RNA–Protein interactions for RNA: ENST00000432306.5

VTI1A-202, Transcript of vesicle transport through interaction with t-SNAREs 1A, humanhuman

TSL 1 (best) BASIC

Gene VTI1A, Length 1,738 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VTI1A-202ENST00000432306 PDE1CQ14123 709 aaPredicted RBP8.66□□□□□ -1.02
VTI1A-202ENST00000432306 INF2Q27J81 1249 aa8.66□□□□□ -1.02
VTI1A-202ENST00000432306 TMEM119Q4V9L6 283 aa8.66□□□□□ -1.02
VTI1A-202ENST00000432306 TDRD12Q587J7 1177 aaKnown RBP8.66□□□□□ -1.02
VTI1A-202ENST00000432306 WDR45BQ5MNZ6 344 aa8.66□□□□□ -1.02
VTI1A-202ENST00000432306 NXNQ6DKJ4 435 aa8.66□□□□□ -1.02
VTI1A-202ENST00000432306 RGMBQ6NW40 437 aa8.66□□□□□ -1.02
VTI1A-202ENST00000432306 CFAP161Q6P656 301 aa8.66□□□□□ -1.02
VTI1A-202ENST00000432306 CTU1Q7Z7A3 348 aaKnown RBP8.66□□□□□ -1.02
VTI1A-202ENST00000432306 CPLX4Q7Z7G2 160 aa8.66□□□□□ -1.02
VTI1A-202ENST00000432306 RASSF3Q86WH2 238 aa8.66□□□□□ -1.02
VTI1A-202ENST00000432306 SYCE1Q8N0S2 351 aa8.66□□□□□ -1.02
VTI1A-202ENST00000432306 ANKRD13CQ8N6S4 541 aa8.66□□□□□ -1.02
VTI1A-202ENST00000432306 CCDC63Q8NA47 563 aa8.66□□□□□ -1.02
VTI1A-202ENST00000432306 CHAC2Q8WUX2 184 aa8.66□□□□□ -1.02
VTI1A-202ENST00000432306 LMBR1Q8WVP7 490 aa8.66□□□□□ -1.02
VTI1A-202ENST00000432306 TBC1D5Q92609 795 aa8.66□□□□□ -1.02
VTI1A-202ENST00000432306 LARP4BQ92615 738 aaKnown RBP8.66□□□□□ -1.02
VTI1A-202ENST00000432306 MAGOHBQ96A72 148 aaKnown RBP8.66□□□□□ -1.02
VTI1A-202ENST00000432306 CALML4Q96GE6 196 aa8.66□□□□□ -1.02
VTI1A-202ENST00000432306 HES6Q96HZ4 224 aa8.66□□□□□ -1.02
VTI1A-202ENST00000432306 MKNK1Q9BUB5 465 aa8.66□□□□□ -1.02
VTI1A-202ENST00000432306 CCDC113Q9H0I3 377 aa8.66□□□□□ -1.02
VTI1A-202ENST00000432306 EPB41L4BQ9H329 900 aa8.66□□□□□ -1.02
VTI1A-202ENST00000432306 SLTMQ9NWH9 1034 aaKnown RBP eCLIP8.66□□□□□ -1.02
VTI1A-202ENST00000432306 MAD2L2Q9UI95 211 aa8.66□□□□□ -1.02
VTI1A-202ENST00000432306 TMCC3Q9ULS5 477 aa8.66□□□□□ -1.02
VTI1A-202ENST00000432306 ZNRF3Q9ULT6 936 aa8.66□□□□□ -1.02
VTI1A-202ENST00000432306 CORO1CQ9ULV4 474 aaPredicted RBP8.66□□□□□ -1.02
VTI1A-202ENST00000432306 AK5Q9Y6K8 562 aa8.66□□□□□ -1.02
VTI1A-202ENST00000432306 LAMB1P07942 1786 aa8.65□□□□□ -1.02
VTI1A-202ENST00000432306 LAMB2P55268 1798 aa8.65□□□□□ -1.02
VTI1A-202ENST00000432306 GOLGA6L10A0A0M3HER8 536 aa8.65□□□□□ -1.03
VTI1A-202ENST00000432306 KLHL33A6NCF5 533 aa8.65□□□□□ -1.03
VTI1A-202ENST00000432306 FAM187AA6NFU0 413 aa8.65□□□□□ -1.03
VTI1A-202ENST00000432306 CCDC169A6NNP5 214 aa8.65□□□□□ -1.03
VTI1A-202ENST00000432306 O00370 1275 aa8.65□□□□□ -1.03
VTI1A-202ENST00000432306 IGHA2P01877 340 aa8.65□□□□□ -1.03
VTI1A-202ENST00000432306 FBXO45P0C2W1 286 aa8.65□□□□□ -1.03
VTI1A-202ENST00000432306 EPB42P16452 691 aa8.65□□□□□ -1.03
VTI1A-202ENST00000432306 PAX7P23759 505 aa8.65□□□□□ -1.03
VTI1A-202ENST00000432306 PIK3CAP42336 1068 aa8.65□□□□□ -1.03
VTI1A-202ENST00000432306 GMPSP49915 693 aaPredicted RBP8.65□□□□□ -1.03
VTI1A-202ENST00000432306 COPS2P61201 443 aa8.65□□□□□ -1.03
VTI1A-202ENST00000432306 CXCL9Q07325 125 aa8.65□□□□□ -1.03
VTI1A-202ENST00000432306 TNIP1Q15025 636 aa8.65□□□□□ -1.03
VTI1A-202ENST00000432306 NONOQ15233 471 aaKnown RBP eCLIP8.65□□□□□ -1.03
VTI1A-202ENST00000432306 SLC35G1Q2M3R5 365 aa8.65□□□□□ -1.03
VTI1A-202ENST00000432306 EDRF1Q3B7T1 1238 aa8.65□□□□□ -1.03
VTI1A-202ENST00000432306 MFSD5Q6N075 450 aa8.65□□□□□ -1.03
VTI1A-202ENST00000432306 HIBCHQ6NVY1 386 aaPredicted RBP8.65□□□□□ -1.03
VTI1A-202ENST00000432306 TRPM8Q7Z2W7 1104 aa8.65□□□□□ -1.03
VTI1A-202ENST00000432306 IRF2BP2Q7Z5L9 587 aa8.65□□□□□ -1.03
VTI1A-202ENST00000432306 NEK8Q86SG6 692 aa8.65□□□□□ -1.03
VTI1A-202ENST00000432306 TCEAL8Q8IYN2 117 aa8.65□□□□□ -1.03
VTI1A-202ENST00000432306 METTL13Q8N6R0 699 aa8.65□□□□□ -1.03
VTI1A-202ENST00000432306 ARMC2Q8NEN0 867 aa8.65□□□□□ -1.03
VTI1A-202ENST00000432306 TPCN2Q8NHX9 752 aa8.65□□□□□ -1.03
VTI1A-202ENST00000432306 ATP8B4Q8TF62 1192 aa8.65□□□□□ -1.03
VTI1A-202ENST00000432306 ZNF384Q8TF68 577 aa8.65□□□□□ -1.03
VTI1A-202ENST00000432306 ALKBH8Q96BT7 664 aaKnown RBP8.65□□□□□ -1.03
VTI1A-202ENST00000432306 PNMA5Q96PV4 448 aa8.65□□□□□ -1.03
VTI1A-202ENST00000432306 RAB17Q9H0T7 212 aa8.65□□□□□ -1.03
VTI1A-202ENST00000432306 PABPC3Q9H361 631 aaKnown RBP8.65□□□□□ -1.03
VTI1A-202ENST00000432306 CENPHQ9H3R5 247 aa8.65□□□□□ -1.03
VTI1A-202ENST00000432306 DCP1AQ9NPI6 582 aaPredicted RBP8.65□□□□□ -1.03
VTI1A-202ENST00000432306 ZDHHC18Q9NUE0 388 aa8.65□□□□□ -1.03
VTI1A-202ENST00000432306 NOP53Q9NZM5 478 aaKnown RBP8.65□□□□□ -1.03
VTI1A-202ENST00000432306 NOC2LQ9Y3T9 749 aaKnown RBP8.65□□□□□ -1.03
VTI1A-202ENST00000432306 PHF20L1A8MW92 1017 aa8.64□□□□□ -1.03
VTI1A-202ENST00000432306 SMIM22K7EJ46 135 aa8.64□□□□□ -1.03
VTI1A-202ENST00000432306 KCNK3O14649 394 aa8.64□□□□□ -1.03
VTI1A-202ENST00000432306 OPLAHO14841 1288 aa8.64□□□□□ -1.03
VTI1A-202ENST00000432306 CYTH3O43739 400 aa8.64□□□□□ -1.03
VTI1A-202ENST00000432306 CTNND1O60716 968 aaKnown RBP8.64□□□□□ -1.03
VTI1A-202ENST00000432306 SMNDC1O75940 238 aaKnown RBP eCLIP8.64□□□□□ -1.03
VTI1A-202ENST00000432306 GNA11P29992 359 aa8.64□□□□□ -1.03
VTI1A-202ENST00000432306 HALP42357 657 aa8.64□□□□□ -1.03
VTI1A-202ENST00000432306 PTENP60484 403 aa8.64□□□□□ -1.03
VTI1A-202ENST00000432306 KLHL30Q0D2K2 578 aa8.64□□□□□ -1.03
VTI1A-202ENST00000432306 DHX34Q14147 1143 aaKnown RBP8.64□□□□□ -1.03
VTI1A-202ENST00000432306 TCEA2Q15560 299 aa8.64□□□□□ -1.03
VTI1A-202ENST00000432306 AOC3Q16853 763 aa8.64□□□□□ -1.03
VTI1A-202ENST00000432306 KRT71Q3SY84 523 aa8.64□□□□□ -1.03
VTI1A-202ENST00000432306 DUPD1Q68J44 220 aa8.64□□□□□ -1.03
VTI1A-202ENST00000432306 BZW1Q7L1Q6 419 aaKnown RBP8.64□□□□□ -1.03
VTI1A-202ENST00000432306 KIAA0825Q8IV33 1275 aa8.64□□□□□ -1.03
VTI1A-202ENST00000432306 C2orf69Q8N8R5 385 aa8.64□□□□□ -1.03
VTI1A-202ENST00000432306 OR2W6PQ8NHA6 318 aa8.64□□□□□ -1.03
VTI1A-202ENST00000432306 ZNF483Q8TF39 744 aaPredicted RBP8.64□□□□□ -1.03
VTI1A-202ENST00000432306 NSMCE1Q8WV22 266 aa8.64□□□□□ -1.03
VTI1A-202ENST00000432306 RAD54LQ92698 747 aa8.64□□□□□ -1.03
VTI1A-202ENST00000432306 SCLT1Q96NL6 688 aa8.64□□□□□ -1.03
VTI1A-202ENST00000432306 SPAG5Q96R06 1193 aa8.64□□□□□ -1.03
VTI1A-202ENST00000432306 ZIC5Q96T25 663 aa8.64□□□□□ -1.03
VTI1A-202ENST00000432306 SLC39A2Q9NP94 309 aa8.64□□□□□ -1.03
VTI1A-202ENST00000432306 ARHGEF3Q9NR81 526 aa8.64□□□□□ -1.03
VTI1A-202ENST00000432306 SLC5A4Q9NY91 659 aa8.64□□□□□ -1.03
VTI1A-202ENST00000432306 NAGPAQ9UK23 515 aa8.64□□□□□ -1.03
VTI1A-202ENST00000432306 UTP11Q9Y3A2 253 aaKnown RBP8.64□□□□□ -1.03
Retrieved 100 of 20,778 RNA–protein pairs in 44.6 ms