RNA–Protein interactions for RNA: ENST00000409472.5

SCAMP4-202, Transcript of secretory carrier membrane protein 4, humanhuman

TSL 2 BASIC

Gene SCAMP4, Length 2,394 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCAMP4-202ENST00000409472 TDRD10Q5VZ19 366 aaKnown RBP16.33■□□□□ 0.2
SCAMP4-202ENST00000409472 LLGL2Q6P1M3 1020 aa16.33■□□□□ 0.2
SCAMP4-202ENST00000409472 C15orf39Q6ZRI6 1047 aa16.33■□□□□ 0.2
SCAMP4-202ENST00000409472 ZBTB10Q96DT7 871 aa16.33■□□□□ 0.2
SCAMP4-202ENST00000409472 RNPC3Q96LT9 517 aaKnown RBP16.33■□□□□ 0.2
SCAMP4-202ENST00000409472 ASCC2Q9H1I8 757 aaPredicted RBP16.33■□□□□ 0.2
SCAMP4-202ENST00000409472 RNF181Q9P0P0 153 aa16.33■□□□□ 0.2
SCAMP4-202ENST00000409472 ALG6Q9Y672 507 aa16.33■□□□□ 0.2
SCAMP4-202ENST00000409472 IGKV6D-21A0A0A0MT36 114 aa16.32■□□□□ 0.2
SCAMP4-202ENST00000409472 TTI1O43156 1089 aa16.32■□□□□ 0.2
SCAMP4-202ENST00000409472 HARSP12081 509 aaKnown RBP16.32■□□□□ 0.2
SCAMP4-202ENST00000409472 ARL2P36404 184 aa16.32■□□□□ 0.2
SCAMP4-202ENST00000409472 SATB1Q01826 763 aa16.32■□□□□ 0.2
SCAMP4-202ENST00000409472 C2CD6Q53TS8 623 aa16.32■□□□□ 0.2
SCAMP4-202ENST00000409472 SULF1Q8IWU6 871 aa16.32■□□□□ 0.2
SCAMP4-202ENST00000409472 ZIM3Q96PE6 472 aa16.32■□□□□ 0.2
SCAMP4-202ENST00000409472 FHDC1Q9C0D6 1143 aaPredicted RBP16.32■□□□□ 0.2
SCAMP4-202ENST00000409472 ADARB2Q9NS39 739 aaKnown RBP16.32■□□□□ 0.2
SCAMP4-202ENST00000409472 FBXO40Q9UH90 709 aa16.32■□□□□ 0.2
SCAMP4-202ENST00000409472 A0A0G2JLL6 359 aaPredicted RBP16.31■□□□□ 0.2
SCAMP4-202ENST00000409472 GRIN3BO60391 1043 aa16.31■□□□□ 0.2
SCAMP4-202ENST00000409472 GGPS1O95749 300 aa16.31■□□□□ 0.2
SCAMP4-202ENST00000409472 KRT5P13647 590 aa16.31■□□□□ 0.2
SCAMP4-202ENST00000409472 TCF7P36402 384 aaPredicted RBP16.31■□□□□ 0.2
SCAMP4-202ENST00000409472 CAPSQ13938 189 aa16.31■□□□□ 0.2
SCAMP4-202ENST00000409472 MESDQ14696 234 aa16.31■□□□□ 0.2
SCAMP4-202ENST00000409472 PRRT2Q7Z6L0 340 aaPredicted RBP16.31■□□□□ 0.2
SCAMP4-202ENST00000409472 FMNL3Q8IVF7 1028 aa16.31■□□□□ 0.2
SCAMP4-202ENST00000409472 PIK3R5Q8WYR1 880 aa16.31■□□□□ 0.2
SCAMP4-202ENST00000409472 DCPSQ96C86 337 aaKnown RBP16.31■□□□□ 0.2
SCAMP4-202ENST00000409472 TRIM51Q9BSJ1 452 aa16.31■□□□□ 0.2
SCAMP4-202ENST00000409472 ZNF233A6NK53 670 aa16.31■□□□□ 0.2
SCAMP4-202ENST00000409472 EXTL3O43909 919 aa16.31■□□□□ 0.2
SCAMP4-202ENST00000409472 RTN2O75298 545 aa16.31■□□□□ 0.2
SCAMP4-202ENST00000409472 VNN1O95497 513 aa16.31■□□□□ 0.2
SCAMP4-202ENST00000409472 SSTR3P32745 418 aaPredicted RBP16.31■□□□□ 0.2
SCAMP4-202ENST00000409472 GPC5P78333 572 aa16.31■□□□□ 0.2
SCAMP4-202ENST00000409472 PAK2Q13177 524 aa16.31■□□□□ 0.2
SCAMP4-202ENST00000409472 Q3C1V9 767 aa16.31■□□□□ 0.2
SCAMP4-202ENST00000409472 PHLDB2Q86SQ0 1253 aa16.31■□□□□ 0.2
SCAMP4-202ENST00000409472 ZDHHC14Q8IZN3 488 aa16.31■□□□□ 0.2
SCAMP4-202ENST00000409472 DEPTORQ8TB45 409 aa16.31■□□□□ 0.2
SCAMP4-202ENST00000409472 PSPC1Q8WXF1 523 aaKnown RBP16.31■□□□□ 0.2
SCAMP4-202ENST00000409472 ARL8AQ96BM9 186 aa16.31■□□□□ 0.2
SCAMP4-202ENST00000409472 ZNF668Q96K58 619 aaPredicted RBP16.31■□□□□ 0.2
SCAMP4-202ENST00000409472 CALR3Q96L12 384 aaKnown RBP16.31■□□□□ 0.2
SCAMP4-202ENST00000409472 AGO2Q9UKV8 859 aaKnown RBP16.31■□□□□ 0.2
SCAMP4-202ENST00000409472 UMODL1Q5DID0 1318 aa16.31■□□□□ 0.2
SCAMP4-202ENST00000409472 KRT14P02533 472 aa16.3■□□□□ 0.2
SCAMP4-202ENST00000409472 CFHP08603 1231 aa16.3■□□□□ 0.2
SCAMP4-202ENST00000409472 COMTP21964 271 aa16.3■□□□□ 0.2
SCAMP4-202ENST00000409472 FLT3P36888 993 aa16.3■□□□□ 0.2
SCAMP4-202ENST00000409472 PDE6CP51160 858 aa16.3■□□□□ 0.2
SCAMP4-202ENST00000409472 CDR2Q01850 454 aa16.3■□□□□ 0.2
SCAMP4-202ENST00000409472 HSDL1Q3SXM5 330 aa16.3■□□□□ 0.2
SCAMP4-202ENST00000409472 TTMPQ5BVD1 217 aa16.3■□□□□ 0.2
SCAMP4-202ENST00000409472 RHOT2Q8IXI1 618 aa16.3■□□□□ 0.2
SCAMP4-202ENST00000409472 SLC7A3Q8WY07 619 aa16.3■□□□□ 0.2
SCAMP4-202ENST00000409472 TRIM7Q9C029 511 aa16.3■□□□□ 0.2
SCAMP4-202ENST00000409472 KCNG1Q9UIX4 513 aa16.3■□□□□ 0.2
SCAMP4-202ENST00000409472 HLA-DRAP01903 254 aa16.3■□□□□ 0.2
SCAMP4-202ENST00000409472 TNNI1P19237 187 aa16.3■□□□□ 0.2
SCAMP4-202ENST00000409472 POU5F1Q01860 360 aaKnown RBP16.3■□□□□ 0.2
SCAMP4-202ENST00000409472 TARBP2Q15633 366 aaKnown RBP16.3■□□□□ 0.2
SCAMP4-202ENST00000409472 CNPY4Q8N129 248 aa16.3■□□□□ 0.2
SCAMP4-202ENST00000409472 ZNF653Q96CK0 615 aa16.3■□□□□ 0.2
SCAMP4-202ENST00000409472 NUP85Q9BW27 656 aa16.3■□□□□ 0.2
SCAMP4-202ENST00000409472 APOBEC3GQ9HC16 384 aaKnown RBP16.3■□□□□ 0.2
SCAMP4-202ENST00000409472 SUFUQ9UMX1 484 aa16.3■□□□□ 0.2
SCAMP4-202ENST00000409472 TRPC6Q9Y210 931 aa16.3■□□□□ 0.2
SCAMP4-202ENST00000409472 BHMG1C9JSJ3 638 aaPredicted RBP16.29■□□□□ 0.2
SCAMP4-202ENST00000409472 DAPK3O43293 454 aa16.29■□□□□ 0.2
SCAMP4-202ENST00000409472 TNFSF9P41273 254 aa16.29■□□□□ 0.2
SCAMP4-202ENST00000409472 NAMPTP43490 491 aa16.29■□□□□ 0.2
SCAMP4-202ENST00000409472 HADHBP55084 474 aaKnown RBP16.29■□□□□ 0.2
SCAMP4-202ENST00000409472 STRN3Q13033 797 aa16.29■□□□□ 0.2
SCAMP4-202ENST00000409472 MOGSQ13724 837 aa16.29■□□□□ 0.2
SCAMP4-202ENST00000409472 HLTFQ14527 1009 aaKnown RBP eCLIP16.29■□□□□ 0.2
SCAMP4-202ENST00000409472 PSMD6Q15008 389 aa16.29■□□□□ 0.2
SCAMP4-202ENST00000409472 LLGL1Q15334 1064 aa16.29■□□□□ 0.2
SCAMP4-202ENST00000409472 ZACNQ401N2 412 aa16.29■□□□□ 0.2
SCAMP4-202ENST00000409472 C11orf63Q6NUN7 778 aa16.29■□□□□ 0.2
SCAMP4-202ENST00000409472 OR5B17Q8NGF7 314 aa16.29■□□□□ 0.2
SCAMP4-202ENST00000409472 COPS5Q92905 334 aa16.29■□□□□ 0.2
SCAMP4-202ENST00000409472 SH3GL2Q99962 352 aa16.29■□□□□ 0.2
SCAMP4-202ENST00000409472 NIFKQ9BYG3 293 aaKnown RBP16.29■□□□□ 0.2
SCAMP4-202ENST00000409472 STYXL1Q9Y6J8 313 aa16.29■□□□□ 0.2
SCAMP4-202ENST00000409472 TCRBV7S2A1N4TA0A589 114 aa16.29■□□□□ 0.2
SCAMP4-202ENST00000409472 K7ERI5 159 aa16.29■□□□□ 0.2
SCAMP4-202ENST00000409472 C4BPAP04003 597 aaKnown RBP16.29■□□□□ 0.2
SCAMP4-202ENST00000409472 GJB1P08034 283 aa16.29■□□□□ 0.2
SCAMP4-202ENST00000409472 GTF2H1P32780 548 aa16.29■□□□□ 0.2
SCAMP4-202ENST00000409472 STAT5BP51692 787 aa16.29■□□□□ 0.2
SCAMP4-202ENST00000409472 MKRN4PQ13434 485 aaPredicted RBP16.29■□□□□ 0.2
SCAMP4-202ENST00000409472 TADA2BQ86TJ2 420 aa16.29■□□□□ 0.2
SCAMP4-202ENST00000409472 FBXO16Q8IX29 292 aaPredicted RBP16.29■□□□□ 0.2
SCAMP4-202ENST00000409472 LRRC71Q8N4P6 559 aa16.29■□□□□ 0.2
SCAMP4-202ENST00000409472 ZNF564Q8TBZ8 553 aaPredicted RBP16.29■□□□□ 0.2
SCAMP4-202ENST00000409472 AFAP1L1Q8TED9 768 aa16.29■□□□□ 0.2
SCAMP4-202ENST00000409472 TRAPPC12Q8WVT3 735 aa16.29■□□□□ 0.2
Retrieved 100 of 20,778 RNA–protein pairs in 49.3 ms