RNA–Protein interactions for RNA: ENST00000418882.2

HMGB1P49-201, Transcript of high mobility group box 1 pseudogene 49, humanhuman

BASIC

Gene HMGB1P49, Length 569 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB1P49-201ENST00000418882 MYBBP1AQ9BQG0 1328 aaKnown RBP5.96□□□□□ -1.46
HMGB1P49-201ENST00000418882 GOLGA6L6A8MZA4 724 aa5.95□□□□□ -1.46
HMGB1P49-201ENST00000418882 ZNF185O15231 689 aa5.95□□□□□ -1.46
HMGB1P49-201ENST00000418882 NCLP19338 710 aaKnown RBP5.95□□□□□ -1.46
HMGB1P49-201ENST00000418882 RECQLP46063 649 aaPredicted RBP5.95□□□□□ -1.46
HMGB1P49-201ENST00000418882 ADKP55263 362 aaKnown RBP5.95□□□□□ -1.46
HMGB1P49-201ENST00000418882 RAP2BP61225 183 aa5.95□□□□□ -1.46
HMGB1P49-201ENST00000418882 PTH1RQ03431 593 aa5.95□□□□□ -1.46
HMGB1P49-201ENST00000418882 UAP1L1Q3KQV9 507 aa5.95□□□□□ -1.46
HMGB1P49-201ENST00000418882 RABL3Q5HYI8 236 aa5.95□□□□□ -1.46
HMGB1P49-201ENST00000418882 TMEM240Q5SV17 173 aa5.95□□□□□ -1.46
HMGB1P49-201ENST00000418882 FAM180AQ6UWF9 173 aa5.95□□□□□ -1.46
HMGB1P49-201ENST00000418882 DBX2Q6ZNG2 339 aa5.95□□□□□ -1.46
HMGB1P49-201ENST00000418882 ZBTB46Q86UZ6 589 aa5.95□□□□□ -1.46
HMGB1P49-201ENST00000418882 CPA6Q8N4T0 437 aa5.95□□□□□ -1.46
HMGB1P49-201ENST00000418882 TFAP2CQ92754 450 aa5.95□□□□□ -1.46
HMGB1P49-201ENST00000418882 NDC1Q9BTX1 674 aa5.95□□□□□ -1.46
HMGB1P49-201ENST00000418882 FBXO34Q9NWN3 711 aa5.95□□□□□ -1.46
HMGB1P49-201ENST00000418882 SORCS3Q9UPU3 1222 aa5.95□□□□□ -1.46
HMGB1P49-201ENST00000418882 LUC7L2Q9Y383 392 aaKnown RBP5.95□□□□□ -1.46
HMGB1P49-201ENST00000418882 CHST2Q9Y4C5 530 aa5.95□□□□□ -1.46
HMGB1P49-201ENST00000418882 SPEF1Q9Y4P9 236 aa5.95□□□□□ -1.46
HMGB1P49-201ENST00000418882 NPIPB8E9PQR5 432 aa5.94□□□□□ -1.46
HMGB1P49-201ENST00000418882 PJA2O43164 708 aa5.94□□□□□ -1.46
HMGB1P49-201ENST00000418882 PRSS23O95084 383 aa5.94□□□□□ -1.46
HMGB1P49-201ENST00000418882 DDCP20711 480 aa5.94□□□□□ -1.46
HMGB1P49-201ENST00000418882 SLC6A2P23975 617 aa5.94□□□□□ -1.46
HMGB1P49-201ENST00000418882 CCND1P24385 295 aa5.94□□□□□ -1.46
HMGB1P49-201ENST00000418882 CHN2P52757 468 aa5.94□□□□□ -1.46
HMGB1P49-201ENST00000418882 SLC16A1P53985 500 aa5.94□□□□□ -1.46
HMGB1P49-201ENST00000418882 CLRN1P58418 232 aa5.94□□□□□ -1.46
HMGB1P49-201ENST00000418882 DSC2Q02487 901 aa5.94□□□□□ -1.46
HMGB1P49-201ENST00000418882 NHLH2Q02577 135 aa5.94□□□□□ -1.46
HMGB1P49-201ENST00000418882 OTUD7BQ6GQQ9 843 aa5.94□□□□□ -1.46
HMGB1P49-201ENST00000418882 DRICH1Q6PGQ1 229 aaPredicted RBP5.94□□□□□ -1.46
HMGB1P49-201ENST00000418882 IFI44Q8TCB0 444 aa5.94□□□□□ -1.46
HMGB1P49-201ENST00000418882 CASKIN2Q8WXE0 1202 aa5.94□□□□□ -1.46
HMGB1P49-201ENST00000418882 RTFDC1Q9BY42 306 aaPredicted RBP5.94□□□□□ -1.46
HMGB1P49-201ENST00000418882 SLC2A4RGQ9NR83 387 aa5.94□□□□□ -1.46
HMGB1P49-201ENST00000418882 AURKAIP1Q9NWT8 199 aaPredicted RBP5.94□□□□□ -1.46
HMGB1P49-201ENST00000418882 GPRC5BQ9NZH0 403 aa5.94□□□□□ -1.46
HMGB1P49-201ENST00000418882 CCDC78A2IDD5 438 aa5.93□□□□□ -1.46
HMGB1P49-201ENST00000418882 DRGXA6NNA5 263 aa5.93□□□□□ -1.46
HMGB1P49-201ENST00000418882 ABLIM3O94929 683 aa5.93□□□□□ -1.46
HMGB1P49-201ENST00000418882 SNUPNO95149 360 aaKnown RBP5.93□□□□□ -1.46
HMGB1P49-201ENST00000418882 SNRPA1P09661 255 aaKnown RBP5.93□□□□□ -1.46
HMGB1P49-201ENST00000418882 C6P13671 934 aa5.93□□□□□ -1.46
HMGB1P49-201ENST00000418882 IL2RBP14784 551 aa5.93□□□□□ -1.46
HMGB1P49-201ENST00000418882 ZSCAN20P17040 1043 aaPredicted RBP5.93□□□□□ -1.46
HMGB1P49-201ENST00000418882 SLC6A4P31645 630 aa5.93□□□□□ -1.46
HMGB1P49-201ENST00000418882 RNASE9P60153 205 aaKnown RBP5.93□□□□□ -1.46
HMGB1P49-201ENST00000418882 PLEKHG6Q3KR16 790 aa5.93□□□□□ -1.46
HMGB1P49-201ENST00000418882 GJC2Q5T442 439 aaPredicted RBP5.93□□□□□ -1.46
HMGB1P49-201ENST00000418882 ATXN7L2Q5T6C5 722 aaPredicted RBP5.93□□□□□ -1.46
HMGB1P49-201ENST00000418882 FAM102AQ5T9C2 384 aaPredicted RBP5.93□□□□□ -1.46
HMGB1P49-201ENST00000418882 EFCAB12Q6NXP0 572 aa5.93□□□□□ -1.46
HMGB1P49-201ENST00000418882 MIGA2Q7L4E1 593 aa5.93□□□□□ -1.46
HMGB1P49-201ENST00000418882 UBE3BQ7Z3V4 1068 aa5.93□□□□□ -1.46
HMGB1P49-201ENST00000418882 CPT1CQ8TCG5 803 aa5.93□□□□□ -1.46
HMGB1P49-201ENST00000418882 HDAC10Q969S8 669 aa5.93□□□□□ -1.46
HMGB1P49-201ENST00000418882 TMX3Q96JJ7 454 aa5.93□□□□□ -1.46
HMGB1P49-201ENST00000418882 MRGPRX4Q96LA9 322 aa5.93□□□□□ -1.46
HMGB1P49-201ENST00000418882 RHOBTB2Q9BYZ6 727 aa5.93□□□□□ -1.46
HMGB1P49-201ENST00000418882 AASDHPPTQ9NRN7 309 aa5.93□□□□□ -1.46
HMGB1P49-201ENST00000418882 TMEM140Q9NV12 185 aa5.93□□□□□ -1.46
HMGB1P49-201ENST00000418882 IP6K2Q9UHH9 426 aa5.93□□□□□ -1.46
HMGB1P49-201ENST00000418882 LRRC14BA6NHZ5 514 aa5.92□□□□□ -1.46
HMGB1P49-201ENST00000418882 NARSO43776 548 aaKnown RBP5.92□□□□□ -1.46
HMGB1P49-201ENST00000418882 SCAF4O95104 1147 aaKnown RBP5.92□□□□□ -1.46
HMGB1P49-201ENST00000418882 SBK3P0C264 359 aa5.92□□□□□ -1.46
HMGB1P49-201ENST00000418882 ATP5JP18859 108 aa5.92□□□□□ -1.46
HMGB1P49-201ENST00000418882 TACR2P21452 398 aa5.92□□□□□ -1.46
HMGB1P49-201ENST00000418882 ZNF280AP59817 542 aaPredicted RBP5.92□□□□□ -1.46
HMGB1P49-201ENST00000418882 ZXDAP98168 799 aa5.92□□□□□ -1.46
HMGB1P49-201ENST00000418882 CDC42EP1Q00587 391 aa5.92□□□□□ -1.46
HMGB1P49-201ENST00000418882 LSM12Q3MHD2 195 aaKnown RBP5.92□□□□□ -1.46
HMGB1P49-201ENST00000418882 PDCD4Q53EL6 469 aaKnown RBP5.92□□□□□ -1.46
HMGB1P49-201ENST00000418882 ZNF529Q6P280 563 aa5.92□□□□□ -1.46
HMGB1P49-201ENST00000418882 SEM1Q6ZVN7 128 aa5.92□□□□□ -1.46
HMGB1P49-201ENST00000418882 CATIPQ7Z7H3 387 aa5.92□□□□□ -1.46
HMGB1P49-201ENST00000418882 PLXDC1Q8IUK5 500 aa5.92□□□□□ -1.46
HMGB1P49-201ENST00000418882 CYFIP2Q96F07 1278 aa5.92□□□□□ -1.46
HMGB1P49-201ENST00000418882 PHACTR3Q96KR7 559 aa5.92□□□□□ -1.46
HMGB1P49-201ENST00000418882 KRTAP4-11Q9BYQ6 195 aa5.92□□□□□ -1.46
HMGB1P49-201ENST00000418882 SCAND2PQ9GZW5 306 aaPredicted RBP5.92□□□□□ -1.46
HMGB1P49-201ENST00000418882 CSRNP2Q9H175 543 aa5.92□□□□□ -1.46
HMGB1P49-201ENST00000418882 MANSC1Q9H8J5 431 aa5.92□□□□□ -1.46
HMGB1P49-201ENST00000418882 PARPBPQ9NWS1 579 aa5.92□□□□□ -1.46
HMGB1P49-201ENST00000418882 MOCS1Q9NZB8 636 aa5.92□□□□□ -1.46
HMGB1P49-201ENST00000418882 POGKQ9P215 609 aa5.92□□□□□ -1.46
HMGB1P49-201ENST00000418882 SAP30BPQ9UHR5 308 aaKnown RBP5.92□□□□□ -1.46
HMGB1P49-201ENST00000418882 EIF2B4Q9UI10 523 aaKnown RBP5.92□□□□□ -1.46
HMGB1P49-201ENST00000418882 TCRBV7S2A1N4TA0A589 114 aa5.91□□□□□ -1.46
HMGB1P49-201ENST00000418882 TRIM24O15164 1050 aa5.91□□□□□ -1.46
HMGB1P49-201ENST00000418882 AKAP10O43572 662 aa5.91□□□□□ -1.46
HMGB1P49-201ENST00000418882 RPS6KA4O75676 772 aa5.91□□□□□ -1.46
HMGB1P49-201ENST00000418882 RAB27AP51159 221 aa5.91□□□□□ -1.46
HMGB1P49-201ENST00000418882 TUBA3CQ13748 450 aa5.91□□□□□ -1.46
HMGB1P49-201ENST00000418882 RRP12Q5JTH9 1297 aaKnown RBP5.91□□□□□ -1.46
HMGB1P49-201ENST00000418882 TUBA3EQ6PEY2 450 aa5.91□□□□□ -1.46
Retrieved 100 of 20,778 RNA–protein pairs in 13.6 ms