RNA–Protein interactions for RNA: ENST00000409416.5

COL6A2-204, Transcript of collagen type VI alpha 2 chain, humanhuman

TSL 5 BASIC

Gene COL6A2, Length 3,430 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL6A2-204ENST00000409416 SAE1Q9UBE0 346 aaPredicted RBP14.31□□□□□ -0.12
COL6A2-204ENST00000409416 CCNE2O96020 404 aa14.3□□□□□ -0.12
COL6A2-204ENST00000409416 TRPC3Q13507 836 aa14.3□□□□□ -0.12
COL6A2-204ENST00000409416 TATDN1Q6P1N9 297 aa14.3□□□□□ -0.12
COL6A2-204ENST00000409416 PNMA8AQ86V59 439 aaPredicted RBP14.3□□□□□ -0.12
COL6A2-204ENST00000409416 MSTO1Q9BUK6 570 aa14.3□□□□□ -0.12
COL6A2-204ENST00000409416 IMPG2Q9BZV3 1241 aa14.3□□□□□ -0.12
COL6A2-204ENST00000409416 INTS9Q9NV88 658 aaKnown RBP14.3□□□□□ -0.12
COL6A2-204ENST00000409416 EPB41L3Q9Y2J2 1087 aaPredicted RBP14.3□□□□□ -0.12
COL6A2-204ENST00000409416 SUGT1Q9Y2Z0 365 aa14.3□□□□□ -0.12
COL6A2-204ENST00000409416 DDNO94850 711 aaPredicted RBP14.3□□□□□ -0.12
COL6A2-204ENST00000409416 NSFP46459 744 aaKnown RBP14.3□□□□□ -0.12
COL6A2-204ENST00000409416 PPP2R5DQ14738 602 aa14.3□□□□□ -0.12
COL6A2-204ENST00000409416 KCNT1Q5JUK3 1230 aa14.3□□□□□ -0.12
COL6A2-204ENST00000409416 ZNF772Q68DY9 489 aaPredicted RBP14.3□□□□□ -0.12
COL6A2-204ENST00000409416 FAM47EQ6ZV65 393 aa14.3□□□□□ -0.12
COL6A2-204ENST00000409416 RTKN2Q8IZC4 609 aa14.3□□□□□ -0.12
COL6A2-204ENST00000409416 GIMAP7Q8NHV1 300 aa14.3□□□□□ -0.12
COL6A2-204ENST00000409416 BSNDQ8WZ55 320 aa14.3□□□□□ -0.12
COL6A2-204ENST00000409416 TBC1D31Q96DN5 1066 aa14.3□□□□□ -0.12
COL6A2-204ENST00000409416 FAM49AQ9H0Q0 323 aaPredicted RBP14.3□□□□□ -0.12
COL6A2-204ENST00000409416 ZNF148Q9UQR1 794 aa14.3□□□□□ -0.12
COL6A2-204ENST00000409416 ZMYM2Q9UBW7 1377 aa14.3□□□□□ -0.12
COL6A2-204ENST00000409416 COL5A3P25940 1745 aaPredicted RBP14.3□□□□□ -0.12
COL6A2-204ENST00000409416 WDR64B1ANS9 1081 aa14.29□□□□□ -0.12
COL6A2-204ENST00000409416 H0YGN5 161 aa14.29□□□□□ -0.12
COL6A2-204ENST00000409416 SPRED3Q2MJR0 410 aa14.29□□□□□ -0.12
COL6A2-204ENST00000409416 BRDTQ58F21 947 aaPredicted RBP14.29□□□□□ -0.12
COL6A2-204ENST00000409416 DPY19L2P1Q6NXN4 242 aa14.29□□□□□ -0.12
COL6A2-204ENST00000409416 NOP9Q86U38 636 aaKnown RBP14.29□□□□□ -0.12
COL6A2-204ENST00000409416 DAW1Q8N136 415 aa14.29□□□□□ -0.12
COL6A2-204ENST00000409416 COPS5Q92905 334 aa14.29□□□□□ -0.12
COL6A2-204ENST00000409416 PRMT1Q99873 361 aaKnown RBP14.29□□□□□ -0.12
COL6A2-204ENST00000409416 OLFML3Q9NRN5 406 aa14.29□□□□□ -0.12
COL6A2-204ENST00000409416 BAIAP2L1Q9UHR4 511 aa14.29□□□□□ -0.12
COL6A2-204ENST00000409416 NFS1Q9Y697 457 aa14.29□□□□□ -0.12
COL6A2-204ENST00000409416 O00370 1275 aa14.29□□□□□ -0.12
COL6A2-204ENST00000409416 DDX3YO15523 660 aaKnown RBP14.29□□□□□ -0.12
COL6A2-204ENST00000409416 MYCP01106 439 aaPredicted RBP14.29□□□□□ -0.12
COL6A2-204ENST00000409416 SCARA3Q6AZY7 606 aa14.29□□□□□ -0.12
COL6A2-204ENST00000409416 FOXR2Q6PJQ5 311 aa14.29□□□□□ -0.12
COL6A2-204ENST00000409416 MOXD1Q6UVY6 613 aa14.29□□□□□ -0.12
COL6A2-204ENST00000409416 ZNF365Q70YC5 407 aa14.29□□□□□ -0.12
COL6A2-204ENST00000409416 SLC7A3Q8WY07 619 aa14.29□□□□□ -0.12
COL6A2-204ENST00000409416 AGTPBP1Q9UPW5 1226 aa14.29□□□□□ -0.12
COL6A2-204ENST00000409416 BTNL10A8MVZ5 291 aa14.29□□□□□ -0.12
COL6A2-204ENST00000409416 TRAPPC3O43617 180 aa14.29□□□□□ -0.12
COL6A2-204ENST00000409416 RPL21P46778 160 aaKnown RBP14.29□□□□□ -0.12
COL6A2-204ENST00000409416 HIRAP54198 1017 aaPredicted RBP14.29□□□□□ -0.12
COL6A2-204ENST00000409416 PTENP60484 403 aa14.29□□□□□ -0.12
COL6A2-204ENST00000409416 LY6KQ17RY6 165 aa14.29□□□□□ -0.12
COL6A2-204ENST00000409416 RPAINQ86UA6 219 aa14.29□□□□□ -0.12
COL6A2-204ENST00000409416 SPATS2Q86XZ4 545 aaKnown RBP14.29□□□□□ -0.12
COL6A2-204ENST00000409416 MCF2L2Q86YR7 1114 aa14.29□□□□□ -0.12
COL6A2-204ENST00000409416 CCDC60Q8IWA6 550 aaPredicted RBP14.29□□□□□ -0.12
COL6A2-204ENST00000409416 PDCD2LQ9BRP1 358 aa14.29□□□□□ -0.12
COL6A2-204ENST00000409416 KLC4Q9NSK0 619 aa14.29□□□□□ -0.12
COL6A2-204ENST00000409416 FBXO40Q9UH90 709 aa14.29□□□□□ -0.12
COL6A2-204ENST00000409416 MTUS1Q9ULD2 1270 aa14.29□□□□□ -0.12
COL6A2-204ENST00000409416 STXBP5LQ9Y2K9 1186 aa14.29□□□□□ -0.12
COL6A2-204ENST00000409416 CFHP08603 1231 aa14.28□□□□□ -0.12
COL6A2-204ENST00000409416 RRM1P23921 792 aa14.28□□□□□ -0.12
COL6A2-204ENST00000409416 RAP1GAPP47736 663 aa14.28□□□□□ -0.12
COL6A2-204ENST00000409416 GPC5P78333 572 aa14.28□□□□□ -0.12
COL6A2-204ENST00000409416 AMHR2Q16671 573 aa14.28□□□□□ -0.12
COL6A2-204ENST00000409416 FAM160B2Q86V87 743 aa14.28□□□□□ -0.12
COL6A2-204ENST00000409416 TCP11Q8WWU5 503 aa14.28□□□□□ -0.12
COL6A2-204ENST00000409416 MKL1Q969V6 931 aa14.28□□□□□ -0.12
COL6A2-204ENST00000409416 KLF6Q99612 283 aaPredicted RBP14.28□□□□□ -0.12
COL6A2-204ENST00000409416 SLC40A1Q9NP59 571 aa14.28□□□□□ -0.12
COL6A2-204ENST00000409416 SAMD15Q9P1V8 674 aa14.28□□□□□ -0.12
COL6A2-204ENST00000409416 PYGMP11217 842 aa14.28□□□□□ -0.12
COL6A2-204ENST00000409416 MAPK7Q13164 816 aa14.28□□□□□ -0.12
COL6A2-204ENST00000409416 DRP2Q13474 957 aa14.28□□□□□ -0.12
COL6A2-204ENST00000409416 SV2AQ7L0J3 742 aa14.28□□□□□ -0.12
COL6A2-204ENST00000409416 C7orf31Q8N865 590 aa14.28□□□□□ -0.12
COL6A2-204ENST00000409416 CEP120Q8N960 986 aa14.28□□□□□ -0.12
COL6A2-204ENST00000409416 TRPM4Q8TD43 1214 aa14.28□□□□□ -0.12
COL6A2-204ENST00000409416 HVCN1Q96D96 273 aa14.28□□□□□ -0.12
COL6A2-204ENST00000409416 MBOAT7Q96N66 472 aa14.28□□□□□ -0.12
COL6A2-204ENST00000409416 XPO6Q96QU8 1125 aaKnown RBP14.28□□□□□ -0.12
COL6A2-204ENST00000409416 VPS37BQ9H9H4 285 aa14.28□□□□□ -0.12
COL6A2-204ENST00000409416 TUFT1Q9NNX1 390 aa14.28□□□□□ -0.12
COL6A2-204ENST00000409416 PCDHA10Q9Y5I2 948 aa14.28□□□□□ -0.12
COL6A2-204ENST00000409416 LRRD1A4D1F6 860 aa14.28□□□□□ -0.12
COL6A2-204ENST00000409416 GOLGA8RI6L899 631 aa14.28□□□□□ -0.12
COL6A2-204ENST00000409416 CLTAP09496 248 aa14.28□□□□□ -0.12
COL6A2-204ENST00000409416 MFAP3P55082 362 aa14.28□□□□□ -0.12
COL6A2-204ENST00000409416 PSMC5P62195 406 aa14.28□□□□□ -0.12
COL6A2-204ENST00000409416 TNFAIP1Q13829 316 aa14.28□□□□□ -0.12
COL6A2-204ENST00000409416 PGM5Q15124 567 aa14.28□□□□□ -0.12
COL6A2-204ENST00000409416 SPDYE2Q495Y8 402 aa14.28□□□□□ -0.12
COL6A2-204ENST00000409416 SLFN11Q7Z7L1 901 aa14.28□□□□□ -0.12
COL6A2-204ENST00000409416 ZC3H3Q8IXZ2 948 aaKnown RBP14.28□□□□□ -0.12
COL6A2-204ENST00000409416 ANKS4BQ8N8V4 417 aa14.28□□□□□ -0.12
COL6A2-204ENST00000409416 RNF149Q8NC42 400 aa14.28□□□□□ -0.12
COL6A2-204ENST00000409416 CHMP6Q96FZ7 201 aa14.28□□□□□ -0.12
COL6A2-204ENST00000409416 SLC12A6Q9UHW9 1150 aa14.28□□□□□ -0.12
COL6A2-204ENST00000409416 STK38LQ9Y2H1 464 aa14.28□□□□□ -0.12
COL6A2-204ENST00000409416 SBF2Q86WG5 1849 aa14.28□□□□□ -0.12
Retrieved 100 of 20,778 RNA–protein pairs in 147.2 ms