RNA–Protein interactions for RNA: ENST00000488249.1

RBM28-207, Transcript of RNA binding motif protein 28, humanhuman

TSL 3

Gene RBM28, Length 570 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RBM28-207ENST00000488249 ZNF341Q9BYN7 854 aa4.17□□□□□ -1.74
RBM28-207ENST00000488249 CSRNP2Q9H175 543 aa4.17□□□□□ -1.74
RBM28-207ENST00000488249 POGKQ9P215 609 aa4.17□□□□□ -1.74
RBM28-207ENST00000488249 BCCIPQ9P287 314 aaKnown RBP eCLIP4.17□□□□□ -1.74
RBM28-207ENST00000488249 LIMCH1Q9UPQ0 1083 aa4.17□□□□□ -1.74
RBM28-207ENST00000488249 SORCS3Q9UPU3 1222 aa4.17□□□□□ -1.74
RBM28-207ENST00000488249 IPPQ9Y573 584 aa4.17□□□□□ -1.74
RBM28-207ENST00000488249 LEFTY2O00292 366 aa4.16□□□□□ -1.74
RBM28-207ENST00000488249 TRIM24O15164 1050 aa4.16□□□□□ -1.74
RBM28-207ENST00000488249 TEX33O43247 280 aa4.16□□□□□ -1.74
RBM28-207ENST00000488249 FAM20BO75063 409 aa4.16□□□□□ -1.74
RBM28-207ENST00000488249 GPR32O75388 356 aa4.16□□□□□ -1.74
RBM28-207ENST00000488249 RECQL4O94761 1208 aa4.16□□□□□ -1.74
RBM28-207ENST00000488249 ZRANB2O95218 330 aaKnown RBP eCLIP4.16□□□□□ -1.74
RBM28-207ENST00000488249 PEX11BO96011 259 aa4.16□□□□□ -1.74
RBM28-207ENST00000488249 DDCP20711 480 aa4.16□□□□□ -1.74
RBM28-207ENST00000488249 PCSK1P29120 753 aa4.16□□□□□ -1.74
RBM28-207ENST00000488249 APOBEC3AP31941 199 aaPredicted RBP4.16□□□□□ -1.74
RBM28-207ENST00000488249 ALDH1A3P47895 512 aa4.16□□□□□ -1.74
RBM28-207ENST00000488249 SLC25A3Q00325 362 aa4.16□□□□□ -1.74
RBM28-207ENST00000488249 MTM1Q13496 603 aa4.16□□□□□ -1.74
RBM28-207ENST00000488249 UAP1L1Q3KQV9 507 aa4.16□□□□□ -1.74
RBM28-207ENST00000488249 LSM12Q3MHD2 195 aaKnown RBP4.16□□□□□ -1.74
RBM28-207ENST00000488249 TMEM240Q5SV17 173 aa4.16□□□□□ -1.74
RBM28-207ENST00000488249 ATXN7L2Q5T6C5 722 aaPredicted RBP4.16□□□□□ -1.74
RBM28-207ENST00000488249 OTUD7BQ6GQQ9 843 aa4.16□□□□□ -1.74
RBM28-207ENST00000488249 SYT12Q8IV01 421 aa4.16□□□□□ -1.74
RBM28-207ENST00000488249 ZGPATQ8N5A5 531 aaKnown RBP4.16□□□□□ -1.74
RBM28-207ENST00000488249 RNF169Q8NCN4 708 aa4.16□□□□□ -1.74
RBM28-207ENST00000488249 OR10H5Q8NGA6 315 aa4.16□□□□□ -1.74
RBM28-207ENST00000488249 CEP89Q96ST8 783 aa4.16□□□□□ -1.74
RBM28-207ENST00000488249 EIF2B4Q9UI10 523 aaKnown RBP4.16□□□□□ -1.74
RBM28-207ENST00000488249 SERPINB13Q9UIV8 391 aa4.16□□□□□ -1.74
RBM28-207ENST00000488249 PCDHA13Q9Y5I0 950 aa4.16□□□□□ -1.74
RBM28-207ENST00000488249 ACTL7AQ9Y615 435 aa4.16□□□□□ -1.74
RBM28-207ENST00000488249 ARID4BQ4LE39 1312 aaPredicted RBP4.16□□□□□ -1.74
RBM28-207ENST00000488249 PNPLA7Q6ZV29 1317 aa4.16□□□□□ -1.74
RBM28-207ENST00000488249 MYBBP1AQ9BQG0 1328 aaKnown RBP4.16□□□□□ -1.74
RBM28-207ENST00000488249 CCDC154A6NI56 674 aa4.15□□□□□ -1.75
RBM28-207ENST00000488249 NPIPB8E9PQR5 432 aa4.15□□□□□ -1.75
RBM28-207ENST00000488249 ALDH1L1O75891 902 aa4.15□□□□□ -1.75
RBM28-207ENST00000488249 SCAF4O95104 1147 aaKnown RBP4.15□□□□□ -1.75
RBM28-207ENST00000488249 C6P13671 934 aa4.15□□□□□ -1.75
RBM28-207ENST00000488249 ATP5JP18859 108 aa4.15□□□□□ -1.75
RBM28-207ENST00000488249 TACR2P21452 398 aa4.15□□□□□ -1.75
RBM28-207ENST00000488249 PTTG1IPP53801 180 aa4.15□□□□□ -1.75
RBM28-207ENST00000488249 RAP2BP61225 183 aa4.15□□□□□ -1.75
RBM28-207ENST00000488249 ZXDAP98168 799 aa4.15□□□□□ -1.75
RBM28-207ENST00000488249 ATP8B2P98198 1209 aa4.15□□□□□ -1.75
RBM28-207ENST00000488249 CDC42EP1Q00587 391 aa4.15□□□□□ -1.75
RBM28-207ENST00000488249 NHLH2Q02577 135 aa4.15□□□□□ -1.75
RBM28-207ENST00000488249 IL10RAQ13651 578 aa4.15□□□□□ -1.75
RBM28-207ENST00000488249 TUBA3CQ13748 450 aa4.15□□□□□ -1.75
RBM28-207ENST00000488249 C3orf36Q3SXR2 165 aa4.15□□□□□ -1.75
RBM28-207ENST00000488249 TUBA3EQ6PEY2 450 aa4.15□□□□□ -1.75
RBM28-207ENST00000488249 TICAM2Q86XR7 235 aa4.15□□□□□ -1.75
RBM28-207ENST00000488249 DRC7Q8IY82 874 aa4.15□□□□□ -1.75
RBM28-207ENST00000488249 CMTR2Q8IYT2 770 aaKnown RBP4.15□□□□□ -1.75
RBM28-207ENST00000488249 Q8N1X5 172 aa4.15□□□□□ -1.75
RBM28-207ENST00000488249 MIER2Q8N344 545 aa4.15□□□□□ -1.75
RBM28-207ENST00000488249 CPA6Q8N4T0 437 aa4.15□□□□□ -1.75
RBM28-207ENST00000488249 CPT1CQ8TCG5 803 aa4.15□□□□□ -1.75
RBM28-207ENST00000488249 DCLRE1CQ96SD1 692 aaKnown RBP4.15□□□□□ -1.75
RBM28-207ENST00000488249 TDP1Q9NUW8 608 aa4.15□□□□□ -1.75
RBM28-207ENST00000488249 LUC7L2Q9Y383 392 aaKnown RBP4.15□□□□□ -1.75
RBM28-207ENST00000488249 DRGXA6NNA5 263 aa4.14□□□□□ -1.75
RBM28-207ENST00000488249 AHRRA9YTQ3 701 aa4.14□□□□□ -1.75
RBM28-207ENST00000488249 DIRC3C9JPN6 131 aa4.14□□□□□ -1.75
RBM28-207ENST00000488249 SGTAO43765 313 aa4.14□□□□□ -1.75
RBM28-207ENST00000488249 POMCP01189 267 aa4.14□□□□□ -1.75
RBM28-207ENST00000488249 CTXN1P60606 82 aa4.14□□□□□ -1.75
RBM28-207ENST00000488249 TARDBPQ13148 414 aaKnown RBP eCLIP4.14□□□□□ -1.75
RBM28-207ENST00000488249 UBXN2BQ14CS0 331 aa4.14□□□□□ -1.75
RBM28-207ENST00000488249 TTF1Q15361 905 aaPredicted RBP4.14□□□□□ -1.75
RBM28-207ENST00000488249 FNDC7Q5VTL7 733 aa4.14□□□□□ -1.75
RBM28-207ENST00000488249 METRNLQ641Q3 311 aa4.14□□□□□ -1.75
RBM28-207ENST00000488249 PPP4R3AQ6IN85 833 aa4.14□□□□□ -1.75
RBM28-207ENST00000488249 SEM1Q6ZVN7 128 aa4.14□□□□□ -1.75
RBM28-207ENST00000488249 RSPH3Q86UC2 560 aa4.14□□□□□ -1.75
RBM28-207ENST00000488249 PLXDC1Q8IUK5 500 aa4.14□□□□□ -1.75
RBM28-207ENST00000488249 ZNF276Q8N554 614 aa4.14□□□□□ -1.75
RBM28-207ENST00000488249 RAB24Q969Q5 203 aa4.14□□□□□ -1.75
RBM28-207ENST00000488249 HOOK2Q96ED9 719 aa4.14□□□□□ -1.75
RBM28-207ENST00000488249 TMX3Q96JJ7 454 aa4.14□□□□□ -1.75
RBM28-207ENST00000488249 FAM193BQ96PV7 902 aaPredicted RBP4.14□□□□□ -1.75
RBM28-207ENST00000488249 PSMD1Q99460 953 aa4.14□□□□□ -1.75
RBM28-207ENST00000488249 MYOCQ99972 504 aa4.14□□□□□ -1.75
RBM28-207ENST00000488249 TCF7L1Q9HCS4 588 aa4.14□□□□□ -1.75
RBM28-207ENST00000488249 AASDHPPTQ9NRN7 309 aa4.14□□□□□ -1.75
RBM28-207ENST00000488249 FAM30AQ9NZY2 134 aa4.14□□□□□ -1.75
RBM28-207ENST00000488249 NIPSNAP3AQ9UFN0 247 aaPredicted RBP4.14□□□□□ -1.75
RBM28-207ENST00000488249 SLC23A1Q9UHI7 598 aa4.14□□□□□ -1.75
RBM28-207ENST00000488249 RUVBL1Q9Y265 456 aaKnown RBP4.14□□□□□ -1.75
RBM28-207ENST00000488249 CHST2Q9Y4C5 530 aa4.14□□□□□ -1.75
RBM28-207ENST00000488249 NARSO43776 548 aaKnown RBP4.13□□□□□ -1.75
RBM28-207ENST00000488249 FZD7O75084 574 aa4.13□□□□□ -1.75
RBM28-207ENST00000488249 RPLP2P05387 115 aaKnown RBP4.13□□□□□ -1.75
RBM28-207ENST00000488249 ZSCAN20P17040 1043 aaPredicted RBP4.13□□□□□ -1.75
RBM28-207ENST00000488249 CHN2P52757 468 aa4.13□□□□□ -1.75
RBM28-207ENST00000488249 RNASE9P60153 205 aaKnown RBP4.13□□□□□ -1.75
Retrieved 100 of 20,778 RNA–protein pairs in 47.3 ms