RNA–Protein interactions for RNA: ENST00000397276.6

PABPN1-202, Transcript of poly(A) binding protein nuclear 1, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene PABPN1, Length 2,768 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PABPN1-202ENST00000397276 EPN3Q9H201 632 aa25.48■■□□□ 1.67
PABPN1-202ENST00000397276 HOXC10Q9NYD6 342 aa25.48■■□□□ 1.67
PABPN1-202ENST00000397276 LRRIQ4A6NIV6 560 aa25.48■■□□□ 1.67
PABPN1-202ENST00000397276 SUPT20HL2P0C7V6 817 aa25.48■■□□□ 1.67
PABPN1-202ENST00000397276 PYGMP11217 842 aa25.48■■□□□ 1.67
PABPN1-202ENST00000397276 SSTR3P32745 418 aaPredicted RBP25.48■■□□□ 1.67
PABPN1-202ENST00000397276 EMC2Q15006 297 aa25.48■■□□□ 1.67
PABPN1-202ENST00000397276 SUPT20HL1Q3ZLR7 823 aa25.48■■□□□ 1.67
PABPN1-202ENST00000397276 APOBEC3FQ8IUX4 373 aaKnown RBP25.48■■□□□ 1.67
PABPN1-202ENST00000397276 CNKSR2Q8WXI2 1034 aa25.48■■□□□ 1.67
PABPN1-202ENST00000397276 TCRBV7S2A1N4TA0A589 114 aa25.47■■□□□ 1.67
PABPN1-202ENST00000397276 HADHBP55084 474 aaKnown RBP25.47■■□□□ 1.67
PABPN1-202ENST00000397276 NLRP11P59045 1033 aaKnown RBP25.47■■□□□ 1.67
PABPN1-202ENST00000397276 MKRN4PQ13434 485 aaPredicted RBP25.47■■□□□ 1.67
PABPN1-202ENST00000397276 XKR3Q5GH77 459 aa25.47■■□□□ 1.67
PABPN1-202ENST00000397276 USP37Q86T82 979 aa25.47■■□□□ 1.67
PABPN1-202ENST00000397276 ZDHHC14Q8IZN3 488 aa25.47■■□□□ 1.67
PABPN1-202ENST00000397276 FNBP1Q96RU3 617 aa25.47■■□□□ 1.67
PABPN1-202ENST00000397276 JPH2Q9BR39 696 aaPredicted RBP25.47■■□□□ 1.67
PABPN1-202ENST00000397276 CD248Q9HCU0 757 aa25.47■■□□□ 1.67
PABPN1-202ENST00000397276 ARHGAP28Q9P2N2 729 aa25.47■■□□□ 1.67
PABPN1-202ENST00000397276 SNX24Q9Y343 169 aa25.47■■□□□ 1.67
PABPN1-202ENST00000397276 KIAA1217Q5T5P2 1943 aa25.47■■□□□ 1.67
PABPN1-202ENST00000397276 BHMG1C9JSJ3 638 aaPredicted RBP25.47■■□□□ 1.67
PABPN1-202ENST00000397276 HIRAP54198 1017 aaPredicted RBP25.47■■□□□ 1.67
PABPN1-202ENST00000397276 PTGISQ16647 500 aa25.47■■□□□ 1.67
PABPN1-202ENST00000397276 SEZ6Q53EL9 994 aa25.47■■□□□ 1.67
PABPN1-202ENST00000397276 CCT8L2Q96SF2 557 aa25.47■■□□□ 1.67
PABPN1-202ENST00000397276 ATP8A1Q9Y2Q0 1164 aa25.47■■□□□ 1.67
PABPN1-202ENST00000397276 IFT88Q13099 833 aa25.46■■□□□ 1.67
PABPN1-202ENST00000397276 STXBP2Q15833 593 aa25.46■■□□□ 1.67
PABPN1-202ENST00000397276 EEPD1Q7L9B9 569 aa25.46■■□□□ 1.67
PABPN1-202ENST00000397276 DGCR8Q8WYQ5 773 aaKnown RBP eCLIP25.46■■□□□ 1.673e-6■■■□□ 17.7
PABPN1-202ENST00000397276 DDX1Q92499 740 aaKnown RBP25.46■■□□□ 1.67
PABPN1-202ENST00000397276 ATP6V1G3Q96LB4 118 aa25.46■■□□□ 1.67
PABPN1-202ENST00000397276 ZNF302Q9NR11 478 aa25.46■■□□□ 1.67
PABPN1-202ENST00000397276 ANKFY1Q9P2R3 1169 aa25.46■■□□□ 1.67
PABPN1-202ENST00000397276 AFG3L2Q9Y4W6 797 aa25.46■■□□□ 1.67
PABPN1-202ENST00000397276 NFASCO94856 1347 aa25.46■■□□□ 1.67
PABPN1-202ENST00000397276 GOLGA6L10A6NI86 522 aa25.46■■□□□ 1.67
PABPN1-202ENST00000397276 MIF4GDA9UHW6 222 aaKnown RBP25.46■■□□□ 1.67
PABPN1-202ENST00000397276 HARSP12081 509 aaKnown RBP25.46■■□□□ 1.67
PABPN1-202ENST00000397276 PEX5P50542 639 aa25.46■■□□□ 1.67
PABPN1-202ENST00000397276 BIRC3Q13489 604 aa25.46■■□□□ 1.67
PABPN1-202ENST00000397276 TREML2Q5T2D2 321 aa25.46■■□□□ 1.67
PABPN1-202ENST00000397276 LLGL2Q6P1M3 1020 aa25.46■■□□□ 1.67
PABPN1-202ENST00000397276 CCDC91Q7Z6B0 441 aa25.46■■□□□ 1.67
PABPN1-202ENST00000397276 CD302Q8IX05 232 aa25.46■■□□□ 1.67
PABPN1-202ENST00000397276 ASAP3Q8TDY4 903 aa25.46■■□□□ 1.67
PABPN1-202ENST00000397276 CPA5Q8WXQ8 436 aa25.46■■□□□ 1.67
PABPN1-202ENST00000397276 MAGOHBQ96A72 148 aaKnown RBP25.46■■□□□ 1.67
PABPN1-202ENST00000397276 MTFR1LQ9H019 292 aa25.46■■□□□ 1.67
PABPN1-202ENST00000397276 PPANQ9NQ55 473 aaKnown RBP25.46■■□□□ 1.67
PABPN1-202ENST00000397276 CNOT8Q9UFF9 292 aaKnown RBP25.46■■□□□ 1.67
PABPN1-202ENST00000397276 GARTP22102 1010 aa25.45■■□□□ 1.67
PABPN1-202ENST00000397276 STRN3Q13033 797 aa25.45■■□□□ 1.67
PABPN1-202ENST00000397276 ZBTB41Q5SVQ8 909 aa25.45■■□□□ 1.67
PABPN1-202ENST00000397276 EIF1ADQ8N9N8 165 aaKnown RBP25.45■■□□□ 1.67
PABPN1-202ENST00000397276 ATP8B4Q8TF62 1192 aa25.45■■□□□ 1.67
PABPN1-202ENST00000397276 FAM114A2Q9NRY5 505 aa25.45■■□□□ 1.67
PABPN1-202ENST00000397276 DOCK1Q14185 1865 aa25.45■■□□□ 1.66
PABPN1-202ENST00000397276 PLTPP55058 493 aa25.45■■□□□ 1.66
PABPN1-202ENST00000397276 TMC3Q7Z5M5 1100 aa25.45■■□□□ 1.66
PABPN1-202ENST00000397276 PRELID2Q8N945 189 aa25.45■■□□□ 1.66
PABPN1-202ENST00000397276 MYCBPAPQ8TBZ2 947 aa25.45■■□□□ 1.66
PABPN1-202ENST00000397276 ERP44Q9BS26 406 aa25.45■■□□□ 1.66
PABPN1-202ENST00000397276 TRIM7Q9C029 511 aa25.45■■□□□ 1.66
PABPN1-202ENST00000397276 HAPLN2Q9GZV7 340 aa25.45■■□□□ 1.66
PABPN1-202ENST00000397276 SYNGAP1Q96PV0 1343 aa25.45■■□□□ 1.66
PABPN1-202ENST00000397276 H0YGN5 161 aa25.44■■□□□ 1.66
PABPN1-202ENST00000397276 GRIN3BO60391 1043 aa25.44■■□□□ 1.66
PABPN1-202ENST00000397276 IBSPP21815 317 aaPredicted RBP25.44■■□□□ 1.66
PABPN1-202ENST00000397276 SEL1L2Q5TEA6 688 aa25.44■■□□□ 1.66
PABPN1-202ENST00000397276 NLRP14Q86W24 1093 aa25.44■■□□□ 1.66
PABPN1-202ENST00000397276 JAMLQ86YT9 394 aa25.44■■□□□ 1.66
PABPN1-202ENST00000397276 CABS1Q96KC9 395 aa25.44■■□□□ 1.66
PABPN1-202ENST00000397276 RAB17Q9H0T7 212 aa25.44■■□□□ 1.66
PABPN1-202ENST00000397276 LRRC4CQ9HCJ2 640 aa25.44■■□□□ 1.66
PABPN1-202ENST00000397276 C1orf112Q9NSG2 853 aa25.44■■□□□ 1.66
PABPN1-202ENST00000397276 AGO2Q9UKV8 859 aaKnown RBP25.44■■□□□ 1.66
PABPN1-202ENST00000397276 PTPN22Q9Y2R2 807 aa25.44■■□□□ 1.66
PABPN1-202ENST00000397276 NFS1Q9Y697 457 aa25.44■■□□□ 1.66
PABPN1-202ENST00000397276 PHIPQ8WWQ0 1821 aa25.44■■□□□ 1.66
PABPN1-202ENST00000397276 E7EVH7 732 aa25.44■■□□□ 1.66
PABPN1-202ENST00000397276 MYZAPP0CAP1 466 aa25.44■■□□□ 1.66
PABPN1-202ENST00000397276 FMO2Q99518 471 aa25.44■■□□□ 1.66
PABPN1-202ENST00000397276 PTPRJQ12913 1337 aa25.44■■□□□ 1.66
PABPN1-202ENST00000397276 FSBPO95073 299 aa25.44■■□□□ 1.66
PABPN1-202ENST00000397276 CYP1A2P05177 515 aa25.44■■□□□ 1.66
PABPN1-202ENST00000397276 GSCP56915 257 aaPredicted RBP25.44■■□□□ 1.66
PABPN1-202ENST00000397276 ZNF844Q08AG5 666 aa25.44■■□□□ 1.66
PABPN1-202ENST00000397276 ACAD10Q6JQN1 1059 aa25.44■■□□□ 1.66
PABPN1-202ENST00000397276 SEC14L1Q92503 715 aa25.44■■□□□ 1.66
PABPN1-202ENST00000397276 RPS6KC1Q96S38 1066 aa25.44■■□□□ 1.66
PABPN1-202ENST00000397276 TARS2Q9BW92 718 aaKnown RBP25.44■■□□□ 1.66
PABPN1-202ENST00000397276 TMBIM4Q9HC24 238 aa25.44■■□□□ 1.66
PABPN1-202ENST00000397276 GTF3C4Q9UKN8 822 aa25.44■■□□□ 1.66
PABPN1-202ENST00000397276 PCNTO95613 3336 aa25.44■■□□□ 1.66
PABPN1-202ENST00000397276 RLFQ13129 1914 aa25.43■■□□□ 1.66
PABPN1-202ENST00000397276 K7ERI5 159 aa25.43■■□□□ 1.66
Retrieved 100 of 20,778 RNA–protein pairs in 29.3 ms