RNA–Protein interactions for RNA: ENST00000494646.1

MSH5-218, Transcript of mutS homolog 5, humanhuman

TSL 4

Gene MSH5, Length 528 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MSH5-218ENST00000494646 MAPK7Q13164 816 aa10.54□□□□□ -0.72
MSH5-218ENST00000494646 DMP1Q13316 513 aaPredicted RBP10.54□□□□□ -0.72
MSH5-218ENST00000494646 SEZ6Q53EL9 994 aa10.54□□□□□ -0.72
MSH5-218ENST00000494646 RTP2Q5QGT7 225 aa10.54□□□□□ -0.72
MSH5-218ENST00000494646 IER5LQ5T953 404 aa10.54□□□□□ -0.72
MSH5-218ENST00000494646 SYT2Q8N9I0 419 aaPredicted RBP10.54□□□□□ -0.72
MSH5-218ENST00000494646 TDRD5Q8NAT2 981 aaKnown RBP10.54□□□□□ -0.72
MSH5-218ENST00000494646 RNF25Q96BH1 459 aaPredicted RBP10.54□□□□□ -0.72
MSH5-218ENST00000494646 DRC1Q96MC2 740 aa10.54□□□□□ -0.72
MSH5-218ENST00000494646 GOLGA2P5Q9HBQ8 144 aa10.54□□□□□ -0.72
MSH5-218ENST00000494646 ZNF318Q5VUA4 2279 aa10.54□□□□□ -0.72
MSH5-218ENST00000494646 DENND4AQ7Z401 1863 aa10.53□□□□□ -0.72
MSH5-218ENST00000494646 VPS37CA5D8V6 355 aaPredicted RBP10.53□□□□□ -0.72
MSH5-218ENST00000494646 BRD1O95696 1058 aa10.53□□□□□ -0.72
MSH5-218ENST00000494646 PDGFBP01127 241 aaPredicted RBP10.53□□□□□ -0.72
MSH5-218ENST00000494646 UBA7P41226 1012 aa10.53□□□□□ -0.72
MSH5-218ENST00000494646 CLCNKBP51801 687 aa10.53□□□□□ -0.72
MSH5-218ENST00000494646 SLC12A3P55017 1021 aa10.53□□□□□ -0.72
MSH5-218ENST00000494646 SF3A1Q15459 793 aaKnown RBP10.53□□□□□ -0.72
MSH5-218ENST00000494646 ZNF568Q3ZCX4 644 aa10.53□□□□□ -0.72
MSH5-218ENST00000494646 ARSHQ5FYA8 562 aa10.53□□□□□ -0.72
MSH5-218ENST00000494646 HYIQ5T013 277 aa10.53□□□□□ -0.72
MSH5-218ENST00000494646 ARL6IP4Q66PJ3 421 aaKnown RBP10.53□□□□□ -0.72
MSH5-218ENST00000494646 LILRA6Q6PI73 481 aa10.53□□□□□ -0.72
MSH5-218ENST00000494646 BMP8AQ7Z5Y6 402 aa10.53□□□□□ -0.72
MSH5-218ENST00000494646 LNX1Q8TBB1 728 aaPredicted RBP10.53□□□□□ -0.72
MSH5-218ENST00000494646 LRRC15Q8TF66 581 aa10.53□□□□□ -0.72
MSH5-218ENST00000494646 ACSF2Q96CM8 615 aaPredicted RBP10.53□□□□□ -0.72
MSH5-218ENST00000494646 ASIC4Q96FT7 647 aa10.53□□□□□ -0.72
MSH5-218ENST00000494646 PPP1R10Q96QC0 940 aaKnown RBP10.53□□□□□ -0.72
MSH5-218ENST00000494646 CLSTN3Q9BQT9 956 aa10.53□□□□□ -0.72
MSH5-218ENST00000494646 NTPCRQ9BSD7 190 aaKnown RBP10.53□□□□□ -0.72
MSH5-218ENST00000494646 TTPALQ9BTX7 342 aa10.53□□□□□ -0.72
MSH5-218ENST00000494646 MRPL4Q9BYD3 311 aaKnown RBP10.53□□□□□ -0.72
MSH5-218ENST00000494646 NT5C3AQ9H0P0 336 aa10.53□□□□□ -0.72
MSH5-218ENST00000494646 CDT1Q9H211 546 aa10.53□□□□□ -0.72
MSH5-218ENST00000494646 PIDD1Q9HB75 910 aa10.53□□□□□ -0.72
MSH5-218ENST00000494646 PTPRHQ9HD43 1115 aa10.53□□□□□ -0.72
MSH5-218ENST00000494646 APOBEC3CQ9NRW3 190 aaKnown RBP eCLIP10.53□□□□□ -0.72
MSH5-218ENST00000494646 FNIP2Q9P278 1114 aa10.53□□□□□ -0.72
MSH5-218ENST00000494646 SORCS3Q9UPU3 1222 aa10.53□□□□□ -0.72
MSH5-218ENST00000494646 RBM19Q9Y4C8 960 aaKnown RBP10.53□□□□□ -0.72
MSH5-218ENST00000494646 ARIH1Q9Y4X5 557 aaPredicted RBP10.53□□□□□ -0.72
MSH5-218ENST00000494646 SF3B1O75533 1304 aaKnown RBP eCLIP10.53□□□□□ -0.72
MSH5-218ENST00000494646 PHLPP2Q6ZVD8 1323 aa10.53□□□□□ -0.72
MSH5-218ENST00000494646 SMIM28A0A1B0GU29 152 aa10.52□□□□□ -0.73
MSH5-218ENST00000494646 I3L4J1 428 aa10.52□□□□□ -0.73
MSH5-218ENST00000494646 ADAM12O43184 909 aa10.52□□□□□ -0.73
MSH5-218ENST00000494646 B3GAT3O94766 335 aa10.52□□□□□ -0.73
MSH5-218ENST00000494646 PLS3P13797 630 aa10.52□□□□□ -0.73
MSH5-218ENST00000494646 GUCY2CP25092 1073 aa10.52□□□□□ -0.73
MSH5-218ENST00000494646 GBP2P32456 591 aaPredicted RBP10.52□□□□□ -0.73
MSH5-218ENST00000494646 GRM5P41594 1212 aa10.52□□□□□ -0.73
MSH5-218ENST00000494646 MATR3P43243 847 aaKnown RBP eCLIP10.52□□□□□ -0.73
MSH5-218ENST00000494646 BRCC3P46736 316 aa10.52□□□□□ -0.73
MSH5-218ENST00000494646 SMTNP53814 917 aa10.52□□□□□ -0.73
MSH5-218ENST00000494646 YARSP54577 528 aaKnown RBP10.52□□□□□ -0.73
MSH5-218ENST00000494646 STRN3Q13033 797 aa10.52□□□□□ -0.73
MSH5-218ENST00000494646 CUL4AQ13619 759 aa10.52□□□□□ -0.73
MSH5-218ENST00000494646 PSMD5Q16401 504 aa10.52□□□□□ -0.73
MSH5-218ENST00000494646 SPECC1Q5M775 1068 aa10.52□□□□□ -0.73
MSH5-218ENST00000494646 FAM173BQ6P4H8 233 aa10.52□□□□□ -0.73
MSH5-218ENST00000494646 DCLRE1AQ6PJP8 1040 aa10.52□□□□□ -0.73
MSH5-218ENST00000494646 CD300LGQ6UXG3 332 aa10.52□□□□□ -0.73
MSH5-218ENST00000494646 ALKAL1Q6UXT8 129 aa10.52□□□□□ -0.73
MSH5-218ENST00000494646 C15orf39Q6ZRI6 1047 aa10.52□□□□□ -0.73
MSH5-218ENST00000494646 CCDC149Q6ZUS6 474 aa10.52□□□□□ -0.73
MSH5-218ENST00000494646 APBB1IPQ7Z5R6 666 aaPredicted RBP10.52□□□□□ -0.73
MSH5-218ENST00000494646 SUGP1Q8IWZ8 645 aaKnown RBP10.52□□□□□ -0.73
MSH5-218ENST00000494646 ZDHHC14Q8IZN3 488 aa10.52□□□□□ -0.73
MSH5-218ENST00000494646 FBXL6Q8N531 539 aa10.52□□□□□ -0.73
MSH5-218ENST00000494646 ST13P5Q8NFI4 369 aaPredicted RBP10.52□□□□□ -0.73
MSH5-218ENST00000494646 SMG7Q92540 1137 aaKnown RBP10.52□□□□□ -0.73
MSH5-218ENST00000494646 CALML4Q96GE6 196 aa10.52□□□□□ -0.73
MSH5-218ENST00000494646 ZMAT2Q96NC0 199 aaKnown RBP10.52□□□□□ -0.73
MSH5-218ENST00000494646 ACAP3Q96P50 834 aa10.52□□□□□ -0.73
MSH5-218ENST00000494646 CCDC94Q9BW85 323 aaPredicted RBP10.52□□□□□ -0.73
MSH5-218ENST00000494646 C17orf75Q9HAS0 396 aa10.52□□□□□ -0.73
MSH5-218ENST00000494646 ARHGAP28Q9P2N2 729 aa10.52□□□□□ -0.73
MSH5-218ENST00000494646 DPP7Q9UHL4 492 aa10.52□□□□□ -0.73
MSH5-218ENST00000494646 USTQ9Y2C2 406 aa10.52□□□□□ -0.73
MSH5-218ENST00000494646 SSUH2Q9Y2M2 353 aa10.52□□□□□ -0.73
MSH5-218ENST00000494646 DOCK8Q8NF50 2099 aa10.52□□□□□ -0.73
MSH5-218ENST00000494646 ZDBF2Q9HCK1 2354 aa10.52□□□□□ -0.73
MSH5-218ENST00000494646 ZMYM2Q9UBW7 1377 aa10.52□□□□□ -0.73
MSH5-218ENST00000494646 MYO15AQ9UKN7 3530 aa10.51□□□□□ -0.73
MSH5-218ENST00000494646 PDCD11Q14690 1871 aaKnown RBP10.51□□□□□ -0.73
MSH5-218ENST00000494646 N4BP1O75113 896 aaKnown RBP10.51□□□□□ -0.73
MSH5-218ENST00000494646 MCF2P10911 925 aa10.51□□□□□ -0.73
MSH5-218ENST00000494646 PROZP22891 400 aa10.51□□□□□ -0.73
MSH5-218ENST00000494646 OR1D2P34982 312 aa10.51□□□□□ -0.73
MSH5-218ENST00000494646 CEBPZQ03701 1054 aaKnown RBP10.51□□□□□ -0.73
MSH5-218ENST00000494646 SOX4Q06945 474 aaPredicted RBP10.51□□□□□ -0.73
MSH5-218ENST00000494646 SPAG1Q07617 926 aa10.51□□□□□ -0.73
MSH5-218ENST00000494646 MTMR3Q13615 1198 aa10.51□□□□□ -0.73
MSH5-218ENST00000494646 MCM6Q14566 821 aa10.51□□□□□ -0.73
MSH5-218ENST00000494646 KARSQ15046 597 aaKnown RBP10.51□□□□□ -0.73
MSH5-218ENST00000494646 UPP1Q16831 310 aa10.51□□□□□ -0.73
MSH5-218ENST00000494646 TMEM119Q4V9L6 283 aa10.51□□□□□ -0.73
MSH5-218ENST00000494646 MPZL3Q6UWV2 235 aa10.51□□□□□ -0.73
Retrieved 100 of 20,778 RNA–protein pairs in 33.4 ms