RNA–Protein interactions for RNA: ENST00000441587.2

ALMS1-IT1-201, ALMS1 intronic transcript 1, humanhuman

TSL 1 (best) BASIC

Gene ALMS1-IT1, Length 2,107 nt, Biotype sense intronic.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ALMS1-IT1-201ENST00000441587 RRN3P2A6NIE6 340 aa6.41□□□□□ -1.38
ALMS1-IT1-201ENST00000441587 EYA2O00167 538 aa6.41□□□□□ -1.38
ALMS1-IT1-201ENST00000441587 AREL1O15033 823 aa6.41□□□□□ -1.38
ALMS1-IT1-201ENST00000441587 ZBTB43O43298 467 aa6.41□□□□□ -1.38
ALMS1-IT1-201ENST00000441587 MSCO60682 206 aa6.41□□□□□ -1.38
ALMS1-IT1-201ENST00000441587 KRT37O76014 449 aa6.41□□□□□ -1.38
ALMS1-IT1-201ENST00000441587 SNX4O95219 450 aa6.41□□□□□ -1.38
ALMS1-IT1-201ENST00000441587 STAMBPO95630 424 aa6.41□□□□□ -1.38
ALMS1-IT1-201ENST00000441587 APOA4P06727 396 aa6.41□□□□□ -1.38
ALMS1-IT1-201ENST00000441587 THEGLP0DJG4 465 aa6.41□□□□□ -1.38
ALMS1-IT1-201ENST00000441587 YBX3P16989 372 aaKnown RBP eCLIP6.41□□□□□ -1.38
ALMS1-IT1-201ENST00000441587 USP8P40818 1118 aa6.41□□□□□ -1.38
ALMS1-IT1-201ENST00000441587 SKIV2L2P42285 1042 aaKnown RBP6.41□□□□□ -1.38
ALMS1-IT1-201ENST00000441587 POU4F1Q01851 419 aa6.41□□□□□ -1.38
ALMS1-IT1-201ENST00000441587 UBXN1Q04323 297 aa6.41□□□□□ -1.38
ALMS1-IT1-201ENST00000441587 ZNF174Q15697 407 aa6.41□□□□□ -1.38
ALMS1-IT1-201ENST00000441587 KIZQ2M2Z5 673 aa6.41□□□□□ -1.38
ALMS1-IT1-201ENST00000441587 FKBP15Q5T1M5 1219 aa6.41□□□□□ -1.38
ALMS1-IT1-201ENST00000441587 C20orf194Q5TEA3 1177 aa6.41□□□□□ -1.38
ALMS1-IT1-201ENST00000441587 TMEM132EQ6IEE7 984 aa6.41□□□□□ -1.38
ALMS1-IT1-201ENST00000441587 TATDN1Q6P1N9 297 aa6.41□□□□□ -1.38
ALMS1-IT1-201ENST00000441587 EPHX4Q8IUS5 362 aa6.41□□□□□ -1.38
ALMS1-IT1-201ENST00000441587 DENND1CQ8IV53 801 aa6.41□□□□□ -1.38
ALMS1-IT1-201ENST00000441587 VPS52Q8N1B4 723 aa6.41□□□□□ -1.38
ALMS1-IT1-201ENST00000441587 TNIP2Q8NFZ5 429 aa6.41□□□□□ -1.38
ALMS1-IT1-201ENST00000441587 SSH1Q8WYL5 1049 aa6.41□□□□□ -1.38
ALMS1-IT1-201ENST00000441587 TNPO1Q92973 898 aaKnown RBP6.41□□□□□ -1.38
ALMS1-IT1-201ENST00000441587 NAF1Q96HR8 494 aaKnown RBP6.41□□□□□ -1.38
ALMS1-IT1-201ENST00000441587 FANCD2OSQ96PS1 177 aa6.41□□□□□ -1.38
ALMS1-IT1-201ENST00000441587 CAPS2Q9BXY5 557 aa6.41□□□□□ -1.38
ALMS1-IT1-201ENST00000441587 FOXQ1Q9C009 403 aa6.41□□□□□ -1.38
ALMS1-IT1-201ENST00000441587 NUP62CLQ9H1M0 184 aa6.41□□□□□ -1.38
ALMS1-IT1-201ENST00000441587 TOMM22Q9NS69 142 aa6.41□□□□□ -1.38
ALMS1-IT1-201ENST00000441587 HPF1Q9NWY4 346 aa6.41□□□□□ -1.38
ALMS1-IT1-201ENST00000441587 PSD3Q9NYI0 1048 aa6.41□□□□□ -1.38
ALMS1-IT1-201ENST00000441587 CWC15Q9P013 229 aaKnown RBP6.41□□□□□ -1.38
ALMS1-IT1-201ENST00000441587 POLKQ9UBT6 870 aa6.41□□□□□ -1.38
ALMS1-IT1-201ENST00000441587 TRAF3IP3Q9Y228 551 aa6.41□□□□□ -1.38
ALMS1-IT1-201ENST00000441587 SPO11Q9Y5K1 396 aa6.41□□□□□ -1.38
ALMS1-IT1-201ENST00000441587 IGF2BP2Q9Y6M1 599 aaKnown RBP eCLIP6.41□□□□□ -1.38
ALMS1-IT1-201ENST00000441587 ADGRB1O14514 1584 aa6.41□□□□□ -1.38
ALMS1-IT1-201ENST00000441587 GLI2P10070 1586 aa6.41□□□□□ -1.38
ALMS1-IT1-201ENST00000441587 ARPC4-TTLL3A0A0A6YYG9 625 aa6.4□□□□□ -1.38
ALMS1-IT1-201ENST00000441587 B4DLN1 442 aa6.4□□□□□ -1.38
ALMS1-IT1-201ENST00000441587 H3BML4 177 aa6.4□□□□□ -1.38
ALMS1-IT1-201ENST00000441587 MYO1CO00159 1063 aa6.4□□□□□ -1.38
ALMS1-IT1-201ENST00000441587 MASP2O00187 686 aa6.4□□□□□ -1.38
ALMS1-IT1-201ENST00000441587 SMC2O95347 1197 aa6.4□□□□□ -1.38
ALMS1-IT1-201ENST00000441587 TGDSO95455 350 aa6.4□□□□□ -1.38
ALMS1-IT1-201ENST00000441587 HSPA1AP0DMV8 641 aaKnown RBP6.4□□□□□ -1.38
ALMS1-IT1-201ENST00000441587 HSPA1BP0DMV9 641 aaKnown RBP6.4□□□□□ -1.38
ALMS1-IT1-201ENST00000441587 BMP4P12644 408 aa6.4□□□□□ -1.38
ALMS1-IT1-201ENST00000441587 AKR1B1P15121 316 aa6.4□□□□□ -1.38
ALMS1-IT1-201ENST00000441587 PPM1AP35813 382 aa6.4□□□□□ -1.38
ALMS1-IT1-201ENST00000441587 LTBRP36941 435 aa6.4□□□□□ -1.38
ALMS1-IT1-201ENST00000441587 PHKA1P46020 1223 aa6.4□□□□□ -1.38
ALMS1-IT1-201ENST00000441587 SLC12A2P55011 1212 aa6.4□□□□□ -1.38
ALMS1-IT1-201ENST00000441587 RBM6P78332 1123 aaKnown RBP6.4□□□□□ -1.38
ALMS1-IT1-201ENST00000441587 PPFIA1Q13136 1202 aa6.4□□□□□ -1.38
ALMS1-IT1-201ENST00000441587 TTLL4Q14679 1199 aa6.4□□□□□ -1.38
ALMS1-IT1-201ENST00000441587 RAB3GAP1Q15042 981 aa6.4□□□□□ -1.38
ALMS1-IT1-201ENST00000441587 CCDC178Q5BJE1 867 aa6.4□□□□□ -1.38
ALMS1-IT1-201ENST00000441587 MEX3CQ5U5Q3 659 aaKnown RBP6.4□□□□□ -1.38
ALMS1-IT1-201ENST00000441587 CLEC17AQ6ZS10 378 aa6.4□□□□□ -1.38
ALMS1-IT1-201ENST00000441587 TRIM46Q7Z4K8 759 aa6.4□□□□□ -1.38
ALMS1-IT1-201ENST00000441587 MFSD2AQ8NA29 543 aa6.4□□□□□ -1.38
ALMS1-IT1-201ENST00000441587 UTP15Q8TED0 518 aaKnown RBP6.4□□□□□ -1.38
ALMS1-IT1-201ENST00000441587 FSD1Q9BTV5 496 aa6.4□□□□□ -1.38
ALMS1-IT1-201ENST00000441587 TEX13BQ9BXU2 312 aa6.4□□□□□ -1.38
ALMS1-IT1-201ENST00000441587 PRDM14Q9GZV8 571 aa6.4□□□□□ -1.38
ALMS1-IT1-201ENST00000441587 ATXN3LQ9H3M9 355 aa6.4□□□□□ -1.38
ALMS1-IT1-201ENST00000441587 SSU72Q9NP77 194 aaKnown RBP6.4□□□□□ -1.38
ALMS1-IT1-201ENST00000441587 TCP11L1Q9NUJ3 509 aa6.4□□□□□ -1.38
ALMS1-IT1-201ENST00000441587 GFOD1Q9NXC2 390 aa6.4□□□□□ -1.38
ALMS1-IT1-201ENST00000441587 PRR13Q9NZ81 148 aa6.4□□□□□ -1.38
ALMS1-IT1-201ENST00000441587 ZKSCAN7Q9P0L1 754 aaPredicted RBP6.4□□□□□ -1.38
ALMS1-IT1-201ENST00000441587 CDC23Q9UJX2 597 aa6.4□□□□□ -1.38
ALMS1-IT1-201ENST00000441587 ADARB2-AS1A8MUL3 147 aa6.4□□□□□ -1.39
ALMS1-IT1-201ENST00000441587 NDC80O14777 642 aa6.4□□□□□ -1.39
ALMS1-IT1-201ENST00000441587 KINO60870 393 aaKnown RBP6.4□□□□□ -1.39
ALMS1-IT1-201ENST00000441587 CDKL5O76039 1030 aa6.4□□□□□ -1.39
ALMS1-IT1-201ENST00000441587 DLGAP3O95886 979 aa6.4□□□□□ -1.39
ALMS1-IT1-201ENST00000441587 SLC9A1P19634 815 aa6.4□□□□□ -1.39
ALMS1-IT1-201ENST00000441587 KRT9P35527 623 aa6.4□□□□□ -1.39
ALMS1-IT1-201ENST00000441587 IL6STP40189 918 aaPredicted RBP6.4□□□□□ -1.39
ALMS1-IT1-201ENST00000441587 HADHAP40939 763 aa6.4□□□□□ -1.39
ALMS1-IT1-201ENST00000441587 MTHFRP42898 656 aa6.4□□□□□ -1.39
ALMS1-IT1-201ENST00000441587 MATR3P43243 847 aaKnown RBP eCLIP6.4□□□□□ -1.39
ALMS1-IT1-201ENST00000441587 BAG6P46379 1132 aa6.4□□□□□ -1.39
ALMS1-IT1-201ENST00000441587 PRIM2P49643 509 aa6.4□□□□□ -1.39
ALMS1-IT1-201ENST00000441587 PRR20EP86478 221 aa6.4□□□□□ -1.39
ALMS1-IT1-201ENST00000441587 PRR20CP86479 221 aa6.4□□□□□ -1.39
ALMS1-IT1-201ENST00000441587 PRR20DP86480 221 aa6.4□□□□□ -1.39
ALMS1-IT1-201ENST00000441587 PRR20BP86481 221 aa6.4□□□□□ -1.39
ALMS1-IT1-201ENST00000441587 PRR20AP86496 221 aa6.4□□□□□ -1.39
ALMS1-IT1-201ENST00000441587 AP1B1Q10567 949 aa6.4□□□□□ -1.39
ALMS1-IT1-201ENST00000441587 PDCD1Q15116 288 aa6.4□□□□□ -1.39
ALMS1-IT1-201ENST00000441587 CNGA3Q16281 694 aa6.4□□□□□ -1.39
ALMS1-IT1-201ENST00000441587 PKN1Q16512 942 aa6.4□□□□□ -1.39
ALMS1-IT1-201ENST00000441587 SPDYCQ5MJ68 293 aa6.4□□□□□ -1.39
Retrieved 100 of 20,778 RNA–protein pairs in 23.4 ms