RNA–Protein interactions for RNA: ENST00000464654.1

TM9SF3-203, Transcript of transmembrane 9 superfamily member 3, humanhuman

TSL 5

Gene TM9SF3, Length 658 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TM9SF3-203ENST00000464654 NCR1O76036 304 aa4.85□□□□□ -1.63
TM9SF3-203ENST00000464654 CANXP27824 592 aaKnown RBP4.85□□□□□ -1.63
TM9SF3-203ENST00000464654 ADSLP30566 484 aaPredicted RBP4.85□□□□□ -1.63
TM9SF3-203ENST00000464654 PTTG1IPP53801 180 aa4.85□□□□□ -1.63
TM9SF3-203ENST00000464654 ATXN7L2Q5T6C5 722 aaPredicted RBP4.85□□□□□ -1.63
TM9SF3-203ENST00000464654 OTUD7BQ6GQQ9 843 aa4.85□□□□□ -1.63
TM9SF3-203ENST00000464654 NECAB2Q7Z6G3 386 aa4.85□□□□□ -1.63
TM9SF3-203ENST00000464654 RHOT2Q8IXI1 618 aa4.85□□□□□ -1.63
TM9SF3-203ENST00000464654 SLC35B2Q8TB61 432 aa4.85□□□□□ -1.63
TM9SF3-203ENST00000464654 ADI1Q9BV57 179 aa4.85□□□□□ -1.63
TM9SF3-203ENST00000464654 PUS7LQ9H0K6 701 aaKnown RBP4.85□□□□□ -1.63
TM9SF3-203ENST00000464654 SERHL2Q9H4I8 314 aa4.85□□□□□ -1.63
TM9SF3-203ENST00000464654 MCM8Q9UJA3 840 aa4.85□□□□□ -1.63
TM9SF3-203ENST00000464654 FPGT-TNNI3KV9GXZ4 949 aa4.85□□□□□ -1.63
TM9SF3-203ENST00000464654 WASHC2AQ641Q2 1341 aa4.85□□□□□ -1.63
TM9SF3-203ENST00000464654 PNPLA7Q6ZV29 1317 aa4.84□□□□□ -1.63
TM9SF3-203ENST00000464654 TGM1P22735 817 aa4.84□□□□□ -1.63
TM9SF3-203ENST00000464654 PROZP22891 400 aa4.84□□□□□ -1.63
TM9SF3-203ENST00000464654 WASP42768 502 aa4.84□□□□□ -1.63
TM9SF3-203ENST00000464654 MXRA7P84157 204 aa4.84□□□□□ -1.63
TM9SF3-203ENST00000464654 KLF1Q13351 362 aaPredicted RBP4.84□□□□□ -1.63
TM9SF3-203ENST00000464654 PDCD4Q53EL6 469 aaKnown RBP4.84□□□□□ -1.63
TM9SF3-203ENST00000464654 VRK3Q8IV63 474 aa4.84□□□□□ -1.63
TM9SF3-203ENST00000464654 PQLC1Q8N2U9 271 aa4.84□□□□□ -1.63
TM9SF3-203ENST00000464654 RNF169Q8NCN4 708 aa4.84□□□□□ -1.63
TM9SF3-203ENST00000464654 REPS2Q8NFH8 660 aa4.84□□□□□ -1.63
TM9SF3-203ENST00000464654 ATL2Q8NHH9 583 aa4.84□□□□□ -1.63
TM9SF3-203ENST00000464654 DDX55Q8NHQ9 600 aaKnown RBP eCLIP4.84□□□□□ -1.63
TM9SF3-203ENST00000464654 COQ10AQ96MF6 247 aa4.84□□□□□ -1.63
TM9SF3-203ENST00000464654 UHRF1Q96T88 793 aaPredicted RBP4.84□□□□□ -1.63
TM9SF3-203ENST00000464654 WDR26Q9H7D7 661 aa4.84□□□□□ -1.63
TM9SF3-203ENST00000464654 GPR45Q9Y5Y3 372 aa4.84□□□□□ -1.63
TM9SF3-203ENST00000464654 ZNF185O15231 689 aa4.83□□□□□ -1.64
TM9SF3-203ENST00000464654 NDUFA10O95299 355 aa4.83□□□□□ -1.64
TM9SF3-203ENST00000464654 CFIP05156 583 aa4.83□□□□□ -1.64
TM9SF3-203ENST00000464654 AGXTP21549 392 aa4.83□□□□□ -1.64
TM9SF3-203ENST00000464654 DDX6P26196 483 aaKnown RBP eCLIP4.83□□□□□ -1.64
TM9SF3-203ENST00000464654 ADRA1BP35368 520 aa4.83□□□□□ -1.64
TM9SF3-203ENST00000464654 ZEB1P37275 1124 aaPredicted RBP4.83□□□□□ -1.64
TM9SF3-203ENST00000464654 PER3P56645 1201 aa4.83□□□□□ -1.64
TM9SF3-203ENST00000464654 CCT2P78371 535 aaKnown RBP4.83□□□□□ -1.64
TM9SF3-203ENST00000464654 AFMIDQ63HM1 303 aa4.83□□□□□ -1.64
TM9SF3-203ENST00000464654 MRI1Q9BV20 369 aa4.83□□□□□ -1.64
TM9SF3-203ENST00000464654 REXO4Q9GZR2 422 aaKnown RBP4.83□□□□□ -1.64
TM9SF3-203ENST00000464654 CYP4F11Q9HBI6 524 aa4.83□□□□□ -1.64
TM9SF3-203ENST00000464654 SPC25Q9HBM1 224 aa4.83□□□□□ -1.64
TM9SF3-203ENST00000464654 DMRT3Q9NQL9 472 aa4.83□□□□□ -1.64
TM9SF3-203ENST00000464654 TMEM140Q9NV12 185 aa4.83□□□□□ -1.64
TM9SF3-203ENST00000464654 ATP11BQ9Y2G3 1177 aa4.83□□□□□ -1.64
TM9SF3-203ENST00000464654 PIPSLA2A3N6 862 aa4.82□□□□□ -1.64
TM9SF3-203ENST00000464654 POMCP01189 267 aa4.82□□□□□ -1.64
TM9SF3-203ENST00000464654 GSPT1P15170 499 aaKnown RBP4.82□□□□□ -1.64
TM9SF3-203ENST00000464654 ATP5JP18859 108 aa4.82□□□□□ -1.64
TM9SF3-203ENST00000464654 AVPR1BP47901 424 aa4.82□□□□□ -1.64
TM9SF3-203ENST00000464654 CHN2P52757 468 aa4.82□□□□□ -1.64
TM9SF3-203ENST00000464654 USP14P54578 494 aa4.82□□□□□ -1.64
TM9SF3-203ENST00000464654 GUCY1B3Q02153 619 aa4.82□□□□□ -1.64
TM9SF3-203ENST00000464654 NOMO1Q15155 1222 aa4.82□□□□□ -1.64
TM9SF3-203ENST00000464654 INAVAQ3KP66 663 aa4.82□□□□□ -1.64
TM9SF3-203ENST00000464654 ABHD17BQ5VST6 288 aa4.82□□□□□ -1.64
TM9SF3-203ENST00000464654 Q6YL49 198 aa4.82□□□□□ -1.64
TM9SF3-203ENST00000464654 SEM1Q6ZVN7 128 aa4.82□□□□□ -1.64
TM9SF3-203ENST00000464654 AMOTL1Q8IY63 956 aa4.82□□□□□ -1.64
TM9SF3-203ENST00000464654 CPEB3Q8NE35 698 aaKnown RBP4.82□□□□□ -1.64
TM9SF3-203ENST00000464654 COG1Q8WTW3 980 aa4.82□□□□□ -1.64
TM9SF3-203ENST00000464654 FUBP1Q96AE4 644 aaKnown RBP4.82□□□□□ -1.64
TM9SF3-203ENST00000464654 FUBP3Q96I24 572 aaKnown RBP eCLIP4.82□□□□□ -1.64
TM9SF3-203ENST00000464654 NEU1Q99519 415 aa4.82□□□□□ -1.64
TM9SF3-203ENST00000464654 SENP6Q9GZR1 1112 aaPredicted RBP4.82□□□□□ -1.64
TM9SF3-203ENST00000464654 MANSC1Q9H8J5 431 aa4.82□□□□□ -1.64
TM9SF3-203ENST00000464654 SYBUQ9NX95 663 aa4.82□□□□□ -1.64
TM9SF3-203ENST00000464654 SLC5A4Q9NY91 659 aa4.82□□□□□ -1.64
TM9SF3-203ENST00000464654 USP15Q9Y4E8 981 aaPredicted RBP4.82□□□□□ -1.64
TM9SF3-203ENST00000464654 WNT10BO00744 389 aa4.81□□□□□ -1.64
TM9SF3-203ENST00000464654 LPXNO60711 386 aa4.81□□□□□ -1.64
TM9SF3-203ENST00000464654 LMNAP02545 664 aaKnown RBP4.81□□□□□ -1.64
TM9SF3-203ENST00000464654 SLC6A9P48067 706 aa4.81□□□□□ -1.64
TM9SF3-203ENST00000464654 KRT85P78386 507 aa4.81□□□□□ -1.64
TM9SF3-203ENST00000464654 SEPT2Q15019 361 aa4.81□□□□□ -1.64
TM9SF3-203ENST00000464654 HECTD2Q5U5R9 776 aa4.81□□□□□ -1.64
TM9SF3-203ENST00000464654 DDX42Q86XP3 938 aaKnown RBP eCLIP4.81□□□□□ -1.64
TM9SF3-203ENST00000464654 ABCF1Q8NE71 845 aaKnown RBP eCLIP4.81□□□□□ -1.64
TM9SF3-203ENST00000464654 OR56A1Q8NGH5 318 aa4.81□□□□□ -1.64
TM9SF3-203ENST00000464654 LINC00476Q8WZB0 136 aa4.81□□□□□ -1.64
TM9SF3-203ENST00000464654 ZG16BQ96DA0 208 aa4.81□□□□□ -1.64
TM9SF3-203ENST00000464654 ADAM2Q99965 735 aa4.81□□□□□ -1.64
TM9SF3-203ENST00000464654 TEX101Q9BY14 249 aa4.81□□□□□ -1.64
TM9SF3-203ENST00000464654 WDR11Q9BZH6 1224 aa4.81□□□□□ -1.64
TM9SF3-203ENST00000464654 KLHL11Q9NVR0 708 aa4.81□□□□□ -1.64
TM9SF3-203ENST00000464654 AJAP1Q9UKB5 411 aaPredicted RBP4.81□□□□□ -1.64
TM9SF3-203ENST00000464654 SIK3Q9Y2K2 1263 aa4.81□□□□□ -1.64
TM9SF3-203ENST00000464654 ATP8A1Q9Y2Q0 1164 aa4.81□□□□□ -1.64
TM9SF3-203ENST00000464654 PCDHGA2Q9Y5H1 932 aa4.81□□□□□ -1.64
TM9SF3-203ENST00000464654 PPFIA2O75334 1257 aa4.8□□□□□ -1.64
TM9SF3-203ENST00000464654 GPR32O75388 356 aa4.8□□□□□ -1.64
TM9SF3-203ENST00000464654 ALAS1P13196 640 aa4.8□□□□□ -1.64
TM9SF3-203ENST00000464654 OSMP13725 252 aa4.8□□□□□ -1.64
TM9SF3-203ENST00000464654 GCSHP23434 173 aa4.8□□□□□ -1.64
TM9SF3-203ENST00000464654 ALDH1A3P47895 512 aa4.8□□□□□ -1.64
TM9SF3-203ENST00000464654 NANOS3P60323 173 aaKnown RBP4.8□□□□□ -1.64
Retrieved 100 of 20,778 RNA–protein pairs in 25.7 ms