RNA–Protein interactions for RNA: ENST00000394949.8

SIN3A-203, Transcript of SIN3 transcription regulator family member A, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SIN3A, Length 4,930 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SIN3A-203ENST00000394949 FEM1BQ9UK73 627 aa18.18■□□□□ 0.5
SIN3A-203ENST00000394949 CPSF3Q9UKF6 684 aaKnown RBP18.18■□□□□ 0.5
SIN3A-203ENST00000394949 ATF5Q9Y2D1 282 aaPredicted RBP18.18■□□□□ 0.5
SIN3A-203ENST00000394949 USP31Q70CQ4 1352 aa18.17■□□□□ 0.5
SIN3A-203ENST00000394949 SPHKAPQ2M3C7 1700 aa18.17■□□□□ 0.5
SIN3A-203ENST00000394949 IL10P22301 178 aa18.17■□□□□ 0.5
SIN3A-203ENST00000394949 BCAR1P56945 870 aa18.17■□□□□ 0.5
SIN3A-203ENST00000394949 KRT76Q01546 638 aa18.17■□□□□ 0.5
SIN3A-203ENST00000394949 TBCCQ15814 346 aa18.17■□□□□ 0.5
SIN3A-203ENST00000394949 TMEM259Q4ZIN3 620 aa18.17■□□□□ 0.5
SIN3A-203ENST00000394949 HP1BP3Q5SSJ5 553 aaPredicted RBP18.17■□□□□ 0.5
SIN3A-203ENST00000394949 DDX42Q86XP3 938 aaKnown RBP eCLIP18.17■□□□□ 0.5
SIN3A-203ENST00000394949 CMTM5Q96DZ9 223 aa18.17■□□□□ 0.5
SIN3A-203ENST00000394949 TDRD3Q9H7E2 651 aaKnown RBP18.17■□□□□ 0.5
SIN3A-203ENST00000394949 ATP8B3O60423 1300 aa18.17■□□□□ 0.5
SIN3A-203ENST00000394949 hCG_2014768A0A024R1R8 64 aa18.17■□□□□ 0.5
SIN3A-203ENST00000394949 PIK3R2O00459 728 aa18.17■□□□□ 0.5
SIN3A-203ENST00000394949 TYK2P29597 1187 aa18.17■□□□□ 0.5
SIN3A-203ENST00000394949 FNTAP49354 379 aa18.17■□□□□ 0.5
SIN3A-203ENST00000394949 CTCFP49711 727 aaPredicted RBP18.17■□□□□ 0.5
SIN3A-203ENST00000394949 NEK2P51955 445 aa18.17■□□□□ 0.5
SIN3A-203ENST00000394949 KIRREL3Q8IZU9 778 aa18.17■□□□□ 0.5
SIN3A-203ENST00000394949 TTC39CQ8N584 583 aa18.17■□□□□ 0.5
SIN3A-203ENST00000394949 TUFT1Q9NNX1 390 aa18.17■□□□□ 0.5
SIN3A-203ENST00000394949 STX18Q9P2W9 335 aaKnown RBP18.17■□□□□ 0.5
SIN3A-203ENST00000394949 NEU2Q9Y3R4 380 aa18.17■□□□□ 0.5
SIN3A-203ENST00000394949 HEY1Q9Y5J3 304 aa18.17■□□□□ 0.5
SIN3A-203ENST00000394949 ANP32DO95626 131 aa18.17■□□□□ 0.5
SIN3A-203ENST00000394949 SERPINB9P50453 376 aa18.17■□□□□ 0.5
SIN3A-203ENST00000394949 MYLK4Q86YV6 388 aaPredicted RBP18.17■□□□□ 0.5
SIN3A-203ENST00000394949 TEX2Q8IWB9 1127 aa18.17■□□□□ 0.5
SIN3A-203ENST00000394949 PBXIP1Q96AQ6 731 aa18.17■□□□□ 0.5
SIN3A-203ENST00000394949 BFARQ9NZS9 450 aa18.17■□□□□ 0.5
SIN3A-203ENST00000394949 SRGAP2CP0DJJ0 459 aa18.17■□□□□ 0.5
SIN3A-203ENST00000394949 ZNF18P17022 549 aa18.17■□□□□ 0.5
SIN3A-203ENST00000394949 FMO5P49326 533 aa18.17■□□□□ 0.5
SIN3A-203ENST00000394949 CENPCQ03188 943 aa18.17■□□□□ 0.5
SIN3A-203ENST00000394949 STXBP2Q15833 593 aa18.17■□□□□ 0.5
SIN3A-203ENST00000394949 P3H1Q32P28 736 aa18.17■□□□□ 0.5
SIN3A-203ENST00000394949 KIAA1841Q6NSI8 718 aa18.17■□□□□ 0.5
SIN3A-203ENST00000394949 RFX8Q6ZV50 586 aa18.17■□□□□ 0.5
SIN3A-203ENST00000394949 SCHIP1Q9P0W5 487 aaPredicted RBP18.17■□□□□ 0.5
SIN3A-203ENST00000394949 HPS5Q9UPZ3 1129 aa18.17■□□□□ 0.5
SIN3A-203ENST00000394949 E2F6O75461 281 aa18.16■□□□□ 0.5
SIN3A-203ENST00000394949 FDX1P10109 184 aa18.16■□□□□ 0.5
SIN3A-203ENST00000394949 PSMD7P51665 324 aa18.16■□□□□ 0.5
SIN3A-203ENST00000394949 AP3M2P53677 418 aa18.16■□□□□ 0.5
SIN3A-203ENST00000394949 CACNB3P54284 484 aa18.16■□□□□ 0.5
SIN3A-203ENST00000394949 SLC12A1Q13621 1099 aa18.16■□□□□ 0.5
SIN3A-203ENST00000394949 HEATR6Q6AI08 1181 aaKnown RBP18.16■□□□□ 0.5
SIN3A-203ENST00000394949 CPVLQ9H3G5 476 aa18.16■□□□□ 0.5
SIN3A-203ENST00000394949 OVOS2A0A0G2JMS6 1433 aa18.16■□□□□ 0.5
SIN3A-203ENST00000394949 OVOS2A0A0J9YW53 1432 aa18.16■□□□□ 0.5
SIN3A-203ENST00000394949 OVOS2Q6IE36 1432 aa18.16■□□□□ 0.5
SIN3A-203ENST00000394949 PI4K2BG5E9Z4 385 aa18.16■□□□□ 0.5
SIN3A-203ENST00000394949 CLDN3O15551 220 aa18.16■□□□□ 0.5
SIN3A-203ENST00000394949 SFNP31947 248 aa18.16■□□□□ 0.5
SIN3A-203ENST00000394949 YWHAHQ04917 246 aaPredicted RBP18.16■□□□□ 0.5
SIN3A-203ENST00000394949 STX3Q13277 289 aa18.16■□□□□ 0.5
SIN3A-203ENST00000394949 MTMR1Q13613 665 aa18.16■□□□□ 0.5
SIN3A-203ENST00000394949 Q3C1V9 767 aa18.16■□□□□ 0.5
SIN3A-203ENST00000394949 TRIM65Q6PJ69 517 aa18.16■□□□□ 0.5
SIN3A-203ENST00000394949 HIC2Q96JB3 615 aa18.16■□□□□ 0.5
SIN3A-203ENST00000394949 C9orf72Q96LT7 481 aa18.16■□□□□ 0.5
SIN3A-203ENST00000394949 IL1RAPL1Q9NZN1 696 aa18.16■□□□□ 0.5
SIN3A-203ENST00000394949 SLC16A4O15374 487 aa18.16■□□□□ 0.5
SIN3A-203ENST00000394949 SERPINB10P48595 397 aa18.16■□□□□ 0.5
SIN3A-203ENST00000394949 ALDH18A1P54886 795 aaKnown RBP18.16■□□□□ 0.5
SIN3A-203ENST00000394949 SYNE4Q8N205 404 aa18.16■□□□□ 0.5
SIN3A-203ENST00000394949 KCTD17Q8N5Z5 321 aa18.16■□□□□ 0.5
SIN3A-203ENST00000394949 MKNK1Q9BUB5 465 aa18.16■□□□□ 0.5
SIN3A-203ENST00000394949 MAGED2Q9UNF1 606 aaPredicted RBP18.16■□□□□ 0.5
SIN3A-203ENST00000394949 MYMKA6NI61 221 aa18.16■□□□□ 0.5
SIN3A-203ENST00000394949 KCNA4P22459 653 aa18.16■□□□□ 0.5
SIN3A-203ENST00000394949 XPAP23025 273 aaPredicted RBP18.16■□□□□ 0.5
SIN3A-203ENST00000394949 SERPINB3P29508 390 aa18.16■□□□□ 0.5
SIN3A-203ENST00000394949 SDC4P31431 198 aa18.16■□□□□ 0.5
SIN3A-203ENST00000394949 ZNF699Q32M78 642 aa18.16■□□□□ 0.5
SIN3A-203ENST00000394949 C4orf50Q6ZRC1 276 aa18.16■□□□□ 0.5
SIN3A-203ENST00000394949 NSUN6Q8TEA1 469 aaKnown RBP18.16■□□□□ 0.5
SIN3A-203ENST00000394949 NLRP4Q96MN2 994 aa18.16■□□□□ 0.5
SIN3A-203ENST00000394949 EIF2AK1Q9BQI3 630 aaKnown RBP18.16■□□□□ 0.5
SIN3A-203ENST00000394949 FAM213AQ9BRX8 229 aa18.16■□□□□ 0.5
SIN3A-203ENST00000394949 DENND3A2RUS2 1198 aa18.15■□□□□ 0.5
SIN3A-203ENST00000394949 QARSP47897 775 aaKnown RBP18.15■□□□□ 0.5
SIN3A-203ENST00000394949 AARSP49588 968 aaKnown RBP eCLIP18.15■□□□□ 0.5
SIN3A-203ENST00000394949 SLC27A3Q5K4L6 730 aa18.15■□□□□ 0.5
SIN3A-203ENST00000394949 B2RBV5 119 aa18.15■□□□□ 0.5
SIN3A-203ENST00000394949 MAGEA4P43358 317 aa18.15■□□□□ 0.5
SIN3A-203ENST00000394949 OSTNP61366 133 aa18.15■□□□□ 0.5
SIN3A-203ENST00000394949 PSMC1P62191 440 aaKnown RBP18.15■□□□□ 0.5
SIN3A-203ENST00000394949 ARHGEF1Q92888 912 aaKnown RBP18.15■□□□□ 0.5
SIN3A-203ENST00000394949 TIPINQ9BVW5 301 aa18.15■□□□□ 0.5
SIN3A-203ENST00000394949 USP17L10C9JJH3 530 aa18.15■□□□□ 0.5
SIN3A-203ENST00000394949 CDKAL1Q5VV42 579 aa18.15■□□□□ 0.5
SIN3A-203ENST00000394949 C4orf33Q8N1A6 199 aa18.15■□□□□ 0.5
SIN3A-203ENST00000394949 CCNYL1Q8N7R7 359 aa18.15■□□□□ 0.5
SIN3A-203ENST00000394949 HPS3Q969F9 1004 aa18.15■□□□□ 0.5
SIN3A-203ENST00000394949 MAP3K14Q99558 947 aa18.15■□□□□ 0.5
SIN3A-203ENST00000394949 ZFATQ9P243 1243 aa18.15■□□□□ 0.5
Retrieved 100 of 20,778 RNA–protein pairs in 167.9 ms