RNA–Protein interactions for RNA: ENST00000505659.1

HMGB1P29-201, Transcript of high mobility group box 1 pseudogene 29, humanhuman

BASIC

Gene HMGB1P29, Length 499 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB1P29-201ENST00000505659 AMY1AP04745 511 aa4.66□□□□□ -1.66
HMGB1P29-201ENST00000505659 ITGB1P05556 798 aa4.66□□□□□ -1.66
HMGB1P29-201ENST00000505659 CDK11BP21127 795 aaKnown RBP4.66□□□□□ -1.66
HMGB1P29-201ENST00000505659 CLRN1P58418 232 aa4.66□□□□□ -1.66
HMGB1P29-201ENST00000505659 MTMR1Q13613 665 aa4.66□□□□□ -1.66
HMGB1P29-201ENST00000505659 TIGD2Q4W5G0 525 aa4.66□□□□□ -1.66
HMGB1P29-201ENST00000505659 CRB2Q5IJ48 1285 aa4.66□□□□□ -1.66
HMGB1P29-201ENST00000505659 RNF187Q5TA31 235 aaPredicted RBP4.66□□□□□ -1.66
HMGB1P29-201ENST00000505659 PGM2L1Q6PCE3 622 aa4.66□□□□□ -1.66
HMGB1P29-201ENST00000505659 KCNV1Q6PIU1 500 aa4.66□□□□□ -1.66
HMGB1P29-201ENST00000505659 NECAB2Q7Z6G3 386 aa4.66□□□□□ -1.66
HMGB1P29-201ENST00000505659 AMOTL1Q8IY63 956 aa4.66□□□□□ -1.66
HMGB1P29-201ENST00000505659 SYNE4Q8N205 404 aa4.66□□□□□ -1.66
HMGB1P29-201ENST00000505659 C1orf162Q8NEQ5 155 aaPredicted RBP4.66□□□□□ -1.66
HMGB1P29-201ENST00000505659 CCHCR1Q8TD31 782 aa4.66□□□□□ -1.66
HMGB1P29-201ENST00000505659 NRG4Q8WWG1 115 aa4.66□□□□□ -1.66
HMGB1P29-201ENST00000505659 JADE3Q92613 823 aa4.66□□□□□ -1.66
HMGB1P29-201ENST00000505659 PUS7LQ9H0K6 701 aaKnown RBP4.66□□□□□ -1.66
HMGB1P29-201ENST00000505659 LANCL2Q9NS86 450 aa4.66□□□□□ -1.66
HMGB1P29-201ENST00000505659 SLC23A1Q9UHI7 598 aa4.66□□□□□ -1.66
HMGB1P29-201ENST00000505659 TRHDEQ9UKU6 1024 aa4.66□□□□□ -1.66
HMGB1P29-201ENST00000505659 CLCA2Q9UQC9 943 aa4.66□□□□□ -1.66
HMGB1P29-201ENST00000505659 A0A087X1B8 175 aa4.65□□□□□ -1.67
HMGB1P29-201ENST00000505659 CCDC78A2IDD5 438 aa4.65□□□□□ -1.67
HMGB1P29-201ENST00000505659 UNC119BA6NIH7 251 aa4.65□□□□□ -1.67
HMGB1P29-201ENST00000505659 TRIM75PA6NK02 468 aa4.65□□□□□ -1.67
HMGB1P29-201ENST00000505659 PJA2O43164 708 aa4.65□□□□□ -1.67
HMGB1P29-201ENST00000505659 PCDHGA12O60330 932 aa4.65□□□□□ -1.67
HMGB1P29-201ENST00000505659 PRSS23O95084 383 aa4.65□□□□□ -1.67
HMGB1P29-201ENST00000505659 SNRPA1P09661 255 aaKnown RBP4.65□□□□□ -1.67
HMGB1P29-201ENST00000505659 MYBL2P10244 700 aa4.65□□□□□ -1.67
HMGB1P29-201ENST00000505659 RBP3P10745 1247 aa4.65□□□□□ -1.67
HMGB1P29-201ENST00000505659 LAG3P18627 525 aa4.65□□□□□ -1.67
HMGB1P29-201ENST00000505659 C5AR1P21730 350 aa4.65□□□□□ -1.67
HMGB1P29-201ENST00000505659 SLC6A2P23975 617 aa4.65□□□□□ -1.67
HMGB1P29-201ENST00000505659 GUCY2FP51841 1108 aa4.65□□□□□ -1.67
HMGB1P29-201ENST00000505659 INHBCP55103 352 aa4.65□□□□□ -1.67
HMGB1P29-201ENST00000505659 SP140Q13342 867 aa4.65□□□□□ -1.67
HMGB1P29-201ENST00000505659 BEAN1Q3B7T3 259 aa4.65□□□□□ -1.67
HMGB1P29-201ENST00000505659 MED25Q71SY5 747 aa4.65□□□□□ -1.67
HMGB1P29-201ENST00000505659 ULK2Q8IYT8 1036 aa4.65□□□□□ -1.67
HMGB1P29-201ENST00000505659 PRPF38AQ8NAV1 312 aaKnown RBP4.65□□□□□ -1.67
HMGB1P29-201ENST00000505659 DDX55Q8NHQ9 600 aaKnown RBP eCLIP4.65□□□□□ -1.67
HMGB1P29-201ENST00000505659 ZFP28Q8NHY6 868 aa4.65□□□□□ -1.67
HMGB1P29-201ENST00000505659 MTMR8Q96EF0 704 aa4.65□□□□□ -1.67
HMGB1P29-201ENST00000505659 DCLRE1CQ96SD1 692 aaKnown RBP4.65□□□□□ -1.67
HMGB1P29-201ENST00000505659 CEP89Q96ST8 783 aa4.65□□□□□ -1.67
HMGB1P29-201ENST00000505659 AGAP2Q99490 1192 aa4.65□□□□□ -1.67
HMGB1P29-201ENST00000505659 ADAM2Q99965 735 aa4.65□□□□□ -1.67
HMGB1P29-201ENST00000505659 ZSWIM1Q9BR11 485 aa4.65□□□□□ -1.67
HMGB1P29-201ENST00000505659 MENTQ9BUN1 341 aa4.65□□□□□ -1.67
HMGB1P29-201ENST00000505659 FBXO34Q9NWN3 711 aa4.65□□□□□ -1.67
HMGB1P29-201ENST00000505659 INTUQ9ULD6 942 aa4.65□□□□□ -1.67
HMGB1P29-201ENST00000505659 PCDHGA9Q9Y5G4 932 aaKnown RBP4.65□□□□□ -1.67
HMGB1P29-201ENST00000505659 PCDHGA8Q9Y5G5 932 aa4.65□□□□□ -1.67
HMGB1P29-201ENST00000505659 PCDHGA7Q9Y5G6 932 aa4.65□□□□□ -1.67
HMGB1P29-201ENST00000505659 PCDHGA6Q9Y5G7 932 aa4.65□□□□□ -1.67
HMGB1P29-201ENST00000505659 PCDHGA3Q9Y5H0 932 aa4.65□□□□□ -1.67
HMGB1P29-201ENST00000505659 GRID2IPA4D2P6 1211 aa4.64□□□□□ -1.67
HMGB1P29-201ENST00000505659 FZD9O00144 591 aa4.64□□□□□ -1.67
HMGB1P29-201ENST00000505659 RNASET2O00584 256 aaKnown RBP4.64□□□□□ -1.67
HMGB1P29-201ENST00000505659 ENDOD1O94919 500 aa4.64□□□□□ -1.67
HMGB1P29-201ENST00000505659 ATP5JP18859 108 aa4.64□□□□□ -1.67
HMGB1P29-201ENST00000505659 MGAT1P26572 445 aa4.64□□□□□ -1.67
HMGB1P29-201ENST00000505659 ITKQ08881 620 aa4.64□□□□□ -1.67
HMGB1P29-201ENST00000505659 ACAP2Q15057 778 aa4.64□□□□□ -1.67
HMGB1P29-201ENST00000505659 PCBP2Q15366 365 aaKnown RBP eCLIP4.64□□□□□ -1.67
HMGB1P29-201ENST00000505659 RRP12Q5JTH9 1297 aaKnown RBP4.64□□□□□ -1.67
HMGB1P29-201ENST00000505659 LY6G5CQ5SRR4 150 aa4.64□□□□□ -1.67
HMGB1P29-201ENST00000505659 SYDE2Q5VT97 1194 aa4.64□□□□□ -1.67
HMGB1P29-201ENST00000505659 LAIR1Q6GTX8 287 aa4.64□□□□□ -1.67
HMGB1P29-201ENST00000505659 ZNF529Q6P280 563 aa4.64□□□□□ -1.67
HMGB1P29-201ENST00000505659 UBE3BQ7Z3V4 1068 aa4.64□□□□□ -1.67
HMGB1P29-201ENST00000505659 MRGPRGQ86SM5 289 aa4.64□□□□□ -1.67
HMGB1P29-201ENST00000505659 PLXDC1Q8IUK5 500 aa4.64□□□□□ -1.67
HMGB1P29-201ENST00000505659 CPEB3Q8NE35 698 aaKnown RBP4.64□□□□□ -1.67
HMGB1P29-201ENST00000505659 OR56A1Q8NGH5 318 aa4.64□□□□□ -1.67
HMGB1P29-201ENST00000505659 MYEOVQ96EZ4 313 aa4.64□□□□□ -1.67
HMGB1P29-201ENST00000505659 SLITRK6Q9H5Y7 841 aa4.64□□□□□ -1.67
HMGB1P29-201ENST00000505659 MKS1Q9NXB0 559 aa4.64□□□□□ -1.67
HMGB1P29-201ENST00000505659 DMRT1Q9Y5R6 373 aa4.64□□□□□ -1.67
HMGB1P29-201ENST00000505659 TMEM200CA6NKL6 621 aa4.63□□□□□ -1.67
HMGB1P29-201ENST00000505659 MARCH11A6NNE9 402 aa4.63□□□□□ -1.67
HMGB1P29-201ENST00000505659 GABRDO14764 452 aa4.63□□□□□ -1.67
HMGB1P29-201ENST00000505659 FOXN1O15353 648 aa4.63□□□□□ -1.67
HMGB1P29-201ENST00000505659 XPOTO43592 962 aaKnown RBP4.63□□□□□ -1.67
HMGB1P29-201ENST00000505659 RAMP2O60895 175 aa4.63□□□□□ -1.67
HMGB1P29-201ENST00000505659 NDUFS2O75306 463 aa4.63□□□□□ -1.67
HMGB1P29-201ENST00000505659 GPR32O75388 356 aa4.63□□□□□ -1.67
HMGB1P29-201ENST00000505659 ELANEP08246 267 aa4.63□□□□□ -1.67
HMGB1P29-201ENST00000505659 IL2RBP14784 551 aa4.63□□□□□ -1.67
HMGB1P29-201ENST00000505659 MTM1Q13496 603 aa4.63□□□□□ -1.67
HMGB1P29-201ENST00000505659 AGAP9Q5VTM2 703 aa4.63□□□□□ -1.67
HMGB1P29-201ENST00000505659 TSHZ3Q63HK5 1081 aa4.63□□□□□ -1.67
HMGB1P29-201ENST00000505659 FAM180AQ6UWF9 173 aa4.63□□□□□ -1.67
HMGB1P29-201ENST00000505659 RHOT1Q8IXI2 618 aa4.63□□□□□ -1.67
HMGB1P29-201ENST00000505659 BEND2Q8NDZ0 799 aa4.63□□□□□ -1.67
HMGB1P29-201ENST00000505659 FAXDC2Q96IV6 333 aa4.63□□□□□ -1.67
HMGB1P29-201ENST00000505659 WDR11Q9BZH6 1224 aa4.63□□□□□ -1.67
HMGB1P29-201ENST00000505659 TMX1Q9H3N1 280 aa4.63□□□□□ -1.67
Retrieved 100 of 20,778 RNA–protein pairs in 54.2 ms