RNA–Protein interactions for RNA: ENST00000522165.5

COL13A1-214, Transcript of collagen type XIII alpha 1 chain, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene COL13A1, Length 2,061 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL13A1-214ENST00000522165 MAMDC4Q6UXC1 1216 aa27.85■■■□□ 2.05
COL13A1-214ENST00000522165 ZNF467Q7Z7K2 595 aaPredicted RBP27.85■■■□□ 2.05
COL13A1-214ENST00000522165 C2orf40Q9H1Z8 148 aa27.85■■■□□ 2.05
COL13A1-214ENST00000522165 ERAP1Q9NZ08 941 aa27.85■■■□□ 2.05
COL13A1-214ENST00000522165 RBM47A0AV96 593 aaKnown RBP27.85■■■□□ 2.05
COL13A1-214ENST00000522165 VNN1O95497 513 aa27.85■■■□□ 2.05
COL13A1-214ENST00000522165 PRKCBP05771 671 aa27.85■■■□□ 2.05
COL13A1-214ENST00000522165 GJC2Q5T442 439 aaPredicted RBP27.85■■■□□ 2.05
COL13A1-214ENST00000522165 ACO2Q99798 780 aaKnown RBP27.85■■■□□ 2.05
COL13A1-214ENST00000522165 LRRC1Q9BTT6 524 aa27.85■■■□□ 2.05
COL13A1-214ENST00000522165 MAP2K7O14733 419 aa27.84■■■□□ 2.05
COL13A1-214ENST00000522165 GH1P01241 217 aa27.84■■■□□ 2.05
COL13A1-214ENST00000522165 MMEP08473 750 aa27.84■■■□□ 2.05
COL13A1-214ENST00000522165 PIK3CAP42336 1068 aa27.84■■■□□ 2.05
COL13A1-214ENST00000522165 PDE6CP51160 858 aa27.84■■■□□ 2.05
COL13A1-214ENST00000522165 BIRC3Q13489 604 aa27.84■■■□□ 2.05
COL13A1-214ENST00000522165 MAPK6Q16659 721 aa27.84■■■□□ 2.05
COL13A1-214ENST00000522165 WDR44Q5JSH3 913 aa27.84■■■□□ 2.05
COL13A1-214ENST00000522165 SPRYD7Q5W111 196 aa27.84■■■□□ 2.05
COL13A1-214ENST00000522165 RHPN2Q8IUC4 686 aa27.84■■■□□ 2.05
COL13A1-214ENST00000522165 RHOT2Q8IXI1 618 aa27.84■■■□□ 2.05
COL13A1-214ENST00000522165 C2orf69Q8N8R5 385 aa27.84■■■□□ 2.05
COL13A1-214ENST00000522165 RNPEPQ9H4A4 650 aa27.84■■■□□ 2.05
COL13A1-214ENST00000522165 FAM170AA1A519 330 aa27.83■■■□□ 2.05
COL13A1-214ENST00000522165 FAM189A1O60320 539 aa27.83■■■□□ 2.05
COL13A1-214ENST00000522165 HARSP12081 509 aaKnown RBP27.83■■■□□ 2.05
COL13A1-214ENST00000522165 HADHBP55084 474 aaKnown RBP27.83■■■□□ 2.05
COL13A1-214ENST00000522165 CDR2Q01850 454 aa27.83■■■□□ 2.05
COL13A1-214ENST00000522165 TCEAL1Q15170 157 aa27.83■■■□□ 2.05
COL13A1-214ENST00000522165 PTPROQ16827 1216 aa27.83■■■□□ 2.05
COL13A1-214ENST00000522165 KATNBL1Q9H079 304 aa27.83■■■□□ 2.05
COL13A1-214ENST00000522165 CDKN2AIPQ9NXV6 580 aaPredicted RBP27.83■■■□□ 2.05
COL13A1-214ENST00000522165 COG5Q9UP83 839 aa27.83■■■□□ 2.05
COL13A1-214ENST00000522165 SEZ6Q53EL9 994 aa27.83■■■□□ 2.05
COL13A1-214ENST00000522165 EFCAB12Q6NXP0 572 aa27.83■■■□□ 2.05
COL13A1-214ENST00000522165 BRSK2Q8IWQ3 736 aa27.83■■■□□ 2.05
COL13A1-214ENST00000522165 DDX1Q92499 740 aaKnown RBP27.83■■■□□ 2.05
COL13A1-214ENST00000522165 HES6Q96HZ4 224 aa27.83■■■□□ 2.05
COL13A1-214ENST00000522165 AMFRQ9UKV5 643 aa27.83■■■□□ 2.05
COL13A1-214ENST00000522165 LGALS2P05162 132 aa27.82■■■□□ 2.04
COL13A1-214ENST00000522165 TFDP1Q14186 410 aa27.82■■■□□ 2.04
COL13A1-214ENST00000522165 HDXQ7Z353 690 aa27.82■■■□□ 2.04
COL13A1-214ENST00000522165 GPR142Q7Z601 462 aa27.82■■■□□ 2.04
COL13A1-214ENST00000522165 ZBTB33Q86T24 672 aa27.82■■■□□ 2.04
COL13A1-214ENST00000522165 METTL13Q8N6R0 699 aa27.82■■■□□ 2.04
COL13A1-214ENST00000522165 RUBCNQ92622 972 aa27.82■■■□□ 2.04
COL13A1-214ENST00000522165 ZMYND10O75800 440 aa27.82■■■□□ 2.04
COL13A1-214ENST00000522165 CELF2O95319 508 aaKnown RBP27.82■■■□□ 2.04
COL13A1-214ENST00000522165 KRT5P13647 590 aa27.82■■■□□ 2.04
COL13A1-214ENST00000522165 GPC5P78333 572 aa27.82■■■□□ 2.04
COL13A1-214ENST00000522165 USP38Q8NB14 1042 aa27.82■■■□□ 2.04
COL13A1-214ENST00000522165 PPTC7Q8NI37 304 aa27.82■■■□□ 2.04
COL13A1-214ENST00000522165 HDAC7Q8WUI4 952 aa27.82■■■□□ 2.04
COL13A1-214ENST00000522165 CALR3Q96L12 384 aaKnown RBP27.82■■■□□ 2.04
COL13A1-214ENST00000522165 TCHPQ9BT92 498 aa27.82■■■□□ 2.04
COL13A1-214ENST00000522165 ABLIM1O14639 778 aa27.81■■■□□ 2.04
COL13A1-214ENST00000522165 C22orf31O95567 290 aa27.81■■■□□ 2.04
COL13A1-214ENST00000522165 SNAI1O95863 264 aaPredicted RBP27.81■■■□□ 2.04
COL13A1-214ENST00000522165 GJB1P08034 283 aa27.81■■■□□ 2.04
COL13A1-214ENST00000522165 CLCN3P51790 818 aa27.81■■■□□ 2.04
COL13A1-214ENST00000522165 ZNF484Q5JVG2 852 aa27.81■■■□□ 2.04
COL13A1-214ENST00000522165 EMID1Q96A84 441 aaPredicted RBP27.81■■■□□ 2.04
COL13A1-214ENST00000522165 ZBTB10Q96DT7 871 aa27.81■■■□□ 2.04
COL13A1-214ENST00000522165 PARK7Q99497 189 aaKnown RBP27.81■■■□□ 2.04
COL13A1-214ENST00000522165 PTPN18Q99952 460 aa27.81■■■□□ 2.04
COL13A1-214ENST00000522165 SELENOOQ9BVL4 669 aa27.81■■■□□ 2.04
COL13A1-214ENST00000522165 TNFSF9P41273 254 aa27.8■■■□□ 2.04
COL13A1-214ENST00000522165 MCL1Q07820 350 aa27.8■■■□□ 2.04
COL13A1-214ENST00000522165 GRB14Q14449 540 aa27.8■■■□□ 2.04
COL13A1-214ENST00000522165 OR5B17Q8NGF7 314 aa27.8■■■□□ 2.04
COL13A1-214ENST00000522165 ACTRT1Q8TDG2 376 aa27.8■■■□□ 2.04
COL13A1-214ENST00000522165 DMGDHQ9UI17 866 aaKnown RBP27.8■■■□□ 2.04
COL13A1-214ENST00000522165 OGTO15294 1046 aa27.8■■■□□ 2.04
COL13A1-214ENST00000522165 ADCYAP1R1P41586 468 aa27.8■■■□□ 2.04
COL13A1-214ENST00000522165 GRM1Q13255 1194 aa27.8■■■□□ 2.04
COL13A1-214ENST00000522165 MAP9Q49MG5 647 aa27.8■■■□□ 2.04
COL13A1-214ENST00000522165 GLE1Q53GS7 698 aaKnown RBP27.8■■■□□ 2.04
COL13A1-214ENST00000522165 SPOPLQ6IQ16 392 aa27.8■■■□□ 2.04
COL13A1-214ENST00000522165 CCNI2Q6ZMN8 369 aaPredicted RBP27.8■■■□□ 2.04
COL13A1-214ENST00000522165 NLRP4Q96MN2 994 aa27.8■■■□□ 2.04
COL13A1-214ENST00000522165 FZD8Q9H461 694 aa27.8■■■□□ 2.04
COL13A1-214ENST00000522165 ASAP2O43150 1006 aa27.79■■■□□ 2.04
COL13A1-214ENST00000522165 CEP104O60308 925 aa27.79■■■□□ 2.04
COL13A1-214ENST00000522165 INSRRP14616 1297 aa27.79■■■□□ 2.04
COL13A1-214ENST00000522165 RNASE9P60153 205 aaKnown RBP27.79■■■□□ 2.04
COL13A1-214ENST00000522165 C8orf74Q6P047 294 aa27.79■■■□□ 2.04
COL13A1-214ENST00000522165 DPP9Q86TI2 863 aa27.79■■■□□ 2.04
COL13A1-214ENST00000522165 AFG1LQ8WV93 481 aa27.79■■■□□ 2.04
COL13A1-214ENST00000522165 RRAGCQ9HB90 399 aa27.79■■■□□ 2.04
COL13A1-214ENST00000522165 APOBEC3GQ9HC16 384 aaKnown RBP27.79■■■□□ 2.04
COL13A1-214ENST00000522165 CTTNBP2NLQ9P2B4 639 aa27.79■■■□□ 2.04
COL13A1-214ENST00000522165 TMEM59LQ9UK28 342 aa27.79■■■□□ 2.04
COL13A1-214ENST00000522165 ACKR2O00590 384 aa27.79■■■□□ 2.04
COL13A1-214ENST00000522165 PROZP22891 400 aa27.79■■■□□ 2.04
COL13A1-214ENST00000522165 PTENP60484 403 aa27.79■■■□□ 2.04
COL13A1-214ENST00000522165 FAM110CQ1W6H9 321 aa27.79■■■□□ 2.04
COL13A1-214ENST00000522165 TSHZ1Q6ZSZ6 1077 aa27.79■■■□□ 2.04
COL13A1-214ENST00000522165 UBXN6Q9BZV1 441 aa27.79■■■□□ 2.04
COL13A1-214ENST00000522165 AP3M2P53677 418 aa27.78■■■□□ 2.04
COL13A1-214ENST00000522165 ZNF668Q96K58 619 aaPredicted RBP27.78■■■□□ 2.04
Retrieved 100 of 20,778 RNA–protein pairs in 37.7 ms