RNA–Protein interactions for RNA: ENST00000467378.1

USP11-205, Transcript of ubiquitin specific peptidase 11, humanhuman

TSL 3

Gene USP11, Length 696 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP11-205ENST00000467378 FSD2A1L4K1 749 aa20.95■□□□□ 0.94
USP11-205ENST00000467378 ZNF623O75123 536 aa20.95■□□□□ 0.94
USP11-205ENST00000467378 PPP1R37O75864 691 aa20.95■□□□□ 0.94
USP11-205ENST00000467378 SRGAP2BP0DMP2 458 aa20.95■□□□□ 0.94
USP11-205ENST00000467378 GATMP50440 423 aa20.95■□□□□ 0.94
USP11-205ENST00000467378 DUSP6Q16828 381 aa20.95■□□□□ 0.94
USP11-205ENST00000467378 ZC2HC1CQ53FD0 456 aaPredicted RBP20.95■□□□□ 0.94
USP11-205ENST00000467378 CDCA3Q99618 268 aaPredicted RBP20.95■□□□□ 0.94
USP11-205ENST00000467378 ACO2Q99798 780 aaKnown RBP20.95■□□□□ 0.94
USP11-205ENST00000467378 EIF2AQ9BY44 585 aaKnown RBP20.95■□□□□ 0.94
USP11-205ENST00000467378 FGFBP2Q9BYJ0 223 aa20.95■□□□□ 0.94
USP11-205ENST00000467378 PDZD7Q9H5P4 517 aa20.95■□□□□ 0.94
USP11-205ENST00000467378 MRPL44Q9H9J2 332 aaKnown RBP20.95■□□□□ 0.94
USP11-205ENST00000467378 TMEM161AQ9NX61 479 aa20.95■□□□□ 0.94
USP11-205ENST00000467378 TBX20Q9UMR3 447 aa20.95■□□□□ 0.94
USP11-205ENST00000467378 PCDHB7Q9Y5E2 793 aa20.95■□□□□ 0.94
USP11-205ENST00000467378 PCDHB12Q9Y5F1 795 aa20.95■□□□□ 0.94
USP11-205ENST00000467378 EOMESO95936 686 aa20.94■□□□□ 0.94
USP11-205ENST00000467378 RAB27AP51159 221 aa20.94■□□□□ 0.94
USP11-205ENST00000467378 UBE3AQ05086 875 aa20.94■□□□□ 0.94
USP11-205ENST00000467378 DPYDQ12882 1025 aa20.94■□□□□ 0.94
USP11-205ENST00000467378 STRN3Q13033 797 aa20.94■□□□□ 0.94
USP11-205ENST00000467378 EEF1DP3Q658K8 133 aa20.94■□□□□ 0.94
USP11-205ENST00000467378 SLC27A1Q6PCB7 646 aa20.94■□□□□ 0.94
USP11-205ENST00000467378 MRPL10Q7Z7H8 261 aaKnown RBP20.94■□□□□ 0.94
USP11-205ENST00000467378 HPS3Q969F9 1004 aa20.94■□□□□ 0.94
USP11-205ENST00000467378 MRPL4Q9BYD3 311 aaKnown RBP20.94■□□□□ 0.94
USP11-205ENST00000467378 PTPRHQ9HD43 1115 aa20.94■□□□□ 0.94
USP11-205ENST00000467378 RNF216Q9NWF9 866 aaPredicted RBP20.94■□□□□ 0.94
USP11-205ENST00000467378 TNFSF13BQ9Y275 285 aa20.94■□□□□ 0.94
USP11-205ENST00000467378 PCDHB2Q9Y5E7 798 aa20.94■□□□□ 0.94
USP11-205ENST00000467378 N4BP3O15049 544 aa20.93■□□□□ 0.94
USP11-205ENST00000467378 SKIP12755 728 aa20.93■□□□□ 0.94
USP11-205ENST00000467378 ABCD1P33897 745 aa20.93■□□□□ 0.94
USP11-205ENST00000467378 CASP5P51878 434 aa20.93■□□□□ 0.94
USP11-205ENST00000467378 MTMR3Q13615 1198 aa20.93■□□□□ 0.94
USP11-205ENST00000467378 ATF7IP2Q5U623 682 aa20.93■□□□□ 0.94
USP11-205ENST00000467378 ANKRD54Q6NXT1 300 aa20.93■□□□□ 0.94
USP11-205ENST00000467378 ELOA2Q8IYF1 753 aaPredicted RBP20.93■□□□□ 0.94
USP11-205ENST00000467378 UBALD2Q8IYN6 164 aa20.93■□□□□ 0.94
USP11-205ENST00000467378 SMG8Q8ND04 991 aaKnown RBP20.93■□□□□ 0.94
USP11-205ENST00000467378 TARS2Q9BW92 718 aaKnown RBP20.93■□□□□ 0.94
USP11-205ENST00000467378 S1PR5Q9H228 398 aa20.93■□□□□ 0.94
USP11-205ENST00000467378 SORCS3Q9UPU3 1222 aa20.93■□□□□ 0.94
USP11-205ENST00000467378 NR2E1Q9Y466 385 aa20.93■□□□□ 0.94
USP11-205ENST00000467378 ABLIM1O14639 778 aa20.92■□□□□ 0.94
USP11-205ENST00000467378 NPTXRO95502 500 aa20.92■□□□□ 0.94
USP11-205ENST00000467378 PIGRP01833 764 aa20.92■□□□□ 0.94
USP11-205ENST00000467378 MYBP10242 640 aa20.92■□□□□ 0.94
USP11-205ENST00000467378 PROZP22891 400 aa20.92■□□□□ 0.94
USP11-205ENST00000467378 ERVFC1P60507 584 aa20.92■□□□□ 0.94
USP11-205ENST00000467378 POSTNQ15063 836 aa20.92■□□□□ 0.94
USP11-205ENST00000467378 KMT5BQ4FZB7 885 aa20.92■□□□□ 0.94
USP11-205ENST00000467378 LLGL2Q6P1M3 1020 aa20.92■□□□□ 0.94
USP11-205ENST00000467378 ZPBP2Q6X784 338 aa20.92■□□□□ 0.94
USP11-205ENST00000467378 MAP4K3Q8IVH8 894 aa20.92■□□□□ 0.94
USP11-205ENST00000467378 HVCN1Q96D96 273 aa20.92■□□□□ 0.94
USP11-205ENST00000467378 CCDC34Q96HJ3 373 aa20.92■□□□□ 0.94
USP11-205ENST00000467378 AAASQ9NRG9 546 aa20.92■□□□□ 0.94
USP11-205ENST00000467378 RNF19AQ9NV58 838 aa20.92■□□□□ 0.94
USP11-205ENST00000467378 TRIP11Q15643 1979 aa20.92■□□□□ 0.94
USP11-205ENST00000467378 GVINP1Q7Z2Y8 2422 aa20.92■□□□□ 0.94
USP11-205ENST00000467378 GCNT3O95395 438 aa20.91■□□□□ 0.94
USP11-205ENST00000467378 RPN1P04843 607 aaKnown RBP20.91■□□□□ 0.94
USP11-205ENST00000467378 PNOCQ13519 176 aa20.91■□□□□ 0.94
USP11-205ENST00000467378 TMEM132AQ24JP5 1023 aa20.91■□□□□ 0.94
USP11-205ENST00000467378 FAM26FQ5R3K3 315 aa20.91■□□□□ 0.94
USP11-205ENST00000467378 ASTLQ6HA08 431 aaPredicted RBP20.91■□□□□ 0.94
USP11-205ENST00000467378 EPM2AIP1Q7L775 607 aaPredicted RBP20.91■□□□□ 0.94
USP11-205ENST00000467378 THNSL1Q8IYQ7 743 aa20.91■□□□□ 0.94
USP11-205ENST00000467378 GLIS3Q8NEA6 775 aa20.91■□□□□ 0.94
USP11-205ENST00000467378 ZBTB45Q96K62 511 aaPredicted RBP20.91■□□□□ 0.94
USP11-205ENST00000467378 MFSD1Q9H3U5 465 aa20.91■□□□□ 0.94
USP11-205ENST00000467378 IPPQ9Y573 584 aa20.91■□□□□ 0.94
USP11-205ENST00000467378 PCDHB13Q9Y5F0 798 aa20.91■□□□□ 0.94
USP11-205ENST00000467378 MEIS3P2A8K0S8 358 aa20.9■□□□□ 0.94
USP11-205ENST00000467378 KINO60870 393 aaKnown RBP20.9■□□□□ 0.94
USP11-205ENST00000467378 FGF18O76093 207 aa20.9■□□□□ 0.94
USP11-205ENST00000467378 KCNA1Q09470 495 aa20.9■□□□□ 0.94
USP11-205ENST00000467378 PSMD2Q13200 908 aa20.9■□□□□ 0.94
USP11-205ENST00000467378 ALCAMQ13740 583 aa20.9■□□□□ 0.94
USP11-205ENST00000467378 L1TD1Q5T7N2 865 aaKnown RBP20.9■□□□□ 0.94
USP11-205ENST00000467378 PLPP4Q5VZY2 271 aa20.9■□□□□ 0.94
USP11-205ENST00000467378 SYCE2Q6PIF2 218 aa20.9■□□□□ 0.94
USP11-205ENST00000467378 AGMOQ6ZNB7 445 aa20.9■□□□□ 0.94
USP11-205ENST00000467378 RNF169Q8NCN4 708 aa20.9■□□□□ 0.94
USP11-205ENST00000467378 LPPQ93052 612 aa20.9■□□□□ 0.94
USP11-205ENST00000467378 PGBD4Q96DM1 585 aa20.9■□□□□ 0.94
USP11-205ENST00000467378 ADPGKQ9BRR6 497 aa20.9■□□□□ 0.94
USP11-205ENST00000467378 RNF39Q9H2S5 420 aa20.9■□□□□ 0.94
USP11-205ENST00000467378 TDRD15B5MCY1 1934 aaKnown RBP20.9■□□□□ 0.94
USP11-205ENST00000467378 TOM1L1O75674 476 aa20.89■□□□□ 0.93
USP11-205ENST00000467378 PRPF6O94906 941 aaKnown RBP20.89■□□□□ 0.93
USP11-205ENST00000467378 FGFR1P11362 822 aa20.89■□□□□ 0.93
USP11-205ENST00000467378 CLLU1OSQ5K130 101 aa20.89■□□□□ 0.93
USP11-205ENST00000467378 PDE12Q6L8Q7 609 aaKnown RBP20.89■□□□□ 0.93
USP11-205ENST00000467378 MPZL3Q6UWV2 235 aa20.89■□□□□ 0.93
USP11-205ENST00000467378 TMEM184AQ6ZMB5 413 aa20.89■□□□□ 0.93
USP11-205ENST00000467378 ZNF507Q8TCN5 953 aa20.89■□□□□ 0.93
USP11-205ENST00000467378 ACCSQ96QU6 501 aa20.89■□□□□ 0.93
Retrieved 100 of 20,778 RNA–protein pairs in 38.3 ms