RNA–Protein interactions for RNA: ENST00000508071.1

CLDND1-217, Transcript of claudin domain containing 1, humanhuman

TSL 4

Gene CLDND1, Length 556 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLDND1-217ENST00000508071 FBXO4Q9UKT5 387 aa19.9■□□□□ 0.78
CLDND1-217ENST00000508071 PATJQ8NI35 1801 aa19.9■□□□□ 0.78
CLDND1-217ENST00000508071 FAM205CA6NFA0 338 aa19.89■□□□□ 0.77
CLDND1-217ENST00000508071 USO1O60763 962 aaKnown RBP19.89■□□□□ 0.77
CLDND1-217ENST00000508071 THP07101 528 aa19.89■□□□□ 0.77
CLDND1-217ENST00000508071 PPP4R3CPQ6ZMV5 832 aa19.89■□□□□ 0.77
CLDND1-217ENST00000508071 ZBTB8OSQ8IWT0 167 aa19.89■□□□□ 0.77
CLDND1-217ENST00000508071 ITFG1Q8TB96 612 aa19.89■□□□□ 0.77
CLDND1-217ENST00000508071 SLC7A14Q8TBB6 771 aa19.89■□□□□ 0.77
CLDND1-217ENST00000508071 PIGOQ8TEQ8 1089 aa19.89■□□□□ 0.77
CLDND1-217ENST00000508071 OSBPL6Q9BZF3 934 aa19.89■□□□□ 0.77
CLDND1-217ENST00000508071 BRMS1Q9HCU9 246 aa19.89■□□□□ 0.77
CLDND1-217ENST00000508071 DLL3Q9NYJ7 618 aa19.89■□□□□ 0.77
CLDND1-217ENST00000508071 VWA8A3KMH1 1905 aa19.88■□□□□ 0.77
CLDND1-217ENST00000508071 FAM170BA6NMN3 283 aa19.88■□□□□ 0.77
CLDND1-217ENST00000508071 N4BP3O15049 544 aa19.88■□□□□ 0.77
CLDND1-217ENST00000508071 SPTLC1O15269 473 aa19.88■□□□□ 0.77
CLDND1-217ENST00000508071 POU2F2P09086 479 aa19.88■□□□□ 0.77
CLDND1-217ENST00000508071 KRT2P35908 639 aa19.88■□□□□ 0.77
CLDND1-217ENST00000508071 MAGEA9P43362 315 aa19.88■□□□□ 0.77
CLDND1-217ENST00000508071 CSTF1Q05048 431 aaKnown RBP19.88■□□□□ 0.77
CLDND1-217ENST00000508071 NR5A1Q13285 461 aa19.88■□□□□ 0.77
CLDND1-217ENST00000508071 AXDND1Q5T1B0 1012 aaPredicted RBP19.88■□□□□ 0.77
CLDND1-217ENST00000508071 RSPO2Q6UXX9 243 aaPredicted RBP19.88■□□□□ 0.77
CLDND1-217ENST00000508071 MAEAQ7L5Y9 396 aa19.88■□□□□ 0.77
CLDND1-217ENST00000508071 WASF1Q92558 559 aa19.88■□□□□ 0.77
CLDND1-217ENST00000508071 TTC12Q9H892 705 aaPredicted RBP19.88■□□□□ 0.77
CLDND1-217ENST00000508071 SNTG2Q9NY99 539 aa19.88■□□□□ 0.77
CLDND1-217ENST00000508071 NCDNQ9UBB6 729 aa19.88■□□□□ 0.77
CLDND1-217ENST00000508071 MTF2Q9Y483 593 aaPredicted RBP19.88■□□□□ 0.77
CLDND1-217ENST00000508071 COL4A3Q01955 1670 aa19.87■□□□□ 0.77
CLDND1-217ENST00000508071 A0A087WWV3 80 aa19.87■□□□□ 0.77
CLDND1-217ENST00000508071 PTGESO14684 152 aa19.87■□□□□ 0.77
CLDND1-217ENST00000508071 ADAM12O43184 909 aa19.87■□□□□ 0.77
CLDND1-217ENST00000508071 XRCC6P12956 609 aaKnown RBP eCLIP19.87■□□□□ 0.77
CLDND1-217ENST00000508071 TXKP42681 527 aa19.87■□□□□ 0.77
CLDND1-217ENST00000508071 RSPO4Q2I0M5 234 aaPredicted RBP19.87■□□□□ 0.77
CLDND1-217ENST00000508071 UVSSAQ2YD98 709 aa19.87■□□□□ 0.77
CLDND1-217ENST00000508071 PABPC1LQ4VXU2 614 aaKnown RBP19.87■□□□□ 0.77
CLDND1-217ENST00000508071 VARS2Q5ST30 1063 aaKnown RBP19.87■□□□□ 0.77
CLDND1-217ENST00000508071 PDZRN4Q6ZMN7 1036 aaPredicted RBP19.87■□□□□ 0.77
CLDND1-217ENST00000508071 MCPH1Q8NEM0 835 aa19.87■□□□□ 0.77
CLDND1-217ENST00000508071 ATRIPQ8WXE1 791 aa19.87■□□□□ 0.77
CLDND1-217ENST00000508071 KXD1Q9BQD3 176 aa19.87■□□□□ 0.77
CLDND1-217ENST00000508071 C2orf40Q9H1Z8 148 aa19.87■□□□□ 0.77
CLDND1-217ENST00000508071 FZD8Q9H461 694 aa19.87■□□□□ 0.77
CLDND1-217ENST00000508071 PDZD7Q9H5P4 517 aa19.87■□□□□ 0.77
CLDND1-217ENST00000508071 LTB4R2Q9NPC1 389 aa19.87■□□□□ 0.77
CLDND1-217ENST00000508071 GPRC5CQ9NQ84 441 aa19.87■□□□□ 0.77
CLDND1-217ENST00000508071 ORC3Q9UBD5 711 aaPredicted RBP19.87■□□□□ 0.77
CLDND1-217ENST00000508071 KCNH3Q9ULD8 1083 aa19.87■□□□□ 0.77
CLDND1-217ENST00000508071 NOTCH4Q99466 2003 aa19.86■□□□□ 0.77
CLDND1-217ENST00000508071 CACNA1BQ00975 2339 aa19.86■□□□□ 0.77
CLDND1-217ENST00000508071 PFKFB2O60825 505 aa19.86■□□□□ 0.77
CLDND1-217ENST00000508071 DTNBO60941 627 aa19.86■□□□□ 0.77
CLDND1-217ENST00000508071 RECQL4O94761 1208 aa19.86■□□□□ 0.77
CLDND1-217ENST00000508071 RAB33AQ14088 237 aa19.86■□□□□ 0.77
CLDND1-217ENST00000508071 FAM187BQ17R55 369 aa19.86■□□□□ 0.77
CLDND1-217ENST00000508071 ZBTB41Q5SVQ8 909 aa19.86■□□□□ 0.77
CLDND1-217ENST00000508071 CDCA2Q69YH5 1023 aaPredicted RBP19.86■□□□□ 0.77
CLDND1-217ENST00000508071 ADPGKQ9BRR6 497 aa19.86■□□□□ 0.77
CLDND1-217ENST00000508071 HCFC1R1Q9NWW0 138 aa19.86■□□□□ 0.77
CLDND1-217ENST00000508071 PCDHGA2Q9Y5H1 932 aa19.86■□□□□ 0.77
CLDND1-217ENST00000508071 SPTBN2O15020 2390 aa19.86■□□□□ 0.77
CLDND1-217ENST00000508071 TPRP12270 2363 aaKnown RBP19.86■□□□□ 0.77
CLDND1-217ENST00000508071 EPG5Q9HCE0 2579 aa19.85■□□□□ 0.77
CLDND1-217ENST00000508071 NEMFO60524 1076 aa19.85■□□□□ 0.77
CLDND1-217ENST00000508071 ATP2B1P20020 1258 aa19.85■□□□□ 0.77
CLDND1-217ENST00000508071 CD72P21854 359 aa19.85■□□□□ 0.77
CLDND1-217ENST00000508071 OR1D2P34982 312 aa19.85■□□□□ 0.77
CLDND1-217ENST00000508071 PRPF4BQ13523 1007 aaKnown RBP19.85■□□□□ 0.77
CLDND1-217ENST00000508071 RTL10Q7L3V2 364 aa19.85■□□□□ 0.77
CLDND1-217ENST00000508071 NPAS3Q8IXF0 933 aa19.85■□□□□ 0.77
CLDND1-217ENST00000508071 GPR161Q8N6U8 529 aaKnown RBP19.85■□□□□ 0.77
CLDND1-217ENST00000508071 ING5Q8WYH8 240 aa19.85■□□□□ 0.77
CLDND1-217ENST00000508071 TNFRSF25Q93038 417 aa19.85■□□□□ 0.77
CLDND1-217ENST00000508071 SECISBP2LQ93073 1101 aaKnown RBP19.85■□□□□ 0.77
CLDND1-217ENST00000508071 DNMT3BQ9UBC3 853 aaKnown RBP19.85■□□□□ 0.77
CLDND1-217ENST00000508071 MRPS23Q9Y3D9 190 aaKnown RBP19.85■□□□□ 0.77
CLDND1-217ENST00000508071 TTLL13PA6NNM8 815 aa19.84■□□□□ 0.77
CLDND1-217ENST00000508071 NCAM2O15394 837 aa19.84■□□□□ 0.77
CLDND1-217ENST00000508071 PRKCBP05771 671 aa19.84■□□□□ 0.77
CLDND1-217ENST00000508071 FGFR3P22607 806 aa19.84■□□□□ 0.77
CLDND1-217ENST00000508071 NAB2Q15742 525 aa19.84■□□□□ 0.77
CLDND1-217ENST00000508071 MAPK6Q16659 721 aa19.84■□□□□ 0.77
CLDND1-217ENST00000508071 TPRG1Q6ZUI0 275 aa19.84■□□□□ 0.77
CLDND1-217ENST00000508071 NOSTRINQ8IVI9 506 aa19.84■□□□□ 0.77
CLDND1-217ENST00000508071 NELL2Q99435 816 aa19.84■□□□□ 0.77
CLDND1-217ENST00000508071 CXCL16Q9H2A7 254 aa19.84■□□□□ 0.77
CLDND1-217ENST00000508071 ZSCAN32Q9NX65 697 aa19.84■□□□□ 0.77
CLDND1-217ENST00000508071 MTRRQ9UBK8 725 aa19.84■□□□□ 0.77
CLDND1-217ENST00000508071 TPCN1Q9ULQ1 816 aa19.84■□□□□ 0.77
CLDND1-217ENST00000508071 ECI2O75521 394 aa19.83■□□□□ 0.77
CLDND1-217ENST00000508071 CTDNEP1O95476 244 aa19.83■□□□□ 0.77
CLDND1-217ENST00000508071 LIG1P18858 919 aa19.83■□□□□ 0.77
CLDND1-217ENST00000508071 SDHBP21912 280 aa19.83■□□□□ 0.77
CLDND1-217ENST00000508071 GDE1Q9NZC3 331 aa19.83■□□□□ 0.77
CLDND1-217ENST00000508071 MRPS17Q9Y2R5 130 aaKnown RBP19.83■□□□□ 0.77
CLDND1-217ENST00000508071 GDAQ9Y2T3 454 aa19.83■□□□□ 0.77
CLDND1-217ENST00000508071 CDY1Q9Y6F8 540 aa19.83■□□□□ 0.77
Retrieved 100 of 20,778 RNA–protein pairs in 125.3 ms