RNA–Protein interactions for RNA: ENST00000361311.4

CLSTN1-201, Transcript of calsyntenin 1, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene CLSTN1, Length 4,647 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLSTN1-201ENST00000361311 PADI6Q6TGC4 694 aa16.92■□□□□ 0.3
CLSTN1-201ENST00000361311 MIGA2Q7L4E1 593 aa16.92■□□□□ 0.3
CLSTN1-201ENST00000361311 CDAN1Q8IWY9 1227 aa16.92■□□□□ 0.3
CLSTN1-201ENST00000361311 XAB2Q9HCS7 855 aaKnown RBP16.92■□□□□ 0.3
CLSTN1-201ENST00000361311 SMYD2Q9NRG4 433 aa16.92■□□□□ 0.3
CLSTN1-201ENST00000361311 CNGA3Q16281 694 aa16.92■□□□□ 0.3
CLSTN1-201ENST00000361311 QRICH1Q2TAL8 776 aa16.92■□□□□ 0.3
CLSTN1-201ENST00000361311 TAF1BQ53T94 588 aaPredicted RBP16.92■□□□□ 0.3
CLSTN1-201ENST00000361311 WASHC2DQ5SRD0 308 aa16.92■□□□□ 0.3
CLSTN1-201ENST00000361311 RARS2Q5T160 578 aaKnown RBP16.92■□□□□ 0.3
CLSTN1-201ENST00000361311 SYDE2Q5VT97 1194 aa16.92■□□□□ 0.3
CLSTN1-201ENST00000361311 SLC37A4O43826 429 aa16.91■□□□□ 0.3
CLSTN1-201ENST00000361311 HNRNPH3P31942 346 aaKnown RBP16.91■□□□□ 0.3
CLSTN1-201ENST00000361311 RFC5P40937 340 aa16.91■□□□□ 0.3
CLSTN1-201ENST00000361311 CYLC2Q14093 348 aaPredicted RBP16.91■□□□□ 0.3
CLSTN1-201ENST00000361311 CXorf38Q8TB03 319 aa16.91■□□□□ 0.3
CLSTN1-201ENST00000361311 OSBPL8Q9BZF1 889 aa16.91■□□□□ 0.3
CLSTN1-201ENST00000361311 METTL5Q9NRN9 209 aaKnown RBP16.91■□□□□ 0.3
CLSTN1-201ENST00000361311 CORO1CQ9ULV4 474 aaPredicted RBP16.91■□□□□ 0.3
CLSTN1-201ENST00000361311 GRIN2DO15399 1336 aa16.91■□□□□ 0.3
CLSTN1-201ENST00000361311 TCRBV5S4A2TA0A5A2 114 aa16.91■□□□□ 0.3
CLSTN1-201ENST00000361311 HSPA4LO95757 839 aa16.91■□□□□ 0.3
CLSTN1-201ENST00000361311 TTC4O95801 387 aa16.91■□□□□ 0.3
CLSTN1-201ENST00000361311 ZBED1O96006 694 aa16.91■□□□□ 0.3
CLSTN1-201ENST00000361311 ARHGAP22Q7Z5H3 698 aa16.91■□□□□ 0.3
CLSTN1-201ENST00000361311 ACAP3Q96P50 834 aa16.91■□□□□ 0.3
CLSTN1-201ENST00000361311 FAM96AQ9H5X1 160 aa16.91■□□□□ 0.3
CLSTN1-201ENST00000361311 SHBGP04278 402 aa16.91■□□□□ 0.3
CLSTN1-201ENST00000361311 CYP19A1P11511 503 aaPredicted RBP16.91■□□□□ 0.3
CLSTN1-201ENST00000361311 PSMA2P25787 234 aa16.91■□□□□ 0.3
CLSTN1-201ENST00000361311 RPL21P46778 160 aaKnown RBP16.91■□□□□ 0.3
CLSTN1-201ENST00000361311 STAT2P52630 851 aa16.91■□□□□ 0.3
CLSTN1-201ENST00000361311 MTDHQ86UE4 582 aaKnown RBP16.91■□□□□ 0.3
CLSTN1-201ENST00000361311 NT5DC3Q86UY8 548 aa16.91■□□□□ 0.3
CLSTN1-201ENST00000361311 HAUS8Q9BT25 410 aa16.91■□□□□ 0.3
CLSTN1-201ENST00000361311 MANSC1Q9H8J5 431 aa16.91■□□□□ 0.3
CLSTN1-201ENST00000361311 PPCSQ9HAB8 311 aa16.91■□□□□ 0.3
CLSTN1-201ENST00000361311 CHCHD3Q9NX63 227 aaKnown RBP16.91■□□□□ 0.3
CLSTN1-201ENST00000361311 GOLGA8QA0A0J9YX86 632 aa16.9■□□□□ 0.3
CLSTN1-201ENST00000361311 GOLGA8OA6NCC3 632 aa16.9■□□□□ 0.3
CLSTN1-201ENST00000361311 GOLGA8NF8WBI6 632 aa16.9■□□□□ 0.3
CLSTN1-201ENST00000361311 KLRC4O43908 158 aa16.9■□□□□ 0.3
CLSTN1-201ENST00000361311 EPHB2P29323 1055 aa16.9■□□□□ 0.3
CLSTN1-201ENST00000361311 DSG1Q02413 1049 aa16.9■□□□□ 0.3
CLSTN1-201ENST00000361311 ATG4AQ8WYN0 398 aa16.9■□□□□ 0.3
CLSTN1-201ENST00000361311 KNDC1Q76NI1 1749 aa16.9■□□□□ 0.3
CLSTN1-201ENST00000361311 ITSN1Q15811 1721 aa16.9■□□□□ 0.3
CLSTN1-201ENST00000361311 AHCYL1O43865 530 aa16.9■□□□□ 0.3
CLSTN1-201ENST00000361311 CYP11B2P19099 503 aa16.9■□□□□ 0.3
CLSTN1-201ENST00000361311 RAPH1Q70E73 1250 aa16.9■□□□□ 0.3
CLSTN1-201ENST00000361311 BRINP3Q76B58 766 aa16.9■□□□□ 0.3
CLSTN1-201ENST00000361311 JDP2Q8WYK2 163 aa16.9■□□□□ 0.3
CLSTN1-201ENST00000361311 SEPT10Q9P0V9 454 aa16.9■□□□□ 0.3
CLSTN1-201ENST00000361311 WHRNQ9P202 907 aa16.9■□□□□ 0.3
CLSTN1-201ENST00000361311 C2CD2Q9Y426 696 aa16.9■□□□□ 0.3
CLSTN1-201ENST00000361311 TTLL3Q9Y4R7 772 aa16.9■□□□□ 0.3
CLSTN1-201ENST00000361311 E7ENQ6 273 aa16.9■□□□□ 0.3
CLSTN1-201ENST00000361311 RASSF9O75901 435 aa16.9■□□□□ 0.3
CLSTN1-201ENST00000361311 APOEP02649 317 aa16.9■□□□□ 0.3
CLSTN1-201ENST00000361311 TMEM270Q6UE05 265 aa16.9■□□□□ 0.3
CLSTN1-201ENST00000361311 KLHL11Q9NVR0 708 aa16.9■□□□□ 0.3
CLSTN1-201ENST00000361311 MAD2L2Q9UI95 211 aa16.9■□□□□ 0.3
CLSTN1-201ENST00000361311 ZNF263O14978 683 aa16.9■□□□□ 0.3
CLSTN1-201ENST00000361311 KRT4P19013 534 aa16.9■□□□□ 0.3
CLSTN1-201ENST00000361311 PRELPP51888 382 aa16.9■□□□□ 0.3
CLSTN1-201ENST00000361311 SPDYCQ5MJ68 293 aa16.9■□□□□ 0.3
CLSTN1-201ENST00000361311 IRGCQ6NXR0 463 aa16.9■□□□□ 0.3
CLSTN1-201ENST00000361311 TRIM50Q86XT4 487 aa16.9■□□□□ 0.3
CLSTN1-201ENST00000361311 ATP8B4Q8TF62 1192 aa16.9■□□□□ 0.3
CLSTN1-201ENST00000361311 GFM2Q969S9 779 aaKnown RBP16.9■□□□□ 0.3
CLSTN1-201ENST00000361311 RPS6KC1Q96S38 1066 aa16.9■□□□□ 0.3
CLSTN1-201ENST00000361311 TMEM117Q9H0C3 514 aa16.9■□□□□ 0.3
CLSTN1-201ENST00000361311 TNNC2P02585 160 aa16.89■□□□□ 0.29
CLSTN1-201ENST00000361311 EEF1B2P24534 225 aaKnown RBP16.89■□□□□ 0.29
CLSTN1-201ENST00000361311 ECE1P42892 770 aa16.89■□□□□ 0.29
CLSTN1-201ENST00000361311 CEP170P1Q96L14 293 aa16.89■□□□□ 0.29
CLSTN1-201ENST00000361311 NAALADL1Q9UQQ1 740 aa16.89■□□□□ 0.29
CLSTN1-201ENST00000361311 GDF11O95390 407 aa16.89■□□□□ 0.29
CLSTN1-201ENST00000361311 CYTH1Q15438 398 aa16.89■□□□□ 0.29
CLSTN1-201ENST00000361311 ZC2HC1CQ53FD0 456 aaPredicted RBP16.89■□□□□ 0.29
CLSTN1-201ENST00000361311 PARD3BQ8TEW8 1205 aa16.89■□□□□ 0.29
CLSTN1-201ENST00000361311 MED15Q96RN5 788 aa16.89■□□□□ 0.29
CLSTN1-201ENST00000361311 FOXN3O00409 490 aaPredicted RBP16.89■□□□□ 0.29
CLSTN1-201ENST00000361311 CASP4P49662 377 aa16.89■□□□□ 0.29
CLSTN1-201ENST00000361311 CCNHP51946 323 aaPredicted RBP16.89■□□□□ 0.29
CLSTN1-201ENST00000361311 CNGA2Q16280 664 aa16.89■□□□□ 0.29
CLSTN1-201ENST00000361311 LACTB2Q53H82 288 aaPredicted RBP16.89■□□□□ 0.29
CLSTN1-201ENST00000361311 C16orf87Q6PH81 154 aa16.89■□□□□ 0.29
CLSTN1-201ENST00000361311 C1orf131Q8NDD1 294 aaKnown RBP16.89■□□□□ 0.29
CLSTN1-201ENST00000361311 SNRNP27Q8WVK2 155 aaKnown RBP16.89■□□□□ 0.29
CLSTN1-201ENST00000361311 BAP1Q92560 729 aa16.89■□□□□ 0.29
CLSTN1-201ENST00000361311 MKNK1Q9BUB5 465 aa16.89■□□□□ 0.29
CLSTN1-201ENST00000361311 GIPC1O14908 333 aa16.89■□□□□ 0.29
CLSTN1-201ENST00000361311 SLC16A4O15374 487 aa16.89■□□□□ 0.29
CLSTN1-201ENST00000361311 FBXL13Q8NEE6 735 aa16.89■□□□□ 0.29
CLSTN1-201ENST00000361311 GABPB2Q8TAK5 448 aaPredicted RBP16.89■□□□□ 0.29
CLSTN1-201ENST00000361311 SCFD1Q8WVM8 642 aa16.89■□□□□ 0.29
CLSTN1-201ENST00000361311 GPR101Q96P66 508 aaPredicted RBP16.89■□□□□ 0.29
CLSTN1-201ENST00000361311 IP6K2Q9UHH9 426 aa16.89■□□□□ 0.29
CLSTN1-201ENST00000361311 ROR2Q01974 943 aaKnown RBP16.88■□□□□ 0.29
Retrieved 100 of 20,778 RNA–protein pairs in 29.3 ms