RNA–Protein interactions for RNA: ENST00000402555.2

HMGB1P20-201, Transcript of high mobility group box 1 pseudogene 20, humanhuman

BASIC

Gene HMGB1P20, Length 677 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB1P20-201ENST00000402555 ZC3H11BA0A1B0GUI2 810 aaPredicted RBP6.35□□□□□ -1.39
HMGB1P20-201ENST00000402555 C2orf71A6NGG8 1288 aa6.35□□□□□ -1.39
HMGB1P20-201ENST00000402555 ACKR2O00590 384 aa6.35□□□□□ -1.39
HMGB1P20-201ENST00000402555 NRP1O14786 923 aa6.35□□□□□ -1.39
HMGB1P20-201ENST00000402555 N4BP3O15049 544 aa6.35□□□□□ -1.39
HMGB1P20-201ENST00000402555 SLC16A4O15374 487 aa6.35□□□□□ -1.39
HMGB1P20-201ENST00000402555 ZBTB24O43167 697 aaPredicted RBP6.35□□□□□ -1.39
HMGB1P20-201ENST00000402555 NCK2O43639 380 aa6.35□□□□□ -1.39
HMGB1P20-201ENST00000402555 CXCL14O95715 111 aa6.35□□□□□ -1.39
HMGB1P20-201ENST00000402555 PLA2G4BP0C869 781 aa6.35□□□□□ -1.39
HMGB1P20-201ENST00000402555 PDCP20941 246 aa6.35□□□□□ -1.39
HMGB1P20-201ENST00000402555 SSTR3P32745 418 aaPredicted RBP6.35□□□□□ -1.39
HMGB1P20-201ENST00000402555 UBA7P41226 1012 aa6.35□□□□□ -1.39
HMGB1P20-201ENST00000402555 OR1G1P47890 313 aa6.35□□□□□ -1.39
HMGB1P20-201ENST00000402555 NPTX2P47972 431 aa6.35□□□□□ -1.39
HMGB1P20-201ENST00000402555 SLC12A3P55017 1021 aa6.35□□□□□ -1.39
HMGB1P20-201ENST00000402555 SMC1AQ14683 1233 aaKnown RBP6.35□□□□□ -1.39
HMGB1P20-201ENST00000402555 PPP2R5AQ15172 486 aa6.35□□□□□ -1.39
HMGB1P20-201ENST00000402555 PTPAQ15257 358 aa6.35□□□□□ -1.39
HMGB1P20-201ENST00000402555 FAM187BQ17R55 369 aa6.35□□□□□ -1.39
HMGB1P20-201ENST00000402555 HYIQ5T013 277 aa6.35□□□□□ -1.39
HMGB1P20-201ENST00000402555 PDE12Q6L8Q7 609 aaKnown RBP6.35□□□□□ -1.39
HMGB1P20-201ENST00000402555 TAS1R3Q7RTX0 852 aa6.35□□□□□ -1.39
HMGB1P20-201ENST00000402555 TAS1R1Q7RTX1 841 aa6.35□□□□□ -1.39
HMGB1P20-201ENST00000402555 DDX53Q86TM3 631 aaKnown RBP6.35□□□□□ -1.39
HMGB1P20-201ENST00000402555 COLGALT2Q8IYK4 626 aa6.35□□□□□ -1.39
HMGB1P20-201ENST00000402555 MRPL43Q8N983 215 aaKnown RBP6.35□□□□□ -1.39
HMGB1P20-201ENST00000402555 SYT2Q8N9I0 419 aaPredicted RBP6.35□□□□□ -1.39
HMGB1P20-201ENST00000402555 GSTCDQ8NEC7 633 aa6.35□□□□□ -1.39
HMGB1P20-201ENST00000402555 FEZF2Q8TBJ5 459 aa6.35□□□□□ -1.39
HMGB1P20-201ENST00000402555 ZNF775Q96BV0 537 aaPredicted RBP6.35□□□□□ -1.39
HMGB1P20-201ENST00000402555 INTS4Q96HW7 963 aaKnown RBP6.35□□□□□ -1.39
HMGB1P20-201ENST00000402555 B3GALT6Q96L58 329 aa6.35□□□□□ -1.39
HMGB1P20-201ENST00000402555 PRIMPOLQ96LW4 560 aa6.35□□□□□ -1.39
HMGB1P20-201ENST00000402555 CLIC6Q96NY7 704 aa6.35□□□□□ -1.39
HMGB1P20-201ENST00000402555 TMEM175Q9BSA9 504 aa6.35□□□□□ -1.39
HMGB1P20-201ENST00000402555 TARS2Q9BW92 718 aaKnown RBP6.35□□□□□ -1.39
HMGB1P20-201ENST00000402555 ZBP1Q9H171 429 aa6.35□□□□□ -1.39
HMGB1P20-201ENST00000402555 EPHX3Q9H6B9 360 aa6.35□□□□□ -1.39
HMGB1P20-201ENST00000402555 NGRNQ9NPE2 291 aaKnown RBP6.35□□□□□ -1.39
HMGB1P20-201ENST00000402555 BLOC1S4Q9NUP1 217 aa6.35□□□□□ -1.39
HMGB1P20-201ENST00000402555 MARCH5Q9NX47 278 aa6.35□□□□□ -1.39
HMGB1P20-201ENST00000402555 KANSL3Q9P2N6 904 aa6.35□□□□□ -1.39
HMGB1P20-201ENST00000402555 FAN1Q9Y2M0 1017 aa6.35□□□□□ -1.39
HMGB1P20-201ENST00000402555 GDAQ9Y2T3 454 aa6.35□□□□□ -1.39
HMGB1P20-201ENST00000402555 GIT1Q9Y2X7 761 aa6.35□□□□□ -1.39
HMGB1P20-201ENST00000402555 USP15Q9Y4E8 981 aaPredicted RBP6.35□□□□□ -1.39
HMGB1P20-201ENST00000402555 PHLPP2Q6ZVD8 1323 aa6.34□□□□□ -1.39
HMGB1P20-201ENST00000402555 CASTOR2A6NHX0 329 aa6.34□□□□□ -1.39
HMGB1P20-201ENST00000402555 K7ERI5 159 aa6.34□□□□□ -1.39
HMGB1P20-201ENST00000402555 C2CD2LO14523 706 aa6.34□□□□□ -1.39
HMGB1P20-201ENST00000402555 PTGESO14684 152 aa6.34□□□□□ -1.39
HMGB1P20-201ENST00000402555 INPPL1O15357 1258 aa6.34□□□□□ -1.39
HMGB1P20-201ENST00000402555 ST8SIA5O15466 376 aa6.34□□□□□ -1.39
HMGB1P20-201ENST00000402555 STX6O43752 255 aa6.34□□□□□ -1.39
HMGB1P20-201ENST00000402555 CLASP2O75122 1294 aaKnown RBP6.34□□□□□ -1.39
HMGB1P20-201ENST00000402555 RECQL4O94761 1208 aa6.34□□□□□ -1.39
HMGB1P20-201ENST00000402555 BMP15O95972 392 aa6.34□□□□□ -1.39
HMGB1P20-201ENST00000402555 ALDH2P05091 517 aa6.34□□□□□ -1.39
HMGB1P20-201ENST00000402555 MYBP10242 640 aa6.34□□□□□ -1.39
HMGB1P20-201ENST00000402555 CTSAP10619 480 aa6.34□□□□□ -1.39
HMGB1P20-201ENST00000402555 HARSP12081 509 aaKnown RBP6.34□□□□□ -1.39
HMGB1P20-201ENST00000402555 EPCAMP16422 314 aa6.34□□□□□ -1.39
HMGB1P20-201ENST00000402555 PLCG1P19174 1290 aa6.34□□□□□ -1.39
HMGB1P20-201ENST00000402555 IGFBP6P24592 240 aaPredicted RBP6.34□□□□□ -1.39
HMGB1P20-201ENST00000402555 GUCY2CP25092 1073 aa6.34□□□□□ -1.39
HMGB1P20-201ENST00000402555 LONP1P36776 959 aaKnown RBP6.34□□□□□ -1.39
HMGB1P20-201ENST00000402555 EFNA5P52803 228 aa6.34□□□□□ -1.39
HMGB1P20-201ENST00000402555 OSTNP61366 133 aa6.34□□□□□ -1.39
HMGB1P20-201ENST00000402555 ZP2Q05996 745 aa6.34□□□□□ -1.39
HMGB1P20-201ENST00000402555 DSC1Q08554 894 aa6.34□□□□□ -1.39
HMGB1P20-201ENST00000402555 DMP1Q13316 513 aaPredicted RBP6.34□□□□□ -1.39
HMGB1P20-201ENST00000402555 SMAD4Q13485 552 aaKnown RBP6.34□□□□□ -1.39
HMGB1P20-201ENST00000402555 KCNC3Q14003 757 aa6.34□□□□□ -1.39
HMGB1P20-201ENST00000402555 MCM6Q14566 821 aa6.34□□□□□ -1.39
HMGB1P20-201ENST00000402555 PTPN14Q15678 1187 aa6.34□□□□□ -1.39
HMGB1P20-201ENST00000402555 SMAD2Q15796 467 aaKnown RBP6.34□□□□□ -1.39
HMGB1P20-201ENST00000402555 FOXD4L6Q3SYB3 417 aaPredicted RBP6.34□□□□□ -1.39
HMGB1P20-201ENST00000402555 ARSHQ5FYA8 562 aa6.34□□□□□ -1.39
HMGB1P20-201ENST00000402555 GLRA4Q5JXX5 417 aa6.34□□□□□ -1.39
HMGB1P20-201ENST00000402555 ATF7IP2Q5U623 682 aa6.34□□□□□ -1.39
HMGB1P20-201ENST00000402555 ANKRD54Q6NXT1 300 aa6.34□□□□□ -1.39
HMGB1P20-201ENST00000402555 KANK3Q6NY19 840 aa6.34□□□□□ -1.39
HMGB1P20-201ENST00000402555 SYCE2Q6PIF2 218 aa6.34□□□□□ -1.39
HMGB1P20-201ENST00000402555 FOXD4L3Q6VB84 417 aaPredicted RBP6.34□□□□□ -1.39
HMGB1P20-201ENST00000402555 ZBTB33Q86T24 672 aa6.34□□□□□ -1.39
HMGB1P20-201ENST00000402555 GPBP1Q86WP2 473 aa6.34□□□□□ -1.39
HMGB1P20-201ENST00000402555 HSCBQ8IWL3 235 aa6.34□□□□□ -1.39
HMGB1P20-201ENST00000402555 HACE1Q8IYU2 909 aa6.34□□□□□ -1.39
HMGB1P20-201ENST00000402555 GJD3Q8N144 294 aa6.34□□□□□ -1.39
HMGB1P20-201ENST00000402555 C12orf76Q8N812 135 aaPredicted RBP6.34□□□□□ -1.39
HMGB1P20-201ENST00000402555 CEP120Q8N960 986 aa6.34□□□□□ -1.39
HMGB1P20-201ENST00000402555 SMRP1Q8NCR6 262 aa6.34□□□□□ -1.39
HMGB1P20-201ENST00000402555 RASSF8Q8NHQ8 419 aa6.34□□□□□ -1.39
HMGB1P20-201ENST00000402555 HASPINQ8TF76 798 aa6.34□□□□□ -1.39
HMGB1P20-201ENST00000402555 SNX21Q969T3 373 aa6.34□□□□□ -1.39
HMGB1P20-201ENST00000402555 CALML4Q96GE6 196 aa6.34□□□□□ -1.39
HMGB1P20-201ENST00000402555 EPSTI1Q96J88 318 aa6.34□□□□□ -1.39
HMGB1P20-201ENST00000402555 ZBTB45Q96K62 511 aaPredicted RBP6.34□□□□□ -1.39
HMGB1P20-201ENST00000402555 DRC1Q96MC2 740 aa6.34□□□□□ -1.39
Retrieved 100 of 20,778 RNA–protein pairs in 74 ms