RNA–Protein interactions for RNA: ENST00000359895.6

PDLIM7-203, Transcript of PDZ and LIM domain 7, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene PDLIM7, Length 1,567 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM7-203ENST00000359895 TAF1DQ9H5J8 278 aaPredicted RBP19.67■□□□□ 0.74
PDLIM7-203ENST00000359895 GDF3Q9NR23 364 aa19.67■□□□□ 0.74
PDLIM7-203ENST00000359895 NOC2LQ9Y3T9 749 aaKnown RBP19.67■□□□□ 0.74
PDLIM7-203ENST00000359895 ADGRA2Q96PE1 1338 aa19.67■□□□□ 0.74
PDLIM7-203ENST00000359895 IGKV6-21A0A0C4DH24 114 aa19.66■□□□□ 0.74
PDLIM7-203ENST00000359895 CLSTN1O94985 981 aa19.66■□□□□ 0.74
PDLIM7-203ENST00000359895 HEXIM1O94992 359 aaKnown RBP19.66■□□□□ 0.74
PDLIM7-203ENST00000359895 MYBL2P10244 700 aa19.66■□□□□ 0.74
PDLIM7-203ENST00000359895 AARSP49588 968 aaKnown RBP eCLIP19.66■□□□□ 0.744e-9■■□□□ 11.9
PDLIM7-203ENST00000359895 C1QTNF8P60827 252 aa19.66■□□□□ 0.74
PDLIM7-203ENST00000359895 GRM1Q13255 1194 aa19.66■□□□□ 0.74
PDLIM7-203ENST00000359895 NNTQ13423 1086 aa19.66■□□□□ 0.74
PDLIM7-203ENST00000359895 FAM71BQ8TC56 605 aa19.66■□□□□ 0.74
PDLIM7-203ENST00000359895 NAP1L3Q99457 506 aaPredicted RBP19.66■□□□□ 0.74
PDLIM7-203ENST00000359895 HAPLN2Q9GZV7 340 aa19.66■□□□□ 0.74
PDLIM7-203ENST00000359895 CARD9Q9H257 536 aa19.66■□□□□ 0.74
PDLIM7-203ENST00000359895 RRAGCQ9HB90 399 aa19.66■□□□□ 0.74
PDLIM7-203ENST00000359895 UTP3Q9NQZ2 479 aaKnown RBP eCLIP19.66■□□□□ 0.741e-6■■■■■ 56
PDLIM7-203ENST00000359895 ANKFY1Q9P2R3 1169 aa19.66■□□□□ 0.74
PDLIM7-203ENST00000359895 HPCAL4Q9UM19 191 aa19.66■□□□□ 0.74
PDLIM7-203ENST00000359895 SLC45A1Q9Y2W3 748 aa19.66■□□□□ 0.74
PDLIM7-203ENST00000359895 POLR3GO15318 223 aaPredicted RBP19.66■□□□□ 0.74
PDLIM7-203ENST00000359895 DDX3YO15523 660 aaKnown RBP19.66■□□□□ 0.74
PDLIM7-203ENST00000359895 MMEP08473 750 aa19.66■□□□□ 0.74
PDLIM7-203ENST00000359895 KRT5P13647 590 aa19.66■□□□□ 0.74
PDLIM7-203ENST00000359895 GJA5P36382 358 aa19.66■□□□□ 0.74
PDLIM7-203ENST00000359895 RNASE9P60153 205 aaKnown RBP19.66■□□□□ 0.74
PDLIM7-203ENST00000359895 DMTNQ08495 405 aa19.66■□□□□ 0.74
PDLIM7-203ENST00000359895 PAK2Q13177 524 aa19.66■□□□□ 0.74
PDLIM7-203ENST00000359895 BIRC3Q13489 604 aa19.66■□□□□ 0.74
PDLIM7-203ENST00000359895 PLCB4Q15147 1175 aa19.66■□□□□ 0.74
PDLIM7-203ENST00000359895 HSDL1Q3SXM5 330 aa19.66■□□□□ 0.74
PDLIM7-203ENST00000359895 TDRD10Q5VZ19 366 aaKnown RBP19.66■□□□□ 0.74
PDLIM7-203ENST00000359895 FBXO16Q8IX29 292 aaPredicted RBP19.66■□□□□ 0.74
PDLIM7-203ENST00000359895 EIF1ADQ8N9N8 165 aaKnown RBP19.66■□□□□ 0.74
PDLIM7-203ENST00000359895 DGCR8Q8WYQ5 773 aaKnown RBP eCLIP19.66■□□□□ 0.74
PDLIM7-203ENST00000359895 CAVIN3Q969G5 261 aa19.66■□□□□ 0.74
PDLIM7-203ENST00000359895 ZBTB45Q96K62 511 aaPredicted RBP19.66■□□□□ 0.74
PDLIM7-203ENST00000359895 RPS6KC1Q96S38 1066 aa19.66■□□□□ 0.74
PDLIM7-203ENST00000359895 CCDC113Q9H0I3 377 aa19.66■□□□□ 0.74
PDLIM7-203ENST00000359895 GTF3C4Q9UKN8 822 aa19.66■□□□□ 0.74
PDLIM7-203ENST00000359895 COG5Q9UP83 839 aa19.66■□□□□ 0.74
PDLIM7-203ENST00000359895 ZSWIM8A7E2V4 1837 aa19.65■□□□□ 0.74
PDLIM7-203ENST00000359895 H3BQF6 201 aa19.65■□□□□ 0.74
PDLIM7-203ENST00000359895 CLDN3O15551 220 aa19.65■□□□□ 0.74
PDLIM7-203ENST00000359895 HBP1O60381 514 aa19.65■□□□□ 0.74
PDLIM7-203ENST00000359895 TOM1L1O75674 476 aa19.65■□□□□ 0.74
PDLIM7-203ENST00000359895 CYP1A2P05177 515 aa19.65■□□□□ 0.74
PDLIM7-203ENST00000359895 TXNP10599 105 aaKnown RBP19.65■□□□□ 0.74
PDLIM7-203ENST00000359895 LAMTOR4Q0VGL1 99 aa19.65■□□□□ 0.74
PDLIM7-203ENST00000359895 TFDP1Q14186 410 aa19.65■□□□□ 0.74
PDLIM7-203ENST00000359895 SURF1Q15526 300 aa19.65■□□□□ 0.74
PDLIM7-203ENST00000359895 PPP2R5EQ16537 467 aa19.65■□□□□ 0.74
PDLIM7-203ENST00000359895 ACAD10Q6JQN1 1059 aa19.65■□□□□ 0.74
PDLIM7-203ENST00000359895 UBL4BQ8N7F7 174 aa19.65■□□□□ 0.74
PDLIM7-203ENST00000359895 GPRC5AQ8NFJ5 357 aa19.65■□□□□ 0.74
PDLIM7-203ENST00000359895 DDX1Q92499 740 aaKnown RBP19.65■□□□□ 0.74
PDLIM7-203ENST00000359895 PI4K2AQ9BTU6 479 aa19.65■□□□□ 0.74
PDLIM7-203ENST00000359895 SLITRK6Q9H5Y7 841 aa19.65■□□□□ 0.74
PDLIM7-203ENST00000359895 UVRAGQ9P2Y5 699 aa19.65■□□□□ 0.74
PDLIM7-203ENST00000359895 KRIT1O00522 736 aa19.64■□□□□ 0.73
PDLIM7-203ENST00000359895 TBXAS1P24557 533 aaPredicted RBP19.64■□□□□ 0.73
PDLIM7-203ENST00000359895 MARK3P27448 753 aa19.64■□□□□ 0.73
PDLIM7-203ENST00000359895 MAPK6Q16659 721 aa19.64■□□□□ 0.73
PDLIM7-203ENST00000359895 SMYD5Q6GMV2 418 aa19.64■□□□□ 0.73
PDLIM7-203ENST00000359895 BRSK2Q8IWQ3 736 aa19.64■□□□□ 0.73
PDLIM7-203ENST00000359895 GSPT2Q8IYD1 628 aaKnown RBP19.64■□□□□ 0.73
PDLIM7-203ENST00000359895 CCDC102AQ96A19 550 aa19.64■□□□□ 0.73
PDLIM7-203ENST00000359895 EPB41L5Q9HCM4 733 aa19.64■□□□□ 0.73
PDLIM7-203ENST00000359895 PCDHB2Q9Y5E7 798 aa19.64■□□□□ 0.73
PDLIM7-203ENST00000359895 ALG6Q9Y672 507 aa19.64■□□□□ 0.73
PDLIM7-203ENST00000359895 ZBTB42B2RXF5 422 aa19.63■□□□□ 0.73
PDLIM7-203ENST00000359895 ASAP2O43150 1006 aa19.63■□□□□ 0.73
PDLIM7-203ENST00000359895 MSCO60682 206 aa19.63■□□□□ 0.73
PDLIM7-203ENST00000359895 VNN1O95497 513 aa19.63■□□□□ 0.73
PDLIM7-203ENST00000359895 GLI1P08151 1106 aa19.63■□□□□ 0.73
PDLIM7-203ENST00000359895 CETPP11597 493 aa19.63■□□□□ 0.73
PDLIM7-203ENST00000359895 GUCY2DQ02846 1103 aa19.63■□□□□ 0.73
PDLIM7-203ENST00000359895 PTPROQ16827 1216 aa19.63■□□□□ 0.73
PDLIM7-203ENST00000359895 CLEC16AQ2KHT3 1053 aa19.63■□□□□ 0.73
PDLIM7-203ENST00000359895 SND1Q7KZF4 910 aaKnown RBP eCLIP19.63■□□□□ 0.73
PDLIM7-203ENST00000359895 KLHL7Q8IXQ5 586 aa19.63■□□□□ 0.73
PDLIM7-203ENST00000359895 TRIM11Q96F44 468 aa19.63■□□□□ 0.73
PDLIM7-203ENST00000359895 WNT8AQ9H1J5 351 aa19.63■□□□□ 0.73
PDLIM7-203ENST00000359895 CNTNAP2Q9UHC6 1331 aa19.63■□□□□ 0.73
PDLIM7-203ENST00000359895 EVPLQ92817 2033 aa19.62■□□□□ 0.73
PDLIM7-203ENST00000359895 RAD51CO43502 376 aa19.62■□□□□ 0.73
PDLIM7-203ENST00000359895 EDN1P05305 212 aa19.62■□□□□ 0.73
PDLIM7-203ENST00000359895 PRKCBP05771 671 aa19.62■□□□□ 0.73
PDLIM7-203ENST00000359895 MKRN4PQ13434 485 aaPredicted RBP19.62■□□□□ 0.73
PDLIM7-203ENST00000359895 DRP2Q13474 957 aa19.62■□□□□ 0.73
PDLIM7-203ENST00000359895 LMBRD2Q68DH5 695 aaPredicted RBP19.62■□□□□ 0.73
PDLIM7-203ENST00000359895 CCDC26Q8TAB7 109 aa19.62■□□□□ 0.73
PDLIM7-203ENST00000359895 ZNF653Q96CK0 615 aa19.62■□□□□ 0.73
PDLIM7-203ENST00000359895 ACO2Q99798 780 aaKnown RBP19.62■□□□□ 0.73
PDLIM7-203ENST00000359895 TRPC6Q9Y210 931 aa19.62■□□□□ 0.73
PDLIM7-203ENST00000359895 OGTO15294 1046 aa19.61■□□□□ 0.73
PDLIM7-203ENST00000359895 PHACTR2O75167 634 aa19.61■□□□□ 0.73
PDLIM7-203ENST00000359895 SRGAP2CP0DJJ0 459 aa19.61■□□□□ 0.73
PDLIM7-203ENST00000359895 WNT7BP56706 349 aa19.61■□□□□ 0.73
Retrieved 100 of 20,778 RNA–protein pairs in 65.2 ms