RNA–Protein interactions for RNA: ENST00000372235.7

TMEM53-201, Transcript of transmembrane protein 53, humanhuman

TSL 2 BASIC

Gene TMEM53, Length 890 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM53-201ENST00000372235 C2CD4DB7Z1M9 353 aa20.71■□□□□ 0.91
TMEM53-201ENST00000372235 TOM1L1O75674 476 aa20.71■□□□□ 0.91
TMEM53-201ENST00000372235 BRD1O95696 1058 aa20.71■□□□□ 0.91
TMEM53-201ENST00000372235 SLC12A3P55017 1021 aa20.71■□□□□ 0.91
TMEM53-201ENST00000372235 KYAT1Q16773 422 aa20.71■□□□□ 0.91
TMEM53-201ENST00000372235 TMEM119Q4V9L6 283 aa20.71■□□□□ 0.91
TMEM53-201ENST00000372235 MPZL3Q6UWV2 235 aa20.71■□□□□ 0.91
TMEM53-201ENST00000372235 ZPBP2Q6X784 338 aa20.71■□□□□ 0.91
TMEM53-201ENST00000372235 PDZRN4Q6ZMN7 1036 aaPredicted RBP20.71■□□□□ 0.91
TMEM53-201ENST00000372235 PIK3R5Q8WYR1 880 aa20.71■□□□□ 0.91
TMEM53-201ENST00000372235 ACAP3Q96P50 834 aa20.71■□□□□ 0.91
TMEM53-201ENST00000372235 PTPRHQ9HD43 1115 aa20.71■□□□□ 0.91
TMEM53-201ENST00000372235 CCDC195A0A1B0GUA6 201 aa20.7■□□□□ 0.9
TMEM53-201ENST00000372235 PAPLNO95428 1278 aa20.7■□□□□ 0.9
TMEM53-201ENST00000372235 MAPK7Q13164 816 aa20.7■□□□□ 0.9
TMEM53-201ENST00000372235 NAB2Q15742 525 aa20.7■□□□□ 0.9
TMEM53-201ENST00000372235 FAM171A1Q5VUB5 890 aa20.7■□□□□ 0.9
TMEM53-201ENST00000372235 RTL10Q7L3V2 364 aa20.7■□□□□ 0.9
TMEM53-201ENST00000372235 KCNK18Q7Z418 384 aa20.7■□□□□ 0.9
TMEM53-201ENST00000372235 KREMEN2Q8NCW0 462 aa20.7■□□□□ 0.9
TMEM53-201ENST00000372235 KCNN1Q92952 543 aa20.7■□□□□ 0.9
TMEM53-201ENST00000372235 INTS4Q96HW7 963 aaKnown RBP20.7■□□□□ 0.9
TMEM53-201ENST00000372235 PNMA5Q96PV4 448 aa20.7■□□□□ 0.9
TMEM53-201ENST00000372235 PPP1R10Q96QC0 940 aaKnown RBP20.7■□□□□ 0.9
TMEM53-201ENST00000372235 CDT1Q9H211 546 aa20.7■□□□□ 0.9
TMEM53-201ENST00000372235 POLD4Q9HCU8 107 aa20.7■□□□□ 0.9
TMEM53-201ENST00000372235 VPS37CA5D8V6 355 aaPredicted RBP20.69■□□□□ 0.9
TMEM53-201ENST00000372235 SLC16A4O15374 487 aa20.69■□□□□ 0.9
TMEM53-201ENST00000372235 TGM5O43548 720 aa20.69■□□□□ 0.9
TMEM53-201ENST00000372235 B3GAT3O94766 335 aa20.69■□□□□ 0.9
TMEM53-201ENST00000372235 KIF4AO95239 1232 aa20.69■□□□□ 0.9
TMEM53-201ENST00000372235 WEE2P0C1S8 567 aa20.69■□□□□ 0.9
TMEM53-201ENST00000372235 PROZP22891 400 aa20.69■□□□□ 0.9
TMEM53-201ENST00000372235 SP100P23497 879 aaPredicted RBP20.69■□□□□ 0.9
TMEM53-201ENST00000372235 XKR4Q5GH76 650 aa20.69■□□□□ 0.9
TMEM53-201ENST00000372235 CEP57Q86XR8 500 aa20.69■□□□□ 0.9
TMEM53-201ENST00000372235 FBXL6Q8N531 539 aa20.69■□□□□ 0.9
TMEM53-201ENST00000372235 TARS2Q9BW92 718 aaKnown RBP20.69■□□□□ 0.9
TMEM53-201ENST00000372235 PIDD1Q9HB75 910 aa20.69■□□□□ 0.9
TMEM53-201ENST00000372235 WDR6Q9NNW5 1121 aaKnown RBP20.69■□□□□ 0.9
TMEM53-201ENST00000372235 SMIM28A0A1B0GU29 152 aa20.68■□□□□ 0.9
TMEM53-201ENST00000372235 F8W810 466 aa20.68■□□□□ 0.9
TMEM53-201ENST00000372235 CLDN3O15551 220 aa20.68■□□□□ 0.9
TMEM53-201ENST00000372235 EDN1P05305 212 aa20.68■□□□□ 0.9
TMEM53-201ENST00000372235 RPL9P32969 192 aaKnown RBP20.68■□□□□ 0.9
TMEM53-201ENST00000372235 NUBP1P53384 320 aa20.68■□□□□ 0.9
TMEM53-201ENST00000372235 SF3A1Q15459 793 aaKnown RBP20.68■□□□□ 0.9
TMEM53-201ENST00000372235 PSMD5Q16401 504 aa20.68■□□□□ 0.9
TMEM53-201ENST00000372235 LIN9Q5TKA1 542 aa20.68■□□□□ 0.9
TMEM53-201ENST00000372235 LILRA6Q6PI73 481 aa20.68■□□□□ 0.9
TMEM53-201ENST00000372235 ALKAL1Q6UXT8 129 aa20.68■□□□□ 0.9
TMEM53-201ENST00000372235 PALB2Q86YC2 1186 aa20.68■□□□□ 0.9
TMEM53-201ENST00000372235 TMEM161BQ8NDZ6 487 aa20.68■□□□□ 0.9
TMEM53-201ENST00000372235 SMG7Q92540 1137 aaKnown RBP20.68■□□□□ 0.9
TMEM53-201ENST00000372235 NXPE3Q969Y0 559 aa20.68■□□□□ 0.9
TMEM53-201ENST00000372235 FAM120AQ9NZB2 1118 aaKnown RBP eCLIP20.68■□□□□ 0.9
TMEM53-201ENST00000372235 IGSF9Q9P2J2 1179 aa20.68■□□□□ 0.9
TMEM53-201ENST00000372235 USP20Q9Y2K6 914 aa20.68■□□□□ 0.9
TMEM53-201ENST00000372235 SFI1A8K8P3 1242 aa20.67■□□□□ 0.9
TMEM53-201ENST00000372235 HNRNPA1P09651 372 aaKnown RBP eCLIP20.67■□□□□ 0.9
TMEM53-201ENST00000372235 MAPTP10636 758 aaKnown RBP20.67■□□□□ 0.9
TMEM53-201ENST00000372235 KCNE1P15382 129 aa20.67■□□□□ 0.9
TMEM53-201ENST00000372235 TXLNAP40222 546 aa20.67■□□□□ 0.9
TMEM53-201ENST00000372235 NOLC1Q14978 699 aaKnown RBP eCLIP20.67■□□□□ 0.93e-11■□□□□ 9.8
TMEM53-201ENST00000372235 UPP1Q16831 310 aa20.67■□□□□ 0.9
TMEM53-201ENST00000372235 RTP2Q5QGT7 225 aa20.67■□□□□ 0.9
TMEM53-201ENST00000372235 ANKS3Q6ZW76 656 aa20.67■□□□□ 0.9
TMEM53-201ENST00000372235 LNX1Q8TBB1 728 aaPredicted RBP20.67■□□□□ 0.9
TMEM53-201ENST00000372235 HASPINQ8TF76 798 aa20.67■□□□□ 0.9
TMEM53-201ENST00000372235 TSPAN18Q96SJ8 248 aa20.67■□□□□ 0.9
TMEM53-201ENST00000372235 PLIN2Q99541 437 aa20.67■□□□□ 0.9
TMEM53-201ENST00000372235 PAAF1Q9BRP4 392 aa20.67■□□□□ 0.9
TMEM53-201ENST00000372235 PRKD2Q9BZL6 878 aa20.67■□□□□ 0.9
TMEM53-201ENST00000372235 CCSER1Q9C0I3 900 aa20.67■□□□□ 0.9
TMEM53-201ENST00000372235 IRF2BPLQ9H1B7 796 aa20.67■□□□□ 0.9
TMEM53-201ENST00000372235 PLEKHA5Q9HAU0 1116 aa20.67■□□□□ 0.9
TMEM53-201ENST00000372235 CNTN3Q9P232 1028 aa20.67■□□□□ 0.9
TMEM53-201ENST00000372235 CCDC39Q9UFE4 941 aa20.67■□□□□ 0.9
TMEM53-201ENST00000372235 LIMD1Q9UGP4 676 aa20.67■□□□□ 0.9
TMEM53-201ENST00000372235 ZFP37Q9Y6Q3 630 aaPredicted RBP20.67■□□□□ 0.9
TMEM53-201ENST00000372235 C5orf42Q9H799 3197 aa20.67■□□□□ 0.9
TMEM53-201ENST00000372235 KRT18P05783 430 aaKnown RBP20.66■□□□□ 0.9
TMEM53-201ENST00000372235 PDIA4P13667 645 aaKnown RBP20.66■□□□□ 0.9
TMEM53-201ENST00000372235 HOXA9P31269 272 aa20.66■□□□□ 0.9
TMEM53-201ENST00000372235 CLCNKBP51801 687 aa20.66■□□□□ 0.9
TMEM53-201ENST00000372235 NCKAP1LP55160 1127 aa20.66■□□□□ 0.9
TMEM53-201ENST00000372235 RAD51AP2Q09MP3 1159 aa20.66■□□□□ 0.9
TMEM53-201ENST00000372235 UVSSAQ2YD98 709 aa20.66■□□□□ 0.9
TMEM53-201ENST00000372235 KANK3Q6NY19 840 aa20.66■□□□□ 0.9
TMEM53-201ENST00000372235 TAS1R3Q7RTX0 852 aa20.66■□□□□ 0.9
TMEM53-201ENST00000372235 RABGGTAQ92696 567 aa20.66■□□□□ 0.9
TMEM53-201ENST00000372235 ASIC4Q96FT7 647 aa20.66■□□□□ 0.9
TMEM53-201ENST00000372235 BICD1Q96G01 975 aa20.66■□□□□ 0.9
TMEM53-201ENST00000372235 B3GALT6Q96L58 329 aa20.66■□□□□ 0.9
TMEM53-201ENST00000372235 SNX27Q96L92 541 aa20.66■□□□□ 0.9
TMEM53-201ENST00000372235 PARVGQ9HBI0 331 aa20.66■□□□□ 0.9
TMEM53-201ENST00000372235 CDH22Q9UJ99 828 aa20.66■□□□□ 0.9
TMEM53-201ENST00000372235 CLUHO75153 1309 aa20.65■□□□□ 0.9
TMEM53-201ENST00000372235 TBCAO75347 108 aaKnown RBP20.65■□□□□ 0.9
TMEM53-201ENST00000372235 ZMYND10O75800 440 aa20.65■□□□□ 0.9
Retrieved 100 of 20,778 RNA–protein pairs in 105.4 ms