RNA–Protein interactions for RNA: ENST00000452852.1

LINC00393-202, long intergenic non-protein coding RNA 393, humanhuman

TSL 3 BASIC

Gene LINC00393, Length 485 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00393-202ENST00000452852 MAGEA10P43363 369 aaPredicted RBP5.42□□□□□ -1.54
LINC00393-202ENST00000452852 STAT5BP51692 787 aa5.42□□□□□ -1.54
LINC00393-202ENST00000452852 KRTAP10-2P60368 255 aa5.42□□□□□ -1.54
LINC00393-202ENST00000452852 ROM1Q03395 351 aa5.42□□□□□ -1.54
LINC00393-202ENST00000452852 GTF2H3Q13889 308 aa5.42□□□□□ -1.54
LINC00393-202ENST00000452852 GALEQ14376 348 aa5.42□□□□□ -1.54
LINC00393-202ENST00000452852 GBX1Q14549 363 aa5.42□□□□□ -1.54
LINC00393-202ENST00000452852 PCOLCEQ15113 449 aa5.42□□□□□ -1.54
LINC00393-202ENST00000452852 EPHA7Q15375 998 aa5.42□□□□□ -1.54
LINC00393-202ENST00000452852 VPS72Q15906 364 aa5.42□□□□□ -1.54
LINC00393-202ENST00000452852 TBR1Q16650 682 aa5.42□□□□□ -1.54
LINC00393-202ENST00000452852 ZMAT1Q5H9K5 638 aa5.42□□□□□ -1.54
LINC00393-202ENST00000452852 TTC38Q5R3I4 469 aa5.42□□□□□ -1.54
LINC00393-202ENST00000452852 TRIM68Q6AZZ1 485 aa5.42□□□□□ -1.54
LINC00393-202ENST00000452852 SLFN12LQ6IEE8 588 aa5.42□□□□□ -1.54
LINC00393-202ENST00000452852 ESRP1Q6NXG1 681 aaKnown RBP5.42□□□□□ -1.54
LINC00393-202ENST00000452852 CIR1Q86X95 450 aaPredicted RBP5.42□□□□□ -1.54
LINC00393-202ENST00000452852 AMOTL1Q8IY63 956 aa5.42□□□□□ -1.54
LINC00393-202ENST00000452852 BCL6BQ8N143 479 aaPredicted RBP5.42□□□□□ -1.54
LINC00393-202ENST00000452852 PJA1Q8NG27 643 aa5.42□□□□□ -1.54
LINC00393-202ENST00000452852 LMBR1Q8WVP7 490 aa5.42□□□□□ -1.54
LINC00393-202ENST00000452852 NEIL1Q96FI4 390 aaPredicted RBP5.42□□□□□ -1.54
LINC00393-202ENST00000452852 TEKT5Q96M29 485 aa5.42□□□□□ -1.54
LINC00393-202ENST00000452852 LRRC37BQ96QE4 947 aa5.42□□□□□ -1.54
LINC00393-202ENST00000452852 PRDM16Q9HAZ2 1276 aa5.42□□□□□ -1.54
LINC00393-202ENST00000452852 TAGLN3Q9UI15 199 aa5.42□□□□□ -1.54
LINC00393-202ENST00000452852 ST6GALNAC2Q9UJ37 374 aa5.42□□□□□ -1.54
LINC00393-202ENST00000452852 MAGEL2Q9UJ55 1249 aa5.42□□□□□ -1.54
LINC00393-202ENST00000452852 DAAM1Q9Y4D1 1078 aa5.42□□□□□ -1.54
LINC00393-202ENST00000452852 MARF1Q9Y4F3 1742 aaKnown RBP5.42□□□□□ -1.54
LINC00393-202ENST00000452852 TRIM75PA6NK02 468 aa5.41□□□□□ -1.54
LINC00393-202ENST00000452852 AP1G1O43747 822 aa5.41□□□□□ -1.54
LINC00393-202ENST00000452852 MAFO75444 373 aaPredicted RBP5.41□□□□□ -1.54
LINC00393-202ENST00000452852 MRE11P49959 708 aa5.41□□□□□ -1.54
LINC00393-202ENST00000452852 RAC3P60763 192 aa5.41□□□□□ -1.54
LINC00393-202ENST00000452852 MAP3K12Q12852 859 aa5.41□□□□□ -1.54
LINC00393-202ENST00000452852 DHX8Q14562 1220 aaKnown RBP5.41□□□□□ -1.54
LINC00393-202ENST00000452852 ICAM4Q14773 271 aa5.41□□□□□ -1.54
LINC00393-202ENST00000452852 IFIT1BQ5T764 474 aaKnown RBP5.41□□□□□ -1.54
LINC00393-202ENST00000452852 PRAMEF9Q5VWM5 478 aa5.41□□□□□ -1.54
LINC00393-202ENST00000452852 APBB1IPQ7Z5R6 666 aaPredicted RBP5.41□□□□□ -1.54
LINC00393-202ENST00000452852 NME9Q86XW9 330 aa5.41□□□□□ -1.54
LINC00393-202ENST00000452852 RTKN2Q8IZC4 609 aa5.41□□□□□ -1.54
LINC00393-202ENST00000452852 ZNF610Q8N9Z0 462 aa5.41□□□□□ -1.54
LINC00393-202ENST00000452852 C8orf49Q96NF6 230 aa5.41□□□□□ -1.54
LINC00393-202ENST00000452852 GNRHR2Q96P88 292 aa5.41□□□□□ -1.54
LINC00393-202ENST00000452852 TUBGCP5Q96RT8 1024 aa5.41□□□□□ -1.54
LINC00393-202ENST00000452852 ZMAT4Q9H898 229 aa5.41□□□□□ -1.54
LINC00393-202ENST00000452852 INTUQ9ULD6 942 aa5.41□□□□□ -1.54
LINC00393-202ENST00000452852 NR2E1Q9Y466 385 aa5.41□□□□□ -1.54
LINC00393-202ENST00000452852 AFF2P51816 1311 aa5.41□□□□□ -1.54
LINC00393-202ENST00000452852 C1orf167Q5SNV9 1468 aa5.4□□□□□ -1.54
LINC00393-202ENST00000452852 CDK12Q9NYV4 1490 aaPredicted RBP5.4□□□□□ -1.54
LINC00393-202ENST00000452852 RGPD8O14715 1765 aaPredicted RBP5.4□□□□□ -1.54
LINC00393-202ENST00000452852 IFRD1O00458 451 aaPredicted RBP5.4□□□□□ -1.54
LINC00393-202ENST00000452852 KDM1AO60341 852 aa5.4□□□□□ -1.54
LINC00393-202ENST00000452852 HSPA6P17066 643 aa5.4□□□□□ -1.54
LINC00393-202ENST00000452852 PAX3P23760 479 aa5.4□□□□□ -1.54
LINC00393-202ENST00000452852 MEOX1P50221 254 aa5.4□□□□□ -1.54
LINC00393-202ENST00000452852 PHC1P78364 1004 aa5.4□□□□□ -1.54
LINC00393-202ENST00000452852 ADAM17P78536 824 aa5.4□□□□□ -1.54
LINC00393-202ENST00000452852 ADCY1Q08828 1119 aa5.4□□□□□ -1.54
LINC00393-202ENST00000452852 PICALMQ13492 652 aa5.4□□□□□ -1.54
LINC00393-202ENST00000452852 ZNF267Q14586 743 aaPredicted RBP5.4□□□□□ -1.54
LINC00393-202ENST00000452852 MYBPC3Q14896 1274 aa5.4□□□□□ -1.54
LINC00393-202ENST00000452852 C4orf46Q504U0 113 aa5.4□□□□□ -1.54
LINC00393-202ENST00000452852 RRP12Q5JTH9 1297 aaKnown RBP5.4□□□□□ -1.54
LINC00393-202ENST00000452852 AGBL4Q5VU57 503 aa5.4□□□□□ -1.54
LINC00393-202ENST00000452852 B3GNT9Q6UX72 402 aa5.4□□□□□ -1.54
LINC00393-202ENST00000452852 USP30Q70CQ3 517 aa5.4□□□□□ -1.54
LINC00393-202ENST00000452852 TAX1BP1Q86VP1 789 aa5.4□□□□□ -1.54
LINC00393-202ENST00000452852 TTC9BQ8N6N2 239 aa5.4□□□□□ -1.54
LINC00393-202ENST00000452852 CHST13Q8NET6 341 aa5.4□□□□□ -1.54
LINC00393-202ENST00000452852 DNERQ8NFT8 737 aa5.4□□□□□ -1.54
LINC00393-202ENST00000452852 RTF1Q92541 710 aaKnown RBP5.4□□□□□ -1.54
LINC00393-202ENST00000452852 JADE3Q92613 823 aa5.4□□□□□ -1.54
LINC00393-202ENST00000452852 RUNDC1Q96C34 613 aa5.4□□□□□ -1.54
LINC00393-202ENST00000452852 AIFM3Q96NN9 605 aa5.4□□□□□ -1.54
LINC00393-202ENST00000452852 CCM2LQ9NUG4 571 aaPredicted RBP5.4□□□□□ -1.54
LINC00393-202ENST00000452852 CDC42BPGQ6DT37 1551 aa5.4□□□□□ -1.55
LINC00393-202ENST00000452852 COL22A1Q8NFW1 1626 aaPredicted RBP5.4□□□□□ -1.55
LINC00393-202ENST00000452852 KIF1AQ12756 1690 aa5.4□□□□□ -1.55
LINC00393-202ENST00000452852 FMN2Q9NZ56 1722 aa5.4□□□□□ -1.55
LINC00393-202ENST00000452852 EP400Q96L91 3159 aa5.39□□□□□ -1.55
LINC00393-202ENST00000452852 PATE3B3GLJ2 98 aa5.39□□□□□ -1.55
LINC00393-202ENST00000452852 MATN2O00339 956 aa5.39□□□□□ -1.55
LINC00393-202ENST00000452852 ERC2O15083 957 aa5.39□□□□□ -1.55
LINC00393-202ENST00000452852 ARHGAP6O43182 974 aa5.39□□□□□ -1.55
LINC00393-202ENST00000452852 SERPINB3P29508 390 aa5.39□□□□□ -1.55
LINC00393-202ENST00000452852 ANTXR2P58335 489 aa5.39□□□□□ -1.55
LINC00393-202ENST00000452852 KRT85P78386 507 aa5.39□□□□□ -1.55
LINC00393-202ENST00000452852 NFYCQ13952 458 aa5.39□□□□□ -1.55
LINC00393-202ENST00000452852 SAFBQ15424 915 aaKnown RBP eCLIP5.39□□□□□ -1.55
LINC00393-202ENST00000452852 TCTN3Q6NUS6 607 aa5.39□□□□□ -1.55
LINC00393-202ENST00000452852 C11orf96Q7Z7L8 435 aa5.39□□□□□ -1.55
LINC00393-202ENST00000452852 MORC1Q86VD1 984 aa5.39□□□□□ -1.55
LINC00393-202ENST00000452852 SPICE1Q8N0Z3 855 aa5.39□□□□□ -1.55
LINC00393-202ENST00000452852 SLC35G2Q8TBE7 412 aa5.39□□□□□ -1.55
LINC00393-202ENST00000452852 PARD3BQ8TEW8 1205 aa5.39□□□□□ -1.55
LINC00393-202ENST00000452852 DDX17Q92841 729 aaKnown RBP5.39□□□□□ -1.55
Retrieved 100 of 20,778 RNA–protein pairs in 58.2 ms