206ENST00000531341 CCDC43Q96MW1 224 aaKnown RBP23.27■■□□□ 1.32
CHKA-206ENST00000531341 MTMR9Q96QG7 549 aa23.27■■□□□ 1.32
CHKA-206ENST00000531341 OSBPL6Q9BZF3 934 aa23.27■■□□□ 1.32
CHKA-206ENST00000531341 ORC3Q9UBD5 711 aaPredicted RBP23.27■■□□□ 1.32
CHKA-206ENST00000531341 VWA8A3KMH1 1905 aa23.26■■□□□ 1.31
CHKA-206ENST00000531341 KRT2P35908 639 aa23.26■■□□□ 1.31
CHKA-206ENST00000531341 SLC5A9Q2M3M2 681 aa23.26■■□□□ 1.31
CHKA-206ENST00000531341 PABPC1LQ4VXU2 614 aaKnown RBP23.26■■□□□ 1.31
CHKA-206ENST00000531341 EEF1DP3Q658K8 133 aa23.26■■□□□ 1.31
CHKA-206ENST00000531341 TPRG1Q6ZUI0 275 aa23.26■■□□□ 1.31
CHKA-206ENST00000531341 ZBTB44Q8NCP5 570 aa23.26■■□□□ 1.31
CHKA-206ENST00000531341 MIA3Q5JRA6 1907 aa23.25■■□□□ 1.31
CHKA-206ENST00000531341 PATJQ8NI35 1801 aa23.25■■□□□ 1.31
CHKA-206ENST00000531341 NRG2O14511 850 aaPredicted RBP23.25■■□□□ 1.31
CHKA-206ENST00000531341 ATP2B1P20020 1258 aa23.25■■□□□ 1.31
CHKA-206ENST00000531341 FGFR3P22607 806 aa23.25■■□□□ 1.31
CHKA-206ENST00000531341 UVSSAQ2YD98 709 aa23.25■■□□□ 1.31
CHKA-206ENST00000531341 GLRA4Q5JXX5 417 aa23.25■■□□□ 1.31
CHKA-206ENST00000531341 PDZRN4Q6ZMN7 1036 aaPredicted RBP23.25■■□□□ 1.31
CHKA-206ENST00000531341 CLDN23Q96B33 292 aa23.25■■□□□ 1.31
CHKA-206ENST00000531341 CNTNAP3BQ96NU0 1288 aa23.25■■□□□ 1.31
CHKA-206ENST00000531341 CNTNAP3Q9BZ76 1288 aa23.25■■□□□ 1.31
CHKA-206ENST00000531341 TMEM60Q9H2L4 133 aa23.25■■□□□ 1.31
CHKA-206ENST00000531341 POLD4Q9HCU8 107 aa23.25■■□□□ 1.31
CHKA-206ENST00000531341 HEBP1Q9NRV9 189 aa23.25■■□□□ 1.31
CHKA-206ENST00000531341 NCDNQ9UBB6 729 aa23.25■■□□□ 1.31
CHKA-206ENST00000531341 MTRRQ9UBK8 725 aa23.25■■□□□ 1.31
CHKA-206ENST00000531341 KCNH3Q9ULD8 1083 aa23.25■■□□□ 1.31
CHKA-206ENST00000531341 GDAQ9Y2T3 454 aa23.25■■□□□ 1.31
CHKA-206ENST00000531341 CDY1Q9Y6F8 540 aa23.25■■□□□ 1.31
CHKA-206ENST00000531341 N4BP3O15049 544 aa23.24■■□□□ 1.31
CHKA-206ENST00000531341 SPTLC1O15269 473 aa23.24■■□□□ 1.31
CHKA-206ENST00000531341 EPB41L2O43491 1005 aaKnown RBP23.24■■□□□ 1.31
CHKA-206ENST00000531341 MED24O75448 989 aa23.24■■□□□ 1.31
CHKA-206ENST00000531341 POU2F2P09086 479 aa23.24■■□□□ 1.31
CHKA-206ENST00000531341 XRCC6P12956 609 aaKnown RBP eCLIP23.24■■□□□ 1.31
CHKA-206ENST00000531341 LIG1P18858 919 aa23.24■■□□□ 1.31
CHKA-206ENST00000531341 CLCNKBP51801 687 aa23.24■■□□□ 1.31
CHKA-206ENST00000531341 PFKPQ01813 784 aa23.24■■□□□ 1.31
CHKA-206ENST00000531341 PRPF4BQ13523 1007 aaKnown RBP23.24■■□□□ 1.31
CHKA-206ENST00000531341 ZBTB41Q5SVQ8 909 aa23.24■■□□□ 1.31
CHKA-206ENST00000531341 TANGO2Q6ICL3 276 aa23.24■■□□□ 1.31
Retrieved 100 of 20,778 RNA–protein pairs in 34.5 ms