RNA–Protein interactions for RNA: ENST00000452520.1

HMGB1P26-201, Transcript of high mobility group box 1 pseudogene 26, humanhuman

BASIC

Gene HMGB1P26, Length 628 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB1P26-201ENST00000452520 PRDM11Q9NQV5 511 aa6.34□□□□□ -1.39
HMGB1P26-201ENST00000452520 PLA2G3Q9NZ20 509 aa6.34□□□□□ -1.39
HMGB1P26-201ENST00000452520 CALCOCO1Q9P1Z2 691 aa6.34□□□□□ -1.39
HMGB1P26-201ENST00000452520 DDX20Q9UHI6 824 aaKnown RBP6.34□□□□□ -1.39
HMGB1P26-201ENST00000452520 ACTL7AQ9Y615 435 aa6.34□□□□□ -1.39
HMGB1P26-201ENST00000452520 IFRD1O00458 451 aaPredicted RBP6.33□□□□□ -1.4
HMGB1P26-201ENST00000452520 GPR32O75388 356 aa6.33□□□□□ -1.4
HMGB1P26-201ENST00000452520 MYBP10242 640 aa6.33□□□□□ -1.4
HMGB1P26-201ENST00000452520 FPR1P21462 350 aa6.33□□□□□ -1.4
HMGB1P26-201ENST00000452520 MAP2K6P52564 334 aa6.33□□□□□ -1.4
HMGB1P26-201ENST00000452520 JAG1P78504 1218 aa6.33□□□□□ -1.4
HMGB1P26-201ENST00000452520 SP140Q13342 867 aa6.33□□□□□ -1.4
HMGB1P26-201ENST00000452520 RAB39AQ14964 217 aa6.33□□□□□ -1.4
HMGB1P26-201ENST00000452520 LONRF3Q496Y0 759 aa6.33□□□□□ -1.4
HMGB1P26-201ENST00000452520 KHDC1Q4VXA5 237 aaKnown RBP6.33□□□□□ -1.4
HMGB1P26-201ENST00000452520 FKBP15Q5T1M5 1219 aa6.33□□□□□ -1.4
HMGB1P26-201ENST00000452520 LIMS2Q7Z4I7 341 aa6.33□□□□□ -1.4
HMGB1P26-201ENST00000452520 DENND1CQ8IV53 801 aa6.33□□□□□ -1.4
HMGB1P26-201ENST00000452520 PPP1R35Q8TAP8 253 aa6.33□□□□□ -1.4
HMGB1P26-201ENST00000452520 IFI44Q8TCB0 444 aa6.33□□□□□ -1.4
HMGB1P26-201ENST00000452520 TMX3Q96JJ7 454 aa6.33□□□□□ -1.4
HMGB1P26-201ENST00000452520 ZNF512Q96ME7 567 aaPredicted RBP6.33□□□□□ -1.4
HMGB1P26-201ENST00000452520 FAM193BQ96PV7 902 aaPredicted RBP6.33□□□□□ -1.4
HMGB1P26-201ENST00000452520 OR14A2Q96R54 314 aa6.33□□□□□ -1.4
HMGB1P26-201ENST00000452520 CGRRF1Q99675 332 aa6.33□□□□□ -1.4
HMGB1P26-201ENST00000452520 KCNH6Q9H252 994 aa6.33□□□□□ -1.4
HMGB1P26-201ENST00000452520 KMT5AQ9NQR1 393 aa6.33□□□□□ -1.4
HMGB1P26-201ENST00000452520 MOCS1Q9NZB8 636 aa6.33□□□□□ -1.4
HMGB1P26-201ENST00000452520 POLHQ9Y253 713 aa6.33□□□□□ -1.4
HMGB1P26-201ENST00000452520 FRMPD2Q68DX3 1309 aaPredicted RBP6.32□□□□□ -1.4
HMGB1P26-201ENST00000452520 LRRC14BA6NHZ5 514 aa6.32□□□□□ -1.4
HMGB1P26-201ENST00000452520 GPR42O15529 346 aa6.32□□□□□ -1.4
HMGB1P26-201ENST00000452520 FOXS1O43638 330 aa6.32□□□□□ -1.4
HMGB1P26-201ENST00000452520 TUSC2O75896 110 aa6.32□□□□□ -1.4
HMGB1P26-201ENST00000452520 UBXN7O94888 489 aa6.32□□□□□ -1.4
HMGB1P26-201ENST00000452520 FTLP02792 175 aaPredicted RBP6.32□□□□□ -1.4
HMGB1P26-201ENST00000452520 INHBBP09529 407 aa6.32□□□□□ -1.4
HMGB1P26-201ENST00000452520 FLT3LGP49771 235 aa6.32□□□□□ -1.4
HMGB1P26-201ENST00000452520 HK3P52790 923 aa6.32□□□□□ -1.4
HMGB1P26-201ENST00000452520 ZNF280AP59817 542 aaPredicted RBP6.32□□□□□ -1.4
HMGB1P26-201ENST00000452520 CTXN1P60606 82 aa6.32□□□□□ -1.4
HMGB1P26-201ENST00000452520 PURAQ00577 322 aaKnown RBP6.32□□□□□ -1.4
HMGB1P26-201ENST00000452520 FOXL1Q12952 345 aa6.32□□□□□ -1.4
HMGB1P26-201ENST00000452520 RALBP1Q15311 655 aa6.32□□□□□ -1.4
HMGB1P26-201ENST00000452520 FAM214AQ32MH5 1076 aa6.32□□□□□ -1.4
HMGB1P26-201ENST00000452520 C10orf62Q5T681 223 aaPredicted RBP6.32□□□□□ -1.4
HMGB1P26-201ENST00000452520 AFMIDQ63HM1 303 aa6.32□□□□□ -1.4
HMGB1P26-201ENST00000452520 GLB1LQ6UWU2 654 aa6.32□□□□□ -1.4
HMGB1P26-201ENST00000452520 OVCH2Q7RTZ1 564 aa6.32□□□□□ -1.4
HMGB1P26-201ENST00000452520 C11orf96Q7Z7L8 435 aa6.32□□□□□ -1.4
HMGB1P26-201ENST00000452520 RGMAQ96B86 450 aa6.32□□□□□ -1.4
HMGB1P26-201ENST00000452520 SAMD11Q96NU1 681 aa6.32□□□□□ -1.4
HMGB1P26-201ENST00000452520 VRK1Q99986 396 aaPredicted RBP6.32□□□□□ -1.4
HMGB1P26-201ENST00000452520 SSBP3Q9BWW4 388 aaPredicted RBP6.32□□□□□ -1.4
HMGB1P26-201ENST00000452520 KRTAP4-8Q9BYQ9 185 aa6.32□□□□□ -1.4
HMGB1P26-201ENST00000452520 UBA5Q9GZZ9 404 aa6.32□□□□□ -1.4
HMGB1P26-201ENST00000452520 EPC1Q9H2F5 836 aa6.32□□□□□ -1.4
HMGB1P26-201ENST00000452520 ZFR2Q9UPR6 939 aaKnown RBP6.32□□□□□ -1.4
HMGB1P26-201ENST00000452520 RAD17O75943 681 aa6.31□□□□□ -1.4
HMGB1P26-201ENST00000452520 TRIM27P14373 513 aa6.31□□□□□ -1.4
HMGB1P26-201ENST00000452520 PTH1RQ03431 593 aa6.31□□□□□ -1.4
HMGB1P26-201ENST00000452520 TLE1Q04724 770 aa6.31□□□□□ -1.4
HMGB1P26-201ENST00000452520 NOGQ13253 232 aa6.31□□□□□ -1.4
HMGB1P26-201ENST00000452520 SNAPC2Q13487 334 aa6.31□□□□□ -1.4
HMGB1P26-201ENST00000452520 ANKS6Q68DC2 871 aa6.31□□□□□ -1.4
HMGB1P26-201ENST00000452520 OTUD7BQ6GQQ9 843 aa6.31□□□□□ -1.4
HMGB1P26-201ENST00000452520 GADL1Q6ZQY3 521 aa6.31□□□□□ -1.4
HMGB1P26-201ENST00000452520 CHST15Q7LFX5 561 aaPredicted RBP6.31□□□□□ -1.4
HMGB1P26-201ENST00000452520 CIR1Q86X95 450 aaPredicted RBP6.31□□□□□ -1.4
HMGB1P26-201ENST00000452520 FUKQ8N0W3 1084 aa6.31□□□□□ -1.4
HMGB1P26-201ENST00000452520 SLC35B2Q8TB61 432 aa6.31□□□□□ -1.4
HMGB1P26-201ENST00000452520 RBM15Q96T37 977 aaKnown RBP eCLIP6.31□□□□□ -1.4
HMGB1P26-201ENST00000452520 MPHOSPH9Q99550 1183 aa6.31□□□□□ -1.4
HMGB1P26-201ENST00000452520 LRFN3Q9BTN0 628 aa6.31□□□□□ -1.4
HMGB1P26-201ENST00000452520 MRI1Q9BV20 369 aa6.31□□□□□ -1.4
HMGB1P26-201ENST00000452520 MAN1C1Q9NR34 630 aa6.31□□□□□ -1.4
HMGB1P26-201ENST00000452520 SH3BP1Q9Y3L3 701 aa6.31□□□□□ -1.4
HMGB1P26-201ENST00000452520 PCDHA3Q9Y5H8 950 aa6.31□□□□□ -1.4
HMGB1P26-201ENST00000452520 SLC30A1Q9Y6M5 507 aa6.31□□□□□ -1.4
HMGB1P26-201ENST00000452520 PNPLA7Q6ZV29 1317 aa6.3□□□□□ -1.4
HMGB1P26-201ENST00000452520 CCDC189A1A4V9 331 aa6.3□□□□□ -1.4
HMGB1P26-201ENST00000452520 A6NNZ2 444 aa6.3□□□□□ -1.4
HMGB1P26-201ENST00000452520 TBKBP1A7MCY6 615 aa6.3□□□□□ -1.4
HMGB1P26-201ENST00000452520 CXorf49A8MYA2 514 aaPredicted RBP6.3□□□□□ -1.4
HMGB1P26-201ENST00000452520 TEX33O43247 280 aa6.3□□□□□ -1.4
HMGB1P26-201ENST00000452520 B3GALT2O43825 422 aa6.3□□□□□ -1.4
HMGB1P26-201ENST00000452520 SH3BP5O60239 455 aa6.3□□□□□ -1.4
HMGB1P26-201ENST00000452520 ARIH2O95376 493 aa6.3□□□□□ -1.4
HMGB1P26-201ENST00000452520 IFIT2P09913 472 aaKnown RBP6.3□□□□□ -1.4
HMGB1P26-201ENST00000452520 HOXA5P20719 270 aa6.3□□□□□ -1.4
HMGB1P26-201ENST00000452520 MALP21145 153 aa6.3□□□□□ -1.4
HMGB1P26-201ENST00000452520 HTR1BP28222 390 aa6.3□□□□□ -1.4
HMGB1P26-201ENST00000452520 MSX2P35548 267 aaPredicted RBP6.3□□□□□ -1.4
HMGB1P26-201ENST00000452520 ALDH1A3P47895 512 aa6.3□□□□□ -1.4
HMGB1P26-201ENST00000452520 LLGL1Q15334 1064 aa6.3□□□□□ -1.4
HMGB1P26-201ENST00000452520 CCDC157Q569K6 752 aa6.3□□□□□ -1.4
HMGB1P26-201ENST00000452520 CYB5RLQ6IPT4 315 aa6.3□□□□□ -1.4
HMGB1P26-201ENST00000452520 MFSD5Q6N075 450 aa6.3□□□□□ -1.4
HMGB1P26-201ENST00000452520 FAM83AQ86UY5 434 aa6.3□□□□□ -1.4
HMGB1P26-201ENST00000452520 TICAM2Q86XR7 235 aa6.3□□□□□ -1.4
Retrieved 100 of 20,778 RNA–protein pairs in 45.7 ms