RNA–Protein interactions for RNA: ENST00000372484.7

CTSA-204, Transcript of cathepsin A, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CTSA, Length 2,149 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTSA-204ENST00000372484 MKRN4PQ13434 485 aaPredicted RBP19.24■□□□□ 0.67
CTSA-204ENST00000372484 GPR162Q16538 588 aa19.24■□□□□ 0.67
CTSA-204ENST00000372484 TMEM63BQ5T3F8 832 aa19.24■□□□□ 0.67
CTSA-204ENST00000372484 ZPBP2Q6X784 338 aa19.24■□□□□ 0.67
CTSA-204ENST00000372484 SCFD2Q8WU76 684 aa19.24■□□□□ 0.67
CTSA-204ENST00000372484 BUD13Q9BRD0 619 aaKnown RBP eCLIP19.24■□□□□ 0.671e-6■■■□□ 18.7
CTSA-204ENST00000372484 SMARCAD1Q9H4L7 1026 aa19.24■□□□□ 0.67
CTSA-204ENST00000372484 TMEM59LQ9UK28 342 aa19.24■□□□□ 0.67
CTSA-204ENST00000372484 TRPC6Q9Y210 931 aa19.24■□□□□ 0.67
CTSA-204ENST00000372484 SLC26A2P50443 739 aa19.23■□□□□ 0.67
CTSA-204ENST00000372484 HADHBP55084 474 aaKnown RBP19.23■□□□□ 0.67
CTSA-204ENST00000372484 CCNA1P78396 465 aa19.23■□□□□ 0.67
CTSA-204ENST00000372484 ARMCX2Q7L311 632 aa19.23■□□□□ 0.67
CTSA-204ENST00000372484 RNF149Q8NC42 400 aa19.23■□□□□ 0.67
CTSA-204ENST00000372484 CALR3Q96L12 384 aaKnown RBP19.23■□□□□ 0.67
CTSA-204ENST00000372484 TCHPQ9BT92 498 aa19.23■□□□□ 0.67
CTSA-204ENST00000372484 MRPL4Q9BYD3 311 aaKnown RBP19.23■□□□□ 0.67
CTSA-204ENST00000372484 ACBD3Q9H3P7 528 aa19.23■□□□□ 0.67
CTSA-204ENST00000372484 NOC2LQ9Y3T9 749 aaKnown RBP19.23■□□□□ 0.67
CTSA-204ENST00000372484 PLXNA1Q9UIW2 1896 aa19.23■□□□□ 0.67
CTSA-204ENST00000372484 TTLL13PA6NNM8 815 aa19.22■□□□□ 0.67
CTSA-204ENST00000372484 PDHXO00330 501 aa19.22■□□□□ 0.67
CTSA-204ENST00000372484 MSCO60682 206 aa19.22■□□□□ 0.67
CTSA-204ENST00000372484 SEZ6Q53EL9 994 aa19.22■□□□□ 0.67
CTSA-204ENST00000372484 MAP1SQ66K74 1059 aaPredicted RBP19.22■□□□□ 0.67
CTSA-204ENST00000372484 ZBTB8OSQ8IWT0 167 aa19.22■□□□□ 0.67
CTSA-204ENST00000372484 AENQ8WTP8 325 aaKnown RBP19.22■□□□□ 0.67
CTSA-204ENST00000372484 ZBTB9Q96C00 473 aa19.22■□□□□ 0.67
CTSA-204ENST00000372484 VIPAS39Q9H9C1 493 aa19.22■□□□□ 0.67
CTSA-204ENST00000372484 IGKV6-21A0A0C4DH24 114 aa19.22■□□□□ 0.67
CTSA-204ENST00000372484 POTEJP0CG39 1038 aa19.22■□□□□ 0.67
CTSA-204ENST00000372484 MKRN3Q13064 507 aaKnown RBP19.22■□□□□ 0.67
CTSA-204ENST00000372484 TCEAL1Q15170 157 aa19.22■□□□□ 0.67
CTSA-204ENST00000372484 CDCA2Q69YH5 1023 aaPredicted RBP19.22■□□□□ 0.67
CTSA-204ENST00000372484 KLHL7Q8IXQ5 586 aa19.22■□□□□ 0.67
CTSA-204ENST00000372484 DDX1Q92499 740 aaKnown RBP19.22■□□□□ 0.67
CTSA-204ENST00000372484 CGRRF1Q99675 332 aa19.22■□□□□ 0.67
CTSA-204ENST00000372484 JPH2Q9BR39 696 aaPredicted RBP19.22■□□□□ 0.67
CTSA-204ENST00000372484 CCDC113Q9H0I3 377 aa19.22■□□□□ 0.67
CTSA-204ENST00000372484 ZCCHC17Q9NP64 241 aaKnown RBP19.22■□□□□ 0.67
CTSA-204ENST00000372484 H3BQF6 201 aa19.21■□□□□ 0.67
CTSA-204ENST00000372484 TOM1L1O75674 476 aa19.21■□□□□ 0.67
CTSA-204ENST00000372484 HEXIM1O94992 359 aaKnown RBP19.21■□□□□ 0.67
CTSA-204ENST00000372484 VNN1O95497 513 aa19.21■□□□□ 0.67
CTSA-204ENST00000372484 GLI1P08151 1106 aa19.21■□□□□ 0.67
CTSA-204ENST00000372484 CETPP11597 493 aa19.21■□□□□ 0.67
CTSA-204ENST00000372484 MAPK6Q16659 721 aa19.21■□□□□ 0.67
CTSA-204ENST00000372484 ZBTB33Q86T24 672 aa19.21■□□□□ 0.67
CTSA-204ENST00000372484 RHPN2Q8IUC4 686 aa19.21■□□□□ 0.67
CTSA-204ENST00000372484 IFT20Q8IY31 132 aa19.21■□□□□ 0.67
CTSA-204ENST00000372484 RASGEF1CQ8N431 466 aa19.21■□□□□ 0.67
CTSA-204ENST00000372484 TRAPPC12Q8WVT3 735 aa19.21■□□□□ 0.67
CTSA-204ENST00000372484 AP1M1Q9BXS5 423 aa19.21■□□□□ 0.67
CTSA-204ENST00000372484 CNTNAP2Q9UHC6 1331 aa19.21■□□□□ 0.67
CTSA-204ENST00000372484 PLXNB2O15031 1838 aa19.21■□□□□ 0.67
CTSA-204ENST00000372484 PRKCBP05771 671 aa19.21■□□□□ 0.67
CTSA-204ENST00000372484 TNFRSF8P28908 595 aa19.21■□□□□ 0.67
CTSA-204ENST00000372484 ADORA2AP29274 412 aa19.21■□□□□ 0.67
CTSA-204ENST00000372484 TERF2Q15554 542 aa19.21■□□□□ 0.67
CTSA-204ENST00000372484 SPOPLQ6IQ16 392 aa19.21■□□□□ 0.67
CTSA-204ENST00000372484 C11orf63Q6NUN7 778 aa19.21■□□□□ 0.67
CTSA-204ENST00000372484 PLEKHA4Q9H4M7 779 aa19.21■□□□□ 0.67
CTSA-204ENST00000372484 CHORDC1Q9UHD1 332 aaPredicted RBP19.21■□□□□ 0.67
CTSA-204ENST00000372484 DIS3Q9Y2L1 958 aaKnown RBP19.21■□□□□ 0.67
CTSA-204ENST00000372484 ALG6Q9Y672 507 aa19.21■□□□□ 0.67
CTSA-204ENST00000372484 EVPLQ92817 2033 aa19.2■□□□□ 0.66
CTSA-204ENST00000372484 UNCXA6NJT0 531 aa19.2■□□□□ 0.66
CTSA-204ENST00000372484 KRIT1O00522 736 aa19.2■□□□□ 0.66
CTSA-204ENST00000372484 DDX3YO15523 660 aaKnown RBP19.2■□□□□ 0.66
CTSA-204ENST00000372484 ATMINO43313 823 aaPredicted RBP19.2■□□□□ 0.66
CTSA-204ENST00000372484 HBP1O60381 514 aa19.2■□□□□ 0.66
CTSA-204ENST00000372484 CLSTN1O94985 981 aa19.2■□□□□ 0.66
CTSA-204ENST00000372484 GUCY2DQ02846 1103 aa19.2■□□□□ 0.66
CTSA-204ENST00000372484 CCDC102AQ96A19 550 aa19.2■□□□□ 0.66
CTSA-204ENST00000372484 MS4A4AQ96JQ5 239 aa19.2■□□□□ 0.66
CTSA-204ENST00000372484 ACO2Q99798 780 aaKnown RBP19.2■□□□□ 0.66
CTSA-204ENST00000372484 C2orf40Q9H1Z8 148 aa19.2■□□□□ 0.66
CTSA-204ENST00000372484 EPB41L5Q9HCM4 733 aa19.2■□□□□ 0.66
CTSA-204ENST00000372484 HPCAL4Q9UM19 191 aa19.2■□□□□ 0.66
CTSA-204ENST00000372484 CCL15-CCL14A0A0B4J2E2 113 aa19.19■□□□□ 0.66
CTSA-204ENST00000372484 BTBD19C9JJ37 291 aa19.19■□□□□ 0.66
CTSA-204ENST00000372484 PHACTR2O75167 634 aa19.19■□□□□ 0.66
CTSA-204ENST00000372484 TNFSF9P41273 254 aa19.19■□□□□ 0.66
CTSA-204ENST00000372484 GTF2A2P52657 109 aa19.19■□□□□ 0.66
CTSA-204ENST00000372484 EPHB4P54760 987 aa19.19■□□□□ 0.66
CTSA-204ENST00000372484 CCL15Q16663 113 aa19.19■□□□□ 0.66
CTSA-204ENST00000372484 ZNF792Q3KQV3 632 aa19.19■□□□□ 0.66
CTSA-204ENST00000372484 OR5B17Q8NGF7 314 aa19.19■□□□□ 0.66
CTSA-204ENST00000372484 ZNF653Q96CK0 615 aa19.19■□□□□ 0.66
CTSA-204ENST00000372484 NLRP4Q96MN2 994 aa19.19■□□□□ 0.66
CTSA-204ENST00000372484 ERAP1Q9NZ08 941 aa19.19■□□□□ 0.66
CTSA-204ENST00000372484 PCDHB2Q9Y5E7 798 aa19.19■□□□□ 0.66
CTSA-204ENST00000372484 RAD51CO43502 376 aa19.19■□□□□ 0.66
CTSA-204ENST00000372484 GRIN3BO60391 1043 aa19.19■□□□□ 0.66
CTSA-204ENST00000372484 CALCAP01258 141 aa19.19■□□□□ 0.66
CTSA-204ENST00000372484 HSP90B2PQ58FF3 399 aa19.19■□□□□ 0.66
CTSA-204ENST00000372484 EFCAB12Q6NXP0 572 aa19.19■□□□□ 0.66
CTSA-204ENST00000372484 BRSK2Q8IWQ3 736 aa19.19■□□□□ 0.66
CTSA-204ENST00000372484 CARD9Q9H257 536 aa19.19■□□□□ 0.66
CTSA-204ENST00000372484 GDF3Q9NR23 364 aa19.19■□□□□ 0.66
Retrieved 100 of 20,778 RNA–protein pairs in 80.9 ms