RNA–Protein interactions for RNA: ENST00000440240.5

CPNE1-219, Transcript of copine 1, humanhuman

TSL 5

Gene CPNE1, Length 746 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPNE1-219ENST00000440240 PTPRZ1P23471 2315 aaPredicted RBP22.83■■□□□ 1.25
CPNE1-219ENST00000440240 PROB1E7EW31 1015 aa22.83■■□□□ 1.25
CPNE1-219ENST00000440240 LAMP2P13473 410 aa22.83■■□□□ 1.25
CPNE1-219ENST00000440240 NPR3P17342 541 aa22.83■■□□□ 1.25
CPNE1-219ENST00000440240 PTGDRQ13258 359 aa22.83■■□□□ 1.25
CPNE1-219ENST00000440240 PSMD5Q16401 504 aa22.83■■□□□ 1.25
CPNE1-219ENST00000440240 EEF1DP3Q658K8 133 aa22.83■■□□□ 1.25
CPNE1-219ENST00000440240 DCLRE1AQ6PJP8 1040 aa22.83■■□□□ 1.25
CPNE1-219ENST00000440240 IGSF22Q8N9C0 903 aa22.83■■□□□ 1.25
CPNE1-219ENST00000440240 RSAD2Q8WXG1 361 aa22.83■■□□□ 1.25
CPNE1-219ENST00000440240 POLD4Q9HCU8 107 aa22.83■■□□□ 1.25
CPNE1-219ENST00000440240 DDX19AQ9NUU7 478 aaKnown RBP22.83■■□□□ 1.25
CPNE1-219ENST00000440240 PLXNA3P51805 1871 aa22.83■■□□□ 1.24
CPNE1-219ENST00000440240 LAD1O00515 517 aa22.82■■□□□ 1.24
CPNE1-219ENST00000440240 EDN1P05305 212 aa22.82■■□□□ 1.24
CPNE1-219ENST00000440240 HNRNPA1P09651 372 aaKnown RBP eCLIP22.82■■□□□ 1.24
CPNE1-219ENST00000440240 NT5DC1Q5TFE4 455 aa22.82■■□□□ 1.24
CPNE1-219ENST00000440240 LIN9Q5TKA1 542 aa22.82■■□□□ 1.24
CPNE1-219ENST00000440240 KRT79Q5XKE5 535 aa22.82■■□□□ 1.24
CPNE1-219ENST00000440240 CWF19L1Q69YN2 538 aaKnown RBP22.82■■□□□ 1.24
CPNE1-219ENST00000440240 SNX29Q8TEQ0 813 aa22.82■■□□□ 1.24
CPNE1-219ENST00000440240 KIFC3Q9BVG8 833 aa22.82■■□□□ 1.24
CPNE1-219ENST00000440240 FBXW11Q9UKB1 542 aa22.82■■□□□ 1.24
CPNE1-219ENST00000440240 TNFSF13BQ9Y275 285 aa22.82■■□□□ 1.24
CPNE1-219ENST00000440240 MTCL1Q9Y4B5 1905 aaKnown RBP22.82■■□□□ 1.24
CPNE1-219ENST00000440240 RIF1Q5UIP0 2472 aaKnown RBP22.81■■□□□ 1.24
CPNE1-219ENST00000440240 NARSO43776 548 aaKnown RBP22.81■■□□□ 1.24
CPNE1-219ENST00000440240 SRFP11831 508 aa22.81■■□□□ 1.24
CPNE1-219ENST00000440240 NBR1Q14596 966 aa22.81■■□□□ 1.24
CPNE1-219ENST00000440240 PDZRN4Q6ZMN7 1036 aaPredicted RBP22.81■■□□□ 1.24
CPNE1-219ENST00000440240 UROC1Q96N76 676 aa22.81■■□□□ 1.24
CPNE1-219ENST00000440240 CXCL16Q9H2A7 254 aa22.81■■□□□ 1.24
CPNE1-219ENST00000440240 PHLPP2Q6ZVD8 1323 aa22.81■■□□□ 1.24
CPNE1-219ENST00000440240 CCDC169A6NNP5 214 aa22.8■■□□□ 1.24
CPNE1-219ENST00000440240 TMEM189-UBE2V1I3L0A0 370 aa22.8■■□□□ 1.24
CPNE1-219ENST00000440240 STK25O00506 426 aa22.8■■□□□ 1.24
CPNE1-219ENST00000440240 TRAPPC3O43617 180 aa22.8■■□□□ 1.24
CPNE1-219ENST00000440240 PI15O43692 258 aa22.8■■□□□ 1.24
CPNE1-219ENST00000440240 B3GAT3O94766 335 aa22.8■■□□□ 1.24
CPNE1-219ENST00000440240 CFHP08603 1231 aa22.8■■□□□ 1.24
CPNE1-219ENST00000440240 FSHRP23945 695 aa22.8■■□□□ 1.24
CPNE1-219ENST00000440240 HOXA9P31269 272 aa22.8■■□□□ 1.24
CPNE1-219ENST00000440240 NBL1P41271 181 aa22.8■■□□□ 1.24
CPNE1-219ENST00000440240 TOB1P50616 345 aaPredicted RBP22.8■■□□□ 1.24
CPNE1-219ENST00000440240 YARSP54577 528 aaKnown RBP22.8■■□□□ 1.24
CPNE1-219ENST00000440240 PPM1LQ5SGD2 360 aa22.8■■□□□ 1.24
CPNE1-219ENST00000440240 GET4Q7L5D6 327 aaPredicted RBP22.8■■□□□ 1.24
CPNE1-219ENST00000440240 PPP1R10Q96QC0 940 aaKnown RBP22.8■■□□□ 1.24
CPNE1-219ENST00000440240 KIF2CQ99661 725 aa22.8■■□□□ 1.24
CPNE1-219ENST00000440240 TMEM134Q9H6X4 195 aa22.8■■□□□ 1.24
CPNE1-219ENST00000440240 TOPORSQ9NS56 1045 aaPredicted RBP22.8■■□□□ 1.24
CPNE1-219ENST00000440240 KIF3AQ9Y496 699 aa22.8■■□□□ 1.24
CPNE1-219ENST00000440240 RBM19Q9Y4C8 960 aaKnown RBP22.8■■□□□ 1.24
CPNE1-219ENST00000440240 PCDHB6Q9Y5E3 794 aa22.8■■□□□ 1.24
CPNE1-219ENST00000440240 ANHXE9PGG2 379 aa22.79■■□□□ 1.24
CPNE1-219ENST00000440240 XYLBO75191 536 aa22.79■■□□□ 1.24
CPNE1-219ENST00000440240 C8AP07357 584 aa22.79■■□□□ 1.24
CPNE1-219ENST00000440240 FGFR3P22607 806 aa22.79■■□□□ 1.24
CPNE1-219ENST00000440240 PRPHP41219 470 aa22.79■■□□□ 1.24
CPNE1-219ENST00000440240 NPTX2P47972 431 aa22.79■■□□□ 1.24
CPNE1-219ENST00000440240 PEX3P56589 373 aa22.79■■□□□ 1.24
CPNE1-219ENST00000440240 RAB33AQ14088 237 aa22.79■■□□□ 1.24
CPNE1-219ENST00000440240 UVSSAQ2YD98 709 aa22.79■■□□□ 1.24
CPNE1-219ENST00000440240 DTHD1Q6ZMT9 781 aa22.79■■□□□ 1.24
CPNE1-219ENST00000440240 RTL10Q7L3V2 364 aa22.79■■□□□ 1.24
CPNE1-219ENST00000440240 GRASPQ7Z6J2 395 aaPredicted RBP22.79■■□□□ 1.24
CPNE1-219ENST00000440240 DRC1Q96MC2 740 aa22.79■■□□□ 1.24
CPNE1-219ENST00000440240 CCDC94Q9BW85 323 aaPredicted RBP22.79■■□□□ 1.24
CPNE1-219ENST00000440240 C17orf75Q9HAS0 396 aa22.79■■□□□ 1.24
CPNE1-219ENST00000440240 E9PMD0 336 aa22.78■■□□□ 1.24
CPNE1-219ENST00000440240 OR1D2P34982 312 aa22.78■■□□□ 1.24
CPNE1-219ENST00000440240 GRM5P41594 1212 aa22.78■■□□□ 1.24
CPNE1-219ENST00000440240 CLCNKBP51801 687 aa22.78■■□□□ 1.24
CPNE1-219ENST00000440240 DMP1Q13316 513 aaPredicted RBP22.78■■□□□ 1.24
CPNE1-219ENST00000440240 UPP1Q16831 310 aa22.78■■□□□ 1.24
CPNE1-219ENST00000440240 GLRA4Q5JXX5 417 aa22.78■■□□□ 1.24
CPNE1-219ENST00000440240 CCDC105Q8IYK2 499 aa22.78■■□□□ 1.24
CPNE1-219ENST00000440240 ACO2Q99798 780 aaKnown RBP22.78■■□□□ 1.24
CPNE1-219ENST00000440240 MRPL4Q9BYD3 311 aaKnown RBP22.78■■□□□ 1.24
CPNE1-219ENST00000440240 KMT5AQ9NQR1 393 aa22.78■■□□□ 1.24
CPNE1-219ENST00000440240 KCNG1Q9UIX4 513 aa22.78■■□□□ 1.24
CPNE1-219ENST00000440240 SMIM28A0A1B0GU29 152 aa22.77■■□□□ 1.24
CPNE1-219ENST00000440240 RFX1P22670 979 aa22.77■■□□□ 1.24
CPNE1-219ENST00000440240 HTR4Q13639 388 aa22.77■■□□□ 1.24
CPNE1-219ENST00000440240 AXDND1Q5T1B0 1012 aaPredicted RBP22.77■■□□□ 1.24
CPNE1-219ENST00000440240 ANKS3Q6ZW76 656 aa22.77■■□□□ 1.24
CPNE1-219ENST00000440240 DTWD2Q8NBA8 298 aa22.77■■□□□ 1.24
CPNE1-219ENST00000440240 DDX27Q96GQ7 796 aaKnown RBP22.77■■□□□ 1.24
CPNE1-219ENST00000440240 PTPRHQ9HD43 1115 aa22.77■■□□□ 1.24
CPNE1-219ENST00000440240 SLC38A7Q9NVC3 462 aa22.77■■□□□ 1.24
CPNE1-219ENST00000440240 CDH7Q9ULB5 785 aa22.77■■□□□ 1.24
CPNE1-219ENST00000440240 POLIQ9UNA4 740 aa22.77■■□□□ 1.24
CPNE1-219ENST00000440240 BACE2Q9Y5Z0 518 aa22.77■■□□□ 1.24
CPNE1-219ENST00000440240 MYO15AQ9UKN7 3530 aa22.77■■□□□ 1.24
CPNE1-219ENST00000440240 KRBA1A5PL33 1030 aa22.76■■□□□ 1.23
CPNE1-219ENST00000440240 ADAM12O43184 909 aa22.76■■□□□ 1.23
CPNE1-219ENST00000440240 HIP1RO75146 1068 aa22.76■■□□□ 1.23
CPNE1-219ENST00000440240 POU2F2P09086 479 aa22.76■■□□□ 1.23
CPNE1-219ENST00000440240 ZNF568Q3ZCX4 644 aa22.76■■□□□ 1.23
CPNE1-219ENST00000440240 XKR4Q5GH76 650 aa22.76■■□□□ 1.23
Retrieved 100 of 20,778 RNA–protein pairs in 33.9 ms