RNA–Protein interactions for RNA: ENST00000453705.1

BRCC3-208, Transcript of BRCA1/BRCA2-containing complex subunit 3, humanhuman

TSL 5

Gene BRCC3, Length 2,694 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRCC3-208ENST00000453705 GSK3AP49840 483 aa8.42□□□□□ -1.06
BRCC3-208ENST00000453705 CD83Q01151 205 aa8.42□□□□□ -1.06
BRCC3-208ENST00000453705 SLC39A14Q15043 492 aa8.42□□□□□ -1.06
BRCC3-208ENST00000453705 PKDCCQ504Y2 493 aa8.42□□□□□ -1.06
BRCC3-208ENST00000453705 RNF219Q5W0B1 726 aaPredicted RBP8.42□□□□□ -1.06
BRCC3-208ENST00000453705 SLC22A25Q6T423 547 aa8.42□□□□□ -1.06
BRCC3-208ENST00000453705 TMTC3Q6ZXV5 915 aa8.42□□□□□ -1.06
BRCC3-208ENST00000453705 ARHGAP30Q7Z6I6 1101 aaPredicted RBP8.42□□□□□ -1.06
BRCC3-208ENST00000453705 C2CD5Q86YS7 1000 aa8.42□□□□□ -1.06
BRCC3-208ENST00000453705 CMIPQ8IY22 773 aa8.42□□□□□ -1.06
BRCC3-208ENST00000453705 DAGLBQ8NCG7 672 aa8.42□□□□□ -1.06
BRCC3-208ENST00000453705 ZSWIM2Q8NEG5 633 aa8.42□□□□□ -1.06
BRCC3-208ENST00000453705 SCG3Q8WXD2 468 aaKnown RBP8.42□□□□□ -1.06
BRCC3-208ENST00000453705 RMDN2Q96LZ7 410 aa8.42□□□□□ -1.06
BRCC3-208ENST00000453705 RUNDC3BQ96NL0 473 aa8.42□□□□□ -1.06
BRCC3-208ENST00000453705 ACAT2Q9BWD1 397 aa8.42□□□□□ -1.06
BRCC3-208ENST00000453705 BMP2KQ9NSY1 1161 aaPredicted RBP8.42□□□□□ -1.06
BRCC3-208ENST00000453705 POLLQ9UGP5 575 aa8.42□□□□□ -1.06
BRCC3-208ENST00000453705 DUSP12Q9UNI6 340 aa8.42□□□□□ -1.06
BRCC3-208ENST00000453705 CYP2D7A0A087X1C5 515 aa8.42□□□□□ -1.06
BRCC3-208ENST00000453705 TBKBP1A7MCY6 615 aa8.42□□□□□ -1.06
BRCC3-208ENST00000453705 H0YIN7 160 aa8.42□□□□□ -1.06
BRCC3-208ENST00000453705 DDX3YO15523 660 aaKnown RBP8.42□□□□□ -1.06
BRCC3-208ENST00000453705 AP1G1O43747 822 aa8.42□□□□□ -1.06
BRCC3-208ENST00000453705 PQBP1O60828 265 aaKnown RBP8.42□□□□□ -1.06
BRCC3-208ENST00000453705 RTN2O75298 545 aa8.42□□□□□ -1.06
BRCC3-208ENST00000453705 BMP15O95972 392 aa8.42□□□□□ -1.06
BRCC3-208ENST00000453705 MMP1P03956 469 aa8.42□□□□□ -1.06
BRCC3-208ENST00000453705 POLR3DP05423 398 aaPredicted RBP8.42□□□□□ -1.06
BRCC3-208ENST00000453705 DNAJB1P25685 340 aa8.42□□□□□ -1.06
BRCC3-208ENST00000453705 GRIK1P39086 918 aa8.42□□□□□ -1.06
BRCC3-208ENST00000453705 ADH7P40394 386 aa8.42□□□□□ -1.06
BRCC3-208ENST00000453705 CCNHP51946 323 aaPredicted RBP8.42□□□□□ -1.06
BRCC3-208ENST00000453705 ATXN1P54253 815 aaKnown RBP8.42□□□□□ -1.06
BRCC3-208ENST00000453705 CCNA1P78396 465 aa8.42□□□□□ -1.06
BRCC3-208ENST00000453705 TNIP1Q15025 636 aa8.42□□□□□ -1.06
BRCC3-208ENST00000453705 PTPAQ15257 358 aa8.42□□□□□ -1.06
BRCC3-208ENST00000453705 TBCELQ5QJ74 424 aa8.42□□□□□ -1.06
BRCC3-208ENST00000453705 STXBP5Q5T5C0 1151 aa8.42□□□□□ -1.06
BRCC3-208ENST00000453705 KRT40Q6A162 431 aa8.42□□□□□ -1.06
BRCC3-208ENST00000453705 C16orf46Q6P387 395 aa8.42□□□□□ -1.06
BRCC3-208ENST00000453705 B3GNT9Q6UX72 402 aa8.42□□□□□ -1.06
BRCC3-208ENST00000453705 CCDC80Q76M96 950 aa8.42□□□□□ -1.06
BRCC3-208ENST00000453705 PIP4P2Q8N4L2 257 aa8.42□□□□□ -1.06
BRCC3-208ENST00000453705 C7orf43Q8WVR3 580 aa8.42□□□□□ -1.06
BRCC3-208ENST00000453705 KCNN1Q92952 543 aa8.42□□□□□ -1.06
BRCC3-208ENST00000453705 FUBP3Q96I24 572 aaKnown RBP eCLIP8.42□□□□□ -1.06
BRCC3-208ENST00000453705 TAAR9Q96RI9 348 aa8.42□□□□□ -1.06
BRCC3-208ENST00000453705 ACO2Q99798 780 aaKnown RBP8.42□□□□□ -1.06
BRCC3-208ENST00000453705 UBAC1Q9BSL1 405 aa8.42□□□□□ -1.06
BRCC3-208ENST00000453705 NUP62CLQ9H1M0 184 aa8.42□□□□□ -1.06
BRCC3-208ENST00000453705 EHD4Q9H223 541 aa8.42□□□□□ -1.06
BRCC3-208ENST00000453705 VPS37BQ9H9H4 285 aa8.42□□□□□ -1.06
BRCC3-208ENST00000453705 TRPV5Q9NQA5 729 aa8.42□□□□□ -1.06
BRCC3-208ENST00000453705 HPCAL4Q9UM19 191 aa8.42□□□□□ -1.06
BRCC3-208ENST00000453705 CNTNAP5Q8WYK1 1306 aa8.42□□□□□ -1.06
BRCC3-208ENST00000453705 SYCE3A1L190 88 aa8.41□□□□□ -1.06
BRCC3-208ENST00000453705 TLR3O15455 904 aaKnown RBP8.41□□□□□ -1.06
BRCC3-208ENST00000453705 ATP4AP20648 1035 aa8.41□□□□□ -1.06
BRCC3-208ENST00000453705 PPM1AP35813 382 aa8.41□□□□□ -1.06
BRCC3-208ENST00000453705 GNAQP50148 359 aa8.41□□□□□ -1.06
BRCC3-208ENST00000453705 GTF2A1P52655 376 aaPredicted RBP8.41□□□□□ -1.06
BRCC3-208ENST00000453705 CTAG1AP78358 180 aa8.41□□□□□ -1.06
BRCC3-208ENST00000453705 MAP3K10Q02779 954 aa8.41□□□□□ -1.06
BRCC3-208ENST00000453705 GRM4Q14833 912 aa8.41□□□□□ -1.06
BRCC3-208ENST00000453705 SLC9A5Q14940 896 aa8.41□□□□□ -1.06
BRCC3-208ENST00000453705 NCAPG2Q86XI2 1143 aa8.41□□□□□ -1.06
BRCC3-208ENST00000453705 SPATS2Q86XZ4 545 aaKnown RBP8.41□□□□□ -1.06
BRCC3-208ENST00000453705 FAM9CQ8IZT9 166 aa8.41□□□□□ -1.06
BRCC3-208ENST00000453705 NUP93Q8N1F7 819 aa8.41□□□□□ -1.06
BRCC3-208ENST00000453705 GOLGA6L1Q8N7Z2 621 aa8.41□□□□□ -1.06
BRCC3-208ENST00000453705 ZBTB34Q8NCN2 500 aa8.41□□□□□ -1.06
BRCC3-208ENST00000453705 CCDC148Q8NFR7 591 aa8.41□□□□□ -1.06
BRCC3-208ENST00000453705 ANKRD7Q92527 254 aa8.41□□□□□ -1.06
BRCC3-208ENST00000453705 USP28Q96RU2 1077 aa8.41□□□□□ -1.06
BRCC3-208ENST00000453705 BPIFA3Q9BQP9 254 aa8.41□□□□□ -1.06
BRCC3-208ENST00000453705 MAK16Q9BXY0 300 aaKnown RBP8.41□□□□□ -1.06
BRCC3-208ENST00000453705 EDEM3Q9BZQ6 932 aa8.41□□□□□ -1.06
BRCC3-208ENST00000453705 MTFR1LQ9H019 292 aa8.41□□□□□ -1.06
BRCC3-208ENST00000453705 TNMDQ9H2S6 317 aa8.41□□□□□ -1.06
BRCC3-208ENST00000453705 CRLF2Q9HC73 371 aa8.41□□□□□ -1.06
BRCC3-208ENST00000453705 XAB2Q9HCS7 855 aaKnown RBP8.41□□□□□ -1.06
BRCC3-208ENST00000453705 PTBP2Q9UKA9 531 aaKnown RBP8.41□□□□□ -1.06
BRCC3-208ENST00000453705 PCDHGB4Q9UN71 923 aa8.41□□□□□ -1.06
BRCC3-208ENST00000453705 HPSEQ9Y251 543 aa8.41□□□□□ -1.06
BRCC3-208ENST00000453705 IGKV6D-41A0A0C4DH26 115 aa8.41□□□□□ -1.06
BRCC3-208ENST00000453705 WTIPA6NIX2 430 aaPredicted RBP8.41□□□□□ -1.06
BRCC3-208ENST00000453705 CAPN9O14815 690 aa8.41□□□□□ -1.06
BRCC3-208ENST00000453705 SLFN14P0C7P3 912 aa8.41□□□□□ -1.06
BRCC3-208ENST00000453705 P4HA1P13674 534 aa8.41□□□□□ -1.06
BRCC3-208ENST00000453705 CD9P21926 228 aa8.41□□□□□ -1.06
BRCC3-208ENST00000453705 CMA1P23946 247 aa8.41□□□□□ -1.06
BRCC3-208ENST00000453705 DRG2P55039 364 aaKnown RBP8.41□□□□□ -1.06
BRCC3-208ENST00000453705 GABPAQ06546 454 aa8.41□□□□□ -1.06
BRCC3-208ENST00000453705 ORC2Q13416 577 aaPredicted RBP8.41□□□□□ -1.06
BRCC3-208ENST00000453705 SNW1Q13573 536 aaKnown RBP8.41□□□□□ -1.06
BRCC3-208ENST00000453705 SSPNQ14714 243 aa8.41□□□□□ -1.06
BRCC3-208ENST00000453705 PPP1R7Q15435 360 aa8.41□□□□□ -1.06
BRCC3-208ENST00000453705 FAM209AQ5JX71 171 aa8.41□□□□□ -1.06
BRCC3-208ENST00000453705 RCSD1Q6JBY9 416 aa8.41□□□□□ -1.06
Retrieved 100 of 20,778 RNA–protein pairs in 293 ms