RNA–Protein interactions for RNA: ENST00000519479.1

PCDHGB4-201, Transcript of protocadherin gamma subfamily B, 4, humanhuman

TSL 1 (best) BASIC

Gene PCDHGB4, Length 4,578 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHGB4-201ENST00000519479 TROVE2P10155 538 aaKnown RBP eCLIP12□□□□□ -0.49
PCDHGB4-201ENST00000519479 HSD17B3P37058 310 aa12□□□□□ -0.49
PCDHGB4-201ENST00000519479 CCDC14Q49A88 953 aa12□□□□□ -0.49
PCDHGB4-201ENST00000519479 NUGGCQ68CJ6 796 aa12□□□□□ -0.49
PCDHGB4-201ENST00000519479 RNF149Q8NC42 400 aa12□□□□□ -0.49
PCDHGB4-201ENST00000519479 OTUD5Q96G74 571 aa12□□□□□ -0.49
PCDHGB4-201ENST00000519479 POP1Q99575 1024 aaKnown RBP12□□□□□ -0.49
PCDHGB4-201ENST00000519479 AGO4Q9HCK5 861 aaKnown RBP12□□□□□ -0.49
PCDHGB4-201ENST00000519479 PPP1R9AQ9ULJ8 1098 aa12□□□□□ -0.49
PCDHGB4-201ENST00000519479 PCDHB2Q9Y5E7 798 aa12□□□□□ -0.49
PCDHGB4-201ENST00000519479 TMEM150BA6NC51 233 aa11.99□□□□□ -0.49
PCDHGB4-201ENST00000519479 TRIM66O15016 1216 aa11.99□□□□□ -0.49
PCDHGB4-201ENST00000519479 HLA-DRAP01903 254 aa11.99□□□□□ -0.49
PCDHGB4-201ENST00000519479 PCNX4Q63HM2 1172 aa11.99□□□□□ -0.49
PCDHGB4-201ENST00000519479 XRRA1Q6P2D8 792 aa11.99□□□□□ -0.49
PCDHGB4-201ENST00000519479 SCYL3Q8IZE3 742 aa11.99□□□□□ -0.49
PCDHGB4-201ENST00000519479 C7orf31Q8N865 590 aa11.99□□□□□ -0.49
PCDHGB4-201ENST00000519479 PDCD2LQ9BRP1 358 aa11.99□□□□□ -0.49
PCDHGB4-201ENST00000519479 SYT17Q9BSW7 474 aa11.99□□□□□ -0.49
PCDHGB4-201ENST00000519479 WDR18Q9BV38 432 aa11.99□□□□□ -0.49
PCDHGB4-201ENST00000519479 MLXIPLQ9NP71 852 aa11.99□□□□□ -0.49
PCDHGB4-201ENST00000519479 DUOX1Q9NRD9 1551 aa11.99□□□□□ -0.49
PCDHGB4-201ENST00000519479 PSMD10O75832 226 aa11.99□□□□□ -0.49
PCDHGB4-201ENST00000519479 VCAM1P19320 739 aa11.99□□□□□ -0.49
PCDHGB4-201ENST00000519479 GPC3P51654 580 aa11.99□□□□□ -0.49
PCDHGB4-201ENST00000519479 BBS9Q3SYG4 887 aa11.99□□□□□ -0.49
PCDHGB4-201ENST00000519479 CCDC38Q502W7 563 aa11.99□□□□□ -0.49
PCDHGB4-201ENST00000519479 HYIQ5T013 277 aa11.99□□□□□ -0.49
PCDHGB4-201ENST00000519479 ANKRD20A3Q5VUR7 823 aa11.99□□□□□ -0.49
PCDHGB4-201ENST00000519479 TATDN1Q6P1N9 297 aa11.99□□□□□ -0.49
PCDHGB4-201ENST00000519479 MAD1L1Q9Y6D9 718 aa11.99□□□□□ -0.49
PCDHGB4-201ENST00000519479 A0A0A6YYK5 440 aaPredicted RBP11.99□□□□□ -0.49
PCDHGB4-201ENST00000519479 LSP1P33241 339 aa11.99□□□□□ -0.49
PCDHGB4-201ENST00000519479 SNAPC2Q13487 334 aa11.99□□□□□ -0.49
PCDHGB4-201ENST00000519479 DUOXA2Q1HG44 320 aa11.99□□□□□ -0.49
PCDHGB4-201ENST00000519479 FAM133BQ5BKY9 247 aaKnown RBP11.99□□□□□ -0.49
PCDHGB4-201ENST00000519479 MUM1L1Q5H9M0 696 aa11.99□□□□□ -0.49
PCDHGB4-201ENST00000519479 ICE2Q659A1 982 aa11.99□□□□□ -0.49
PCDHGB4-201ENST00000519479 RPAINQ86UA6 219 aa11.99□□□□□ -0.49
PCDHGB4-201ENST00000519479 GPRASP2Q96D09 838 aa11.99□□□□□ -0.49
PCDHGB4-201ENST00000519479 TARS2Q9BW92 718 aaKnown RBP11.99□□□□□ -0.49
PCDHGB4-201ENST00000519479 TMEM117Q9H0C3 514 aa11.99□□□□□ -0.49
PCDHGB4-201ENST00000519479 I3L4J1 428 aa11.99□□□□□ -0.49
PCDHGB4-201ENST00000519479 ZNF263O14978 683 aa11.99□□□□□ -0.49
PCDHGB4-201ENST00000519479 ITGA4P13612 1032 aa11.99□□□□□ -0.49
PCDHGB4-201ENST00000519479 ACTR2P61160 394 aa11.99□□□□□ -0.49
PCDHGB4-201ENST00000519479 CBWD6Q4V339 395 aa11.99□□□□□ -0.49
PCDHGB4-201ENST00000519479 CBWD3Q5JTY5 395 aa11.99□□□□□ -0.49
PCDHGB4-201ENST00000519479 CBWD5Q5RIA9 395 aa11.99□□□□□ -0.49
PCDHGB4-201ENST00000519479 TEX2Q8IWB9 1127 aa11.99□□□□□ -0.49
PCDHGB4-201ENST00000519479 SRRM1Q8IYB3 904 aaKnown RBP11.99□□□□□ -0.49
PCDHGB4-201ENST00000519479 HVCN1Q96D96 273 aa11.99□□□□□ -0.49
PCDHGB4-201ENST00000519479 SNF8Q96H20 258 aa11.99□□□□□ -0.49
PCDHGB4-201ENST00000519479 BTBD6Q96KE9 485 aa11.99□□□□□ -0.49
PCDHGB4-201ENST00000519479 EPN3Q9H201 632 aa11.99□□□□□ -0.49
PCDHGB4-201ENST00000519479 GANQ9H2C0 597 aa11.99□□□□□ -0.49
PCDHGB4-201ENST00000519479 IP6K2Q9UHH9 426 aa11.99□□□□□ -0.49
PCDHGB4-201ENST00000519479 GTF3C4Q9UKN8 822 aa11.99□□□□□ -0.49
PCDHGB4-201ENST00000519479 PCDHGC5Q9Y5F6 944 aa11.99□□□□□ -0.49
PCDHGB4-201ENST00000519479 ASTN1O14525 1302 aa11.98□□□□□ -0.49
PCDHGB4-201ENST00000519479 ABCA3Q99758 1704 aa11.98□□□□□ -0.49
PCDHGB4-201ENST00000519479 PI4K2BG5E9Z4 385 aa11.98□□□□□ -0.49
PCDHGB4-201ENST00000519479 WNT10BO00744 389 aa11.98□□□□□ -0.49
PCDHGB4-201ENST00000519479 SEC24CP53992 1094 aa11.98□□□□□ -0.49
PCDHGB4-201ENST00000519479 CAV1Q03135 178 aa11.98□□□□□ -0.49
PCDHGB4-201ENST00000519479 NCOA4Q13772 614 aa11.98□□□□□ -0.49
PCDHGB4-201ENST00000519479 DARS2Q6PI48 645 aaKnown RBP11.98□□□□□ -0.49
PCDHGB4-201ENST00000519479 MMS22LQ6ZRQ5 1243 aa11.98□□□□□ -0.49
PCDHGB4-201ENST00000519479 CENPUQ71F23 418 aa11.98□□□□□ -0.49
PCDHGB4-201ENST00000519479 RDM1Q8NG50 284 aa11.98□□□□□ -0.49
PCDHGB4-201ENST00000519479 ARHGEF2Q92974 986 aaKnown RBP11.98□□□□□ -0.49
PCDHGB4-201ENST00000519479 CCT8L2Q96SF2 557 aa11.98□□□□□ -0.49
PCDHGB4-201ENST00000519479 KLHL11Q9NVR0 708 aa11.98□□□□□ -0.49
PCDHGB4-201ENST00000519479 SYNJ2BP-COX16A0A087WUM0 186 aa11.98□□□□□ -0.49
PCDHGB4-201ENST00000519479 PIK3CDO00329 1044 aa11.98□□□□□ -0.49
PCDHGB4-201ENST00000519479 KIAA0391O15091 583 aaKnown RBP11.98□□□□□ -0.49
PCDHGB4-201ENST00000519479 INHBAP08476 426 aa11.98□□□□□ -0.49
PCDHGB4-201ENST00000519479 SLC1A1P43005 524 aa11.98□□□□□ -0.49
PCDHGB4-201ENST00000519479 BYSLQ13895 437 aaKnown RBP11.98□□□□□ -0.49
PCDHGB4-201ENST00000519479 MYBPC2Q14324 1141 aa11.98□□□□□ -0.49
PCDHGB4-201ENST00000519479 PPP2R5DQ14738 602 aa11.98□□□□□ -0.49
PCDHGB4-201ENST00000519479 CDO1Q16878 200 aa11.98□□□□□ -0.49
PCDHGB4-201ENST00000519479 HP1BP3Q5SSJ5 553 aaPredicted RBP11.98□□□□□ -0.49
PCDHGB4-201ENST00000519479 C4orf19Q8IY42 314 aa11.98□□□□□ -0.49
PCDHGB4-201ENST00000519479 TAS1R2Q8TE23 839 aa11.98□□□□□ -0.49
PCDHGB4-201ENST00000519479 HSPH1Q92598 858 aa11.98□□□□□ -0.49
PCDHGB4-201ENST00000519479 FAM149B1Q96BN6 582 aa11.98□□□□□ -0.49
PCDHGB4-201ENST00000519479 ZSWIM1Q9BR11 485 aa11.98□□□□□ -0.49
PCDHGB4-201ENST00000519479 C17orf75Q9HAS0 396 aa11.98□□□□□ -0.49
PCDHGB4-201ENST00000519479 PARVAQ9NVD7 372 aa11.98□□□□□ -0.49
PCDHGB4-201ENST00000519479 COX16Q9P0S2 106 aa11.98□□□□□ -0.49
PCDHGB4-201ENST00000519479 NUP188Q5SRE5 1749 aa11.98□□□□□ -0.49
PCDHGB4-201ENST00000519479 IGKV6D-41A0A0C4DH26 115 aa11.98□□□□□ -0.49
PCDHGB4-201ENST00000519479 PRPSAP2O60256 369 aa11.98□□□□□ -0.49
PCDHGB4-201ENST00000519479 CA4P22748 312 aa11.98□□□□□ -0.49
PCDHGB4-201ENST00000519479 EFNA5P52803 228 aa11.98□□□□□ -0.49
PCDHGB4-201ENST00000519479 SOX10P56693 466 aa11.98□□□□□ -0.49
PCDHGB4-201ENST00000519479 LRRC31Q6UY01 552 aa11.98□□□□□ -0.49
PCDHGB4-201ENST00000519479 TRIM50Q86XT4 487 aa11.98□□□□□ -0.49
PCDHGB4-201ENST00000519479 RBBP8NLQ8NC74 664 aaPredicted RBP11.98□□□□□ -0.49
Retrieved 100 of 20,778 RNA–protein pairs in 37.6 ms