RNA–Protein interactions for RNA: ENST00000495955.5

GAPVD1-219, Transcript of GTPase activating protein and VPS9 domains 1, humanhuman

TSL 1 (best) BASIC

Gene GAPVD1, Length 5,309 nt, Biotype protein coding, Subcellular localisation Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GAPVD1-219ENST00000495955 SYCE1Q8N0S2 351 aa10.14□□□□□ -0.79
GAPVD1-219ENST00000495955 BCAS3Q9H6U6 928 aa10.14□□□□□ -0.79
GAPVD1-219ENST00000495955 COL4A5P29400 1685 aa10.14□□□□□ -0.79
GAPVD1-219ENST00000495955 PRRG1O14668 218 aa10.14□□□□□ -0.79
GAPVD1-219ENST00000495955 LYPLA2O95372 231 aa10.14□□□□□ -0.79
GAPVD1-219ENST00000495955 SERPING1P05155 500 aa10.14□□□□□ -0.79
GAPVD1-219ENST00000495955 AMHR2Q16671 573 aa10.14□□□□□ -0.79
GAPVD1-219ENST00000495955 DNAJC24Q6P3W2 148 aa10.14□□□□□ -0.79
GAPVD1-219ENST00000495955 LRRC8DQ7L1W4 858 aa10.14□□□□□ -0.79
GAPVD1-219ENST00000495955 PEX26Q7Z412 305 aa10.14□□□□□ -0.79
GAPVD1-219ENST00000495955 TRIM11Q96F44 468 aa10.14□□□□□ -0.79
GAPVD1-219ENST00000495955 POP1Q99575 1024 aaKnown RBP10.14□□□□□ -0.79
GAPVD1-219ENST00000495955 ZMYND8Q9ULU4 1186 aaPredicted RBP10.14□□□□□ -0.79
GAPVD1-219ENST00000495955 CD44P16070 742 aaKnown RBP10.14□□□□□ -0.79
GAPVD1-219ENST00000495955 TEX35Q5T0J7 233 aa10.14□□□□□ -0.79
GAPVD1-219ENST00000495955 ENOSF1Q7L5Y1 443 aa10.14□□□□□ -0.79
GAPVD1-219ENST00000495955 FTHL17Q9BXU8 183 aa10.14□□□□□ -0.79
GAPVD1-219ENST00000495955 ODC1P11926 461 aa10.13□□□□□ -0.79
GAPVD1-219ENST00000495955 SGO2Q562F6 1265 aa10.13□□□□□ -0.79
GAPVD1-219ENST00000495955 ZPBP2Q6X784 338 aa10.13□□□□□ -0.79
GAPVD1-219ENST00000495955 KIAA0895Q8NCT3 520 aa10.13□□□□□ -0.79
GAPVD1-219ENST00000495955 UBXN4Q92575 508 aa10.13□□□□□ -0.79
GAPVD1-219ENST00000495955 CCDC114Q96M63 670 aa10.13□□□□□ -0.79
GAPVD1-219ENST00000495955 SEPT5Q99719 369 aaPredicted RBP10.13□□□□□ -0.79
GAPVD1-219ENST00000495955 SEMA6BQ9H3T3 888 aa10.13□□□□□ -0.79
GAPVD1-219ENST00000495955 TMEM134Q9H6X4 195 aa10.13□□□□□ -0.79
GAPVD1-219ENST00000495955 TEX33O43247 280 aa10.13□□□□□ -0.79
GAPVD1-219ENST00000495955 NOP14P78316 857 aaKnown RBP10.13□□□□□ -0.79
GAPVD1-219ENST00000495955 HOOK3Q86VS8 718 aa10.13□□□□□ -0.79
GAPVD1-219ENST00000495955 ZNF507Q8TCN5 953 aa10.13□□□□□ -0.79
GAPVD1-219ENST00000495955 NIFKQ9BYG3 293 aaKnown RBP10.13□□□□□ -0.79
GAPVD1-219ENST00000495955 RNF19AQ9NV58 838 aa10.13□□□□□ -0.79
GAPVD1-219ENST00000495955 PCDHA2Q9Y5H9 948 aa10.13□□□□□ -0.79
GAPVD1-219ENST00000495955 ARAP2Q8WZ64 1704 aa10.13□□□□□ -0.79
GAPVD1-219ENST00000495955 LRRC53A6NM62 1247 aa10.13□□□□□ -0.79
GAPVD1-219ENST00000495955 ARVCFO00192 962 aa10.13□□□□□ -0.79
GAPVD1-219ENST00000495955 WEE2P0C1S8 567 aa10.13□□□□□ -0.79
GAPVD1-219ENST00000495955 EIF4A3P38919 411 aaKnown RBP10.13□□□□□ -0.79
GAPVD1-219ENST00000495955 CKAP4Q07065 602 aaKnown RBP10.13□□□□□ -0.79
GAPVD1-219ENST00000495955 ACBD3Q9H3P7 528 aa10.13□□□□□ -0.79
GAPVD1-219ENST00000495955 PCDHB2Q9Y5E7 798 aa10.13□□□□□ -0.79
GAPVD1-219ENST00000495955 EPN1Q9Y6I3 576 aaPredicted RBP10.13□□□□□ -0.79
GAPVD1-219ENST00000495955 A0A1W2PQ45 241 aaPredicted RBP10.13□□□□□ -0.79
GAPVD1-219ENST00000495955 A0A1W2PQY0 241 aa10.13□□□□□ -0.79
GAPVD1-219ENST00000495955 DNAJB2P25686 324 aa10.13□□□□□ -0.79
GAPVD1-219ENST00000495955 PPM1FP49593 454 aaPredicted RBP10.13□□□□□ -0.79
GAPVD1-219ENST00000495955 TLE2Q04725 743 aa10.13□□□□□ -0.79
GAPVD1-219ENST00000495955 PPP1R2P3Q6NXS1 205 aa10.13□□□□□ -0.79
GAPVD1-219ENST00000495955 MAP4K3Q8IVH8 894 aa10.13□□□□□ -0.79
GAPVD1-219ENST00000495955 TMEM35BQ8NCS4 154 aa10.13□□□□□ -0.79
GAPVD1-219ENST00000495955 MRPL9Q9BYD2 267 aaKnown RBP10.13□□□□□ -0.79
GAPVD1-219ENST00000495955 SLC12A6Q9UHW9 1150 aa10.13□□□□□ -0.79
GAPVD1-219ENST00000495955 HES2Q9Y543 173 aa10.13□□□□□ -0.79
GAPVD1-219ENST00000495955 PASKQ96RG2 1323 aa10.12□□□□□ -0.79
GAPVD1-219ENST00000495955 ANKRD63C9JTQ0 380 aa10.12□□□□□ -0.79
GAPVD1-219ENST00000495955 MYO1FO00160 1098 aa10.12□□□□□ -0.79
GAPVD1-219ENST00000495955 CDC25BP30305 580 aa10.12□□□□□ -0.79
GAPVD1-219ENST00000495955 RTP1P59025 263 aa10.12□□□□□ -0.79
GAPVD1-219ENST00000495955 PTENP60484 403 aa10.12□□□□□ -0.79
GAPVD1-219ENST00000495955 CYP24A1Q07973 514 aa10.12□□□□□ -0.79
GAPVD1-219ENST00000495955 HLTFQ14527 1009 aaKnown RBP eCLIP10.12□□□□□ -0.79
GAPVD1-219ENST00000495955 MAMDC4Q6UXC1 1216 aa10.12□□□□□ -0.79
GAPVD1-219ENST00000495955 AFAP1L1Q8TED9 768 aa10.12□□□□□ -0.79
GAPVD1-219ENST00000495955 TYW5A2RUC4 315 aaKnown RBP10.12□□□□□ -0.79
GAPVD1-219ENST00000495955 M0R2N6 131 aa10.12□□□□□ -0.79
GAPVD1-219ENST00000495955 GNL1P36915 607 aaPredicted RBP10.12□□□□□ -0.79
GAPVD1-219ENST00000495955 BCAR1P56945 870 aa10.12□□□□□ -0.79
GAPVD1-219ENST00000495955 GJA9P57773 515 aa10.12□□□□□ -0.79
GAPVD1-219ENST00000495955 MGAT5BQ3V5L5 792 aa10.12□□□□□ -0.79
GAPVD1-219ENST00000495955 TAPT1Q6NXT6 567 aa10.12□□□□□ -0.79
GAPVD1-219ENST00000495955 SYT10Q6XYQ8 523 aa10.12□□□□□ -0.79
GAPVD1-219ENST00000495955 DCP1BQ8IZD4 617 aaKnown RBP10.12□□□□□ -0.79
GAPVD1-219ENST00000495955 GAD1Q99259 594 aa10.12□□□□□ -0.79
GAPVD1-219ENST00000495955 PSMB7Q99436 277 aa10.12□□□□□ -0.79
GAPVD1-219ENST00000495955 CGRRF1Q99675 332 aa10.12□□□□□ -0.79
GAPVD1-219ENST00000495955 NHEJ1Q9H9Q4 299 aaPredicted RBP10.12□□□□□ -0.79
GAPVD1-219ENST00000495955 MSRAQ9UJ68 235 aa10.12□□□□□ -0.79
GAPVD1-219ENST00000495955 TISP43B9A030 160 aa10.12□□□□□ -0.79
GAPVD1-219ENST00000495955 DPYSL4O14531 572 aa10.12□□□□□ -0.79
GAPVD1-219ENST00000495955 B4GALT5O43286 388 aa10.12□□□□□ -0.79
GAPVD1-219ENST00000495955 ZNF862O60290 1169 aa10.12□□□□□ -0.79
GAPVD1-219ENST00000495955 URODP06132 367 aa10.12□□□□□ -0.79
GAPVD1-219ENST00000495955 MLH1P40692 756 aa10.12□□□□□ -0.79
GAPVD1-219ENST00000495955 PURAQ00577 322 aaKnown RBP10.12□□□□□ -0.79
GAPVD1-219ENST00000495955 PTK7Q13308 1070 aa10.12□□□□□ -0.79
GAPVD1-219ENST00000495955 SNX17Q15036 470 aa10.12□□□□□ -0.79
GAPVD1-219ENST00000495955 OTOP2Q7RTS6 562 aa10.12□□□□□ -0.79
GAPVD1-219ENST00000495955 NSMCE1Q8WV22 266 aa10.12□□□□□ -0.79
GAPVD1-219ENST00000495955 LPPQ93052 612 aa10.12□□□□□ -0.79
GAPVD1-219ENST00000495955 APEX2Q9UBZ4 518 aa10.12□□□□□ -0.79
GAPVD1-219ENST00000495955 A6NJR5 290 aa10.12□□□□□ -0.79
GAPVD1-219ENST00000495955 RECQL4O94761 1208 aa10.12□□□□□ -0.79
GAPVD1-219ENST00000495955 PCSK1P29120 753 aa10.12□□□□□ -0.79
GAPVD1-219ENST00000495955 MESDQ14696 234 aa10.12□□□□□ -0.79
GAPVD1-219ENST00000495955 MTFR1Q15390 333 aa10.12□□□□□ -0.79
GAPVD1-219ENST00000495955 TMC7Q7Z402 723 aa10.12□□□□□ -0.79
GAPVD1-219ENST00000495955 USP38Q8NB14 1042 aa10.12□□□□□ -0.79
GAPVD1-219ENST00000495955 TMEM161BQ8NDZ6 487 aa10.12□□□□□ -0.79
GAPVD1-219ENST00000495955 GADD45GIP1Q8TAE8 222 aaPredicted RBP10.12□□□□□ -0.79
GAPVD1-219ENST00000495955 LENG9Q96B70 501 aa10.12□□□□□ -0.79
Retrieved 100 of 20,778 RNA–protein pairs in 44.6 ms