RNA–Protein interactions for RNA: ENST00000331920.10

PTCH1-201, Transcript of patched 1, humanhuman

APPRIS P1 TSL 5 BASIC

Gene PTCH1, Length 8,057 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTCH1-201ENST00000331920 ATP5JP18859 108 aa17.25■□□□□ 0.35
PTCH1-201ENST00000331920 POLD4Q9HCU8 107 aa17.25■□□□□ 0.35
PTCH1-201ENST00000331920 PCDHB8Q9UN66 801 aa17.25■□□□□ 0.35
PTCH1-201ENST00000331920 IQCMA0A1B0GVH7 501 aa17.25■□□□□ 0.35
PTCH1-201ENST00000331920 MRPS35P82673 323 aaKnown RBP17.25■□□□□ 0.35
PTCH1-201ENST00000331920 COG2Q14746 738 aa17.25■□□□□ 0.35
PTCH1-201ENST00000331920 NEK10Q6ZWH5 1172 aa17.25■□□□□ 0.35
PTCH1-201ENST00000331920 CDH24Q86UP0 819 aa17.25■□□□□ 0.35
PTCH1-201ENST00000331920 SHCBP1Q8NEM2 672 aa17.25■□□□□ 0.35
PTCH1-201ENST00000331920 IL17RAQ96F46 866 aa17.25■□□□□ 0.35
PTCH1-201ENST00000331920 SNF8Q96H20 258 aa17.25■□□□□ 0.35
PTCH1-201ENST00000331920 DHX36Q9H2U1 1008 aaKnown RBP17.25■□□□□ 0.35
PTCH1-201ENST00000331920 THAP9Q9H5L6 903 aa17.25■□□□□ 0.35
PTCH1-201ENST00000331920 ZFATQ9P243 1243 aa17.25■□□□□ 0.35
PTCH1-201ENST00000331920 ZMYND8Q9ULU4 1186 aaPredicted RBP17.25■□□□□ 0.35
PTCH1-201ENST00000331920 LOC102724159A0A0B4J2E5 919 aa17.25■□□□□ 0.35
PTCH1-201ENST00000331920 PARNO95453 639 aaKnown RBP17.25■□□□□ 0.35
PTCH1-201ENST00000331920 CYBBP04839 570 aa17.25■□□□□ 0.35
PTCH1-201ENST00000331920 IREB2P48200 963 aaKnown RBP17.25■□□□□ 0.35
PTCH1-201ENST00000331920 NR1H3Q13133 447 aa17.25■□□□□ 0.35
PTCH1-201ENST00000331920 ARHGEF7Q14155 803 aa17.25■□□□□ 0.35
PTCH1-201ENST00000331920 PWP2Q15269 919 aaKnown RBP17.25■□□□□ 0.35
PTCH1-201ENST00000331920 MAPK6Q16659 721 aa17.25■□□□□ 0.35
PTCH1-201ENST00000331920 ZNF304Q9HCX3 659 aa17.25■□□□□ 0.35
PTCH1-201ENST00000331920 TOPORSQ9NS56 1045 aaPredicted RBP17.25■□□□□ 0.35
PTCH1-201ENST00000331920 TRIM16LQ309B1 348 aa17.24■□□□□ 0.35
PTCH1-201ENST00000331920 ARAP1Q96P48 1450 aa17.24■□□□□ 0.35
PTCH1-201ENST00000331920 ATP8B1O43520 1251 aa17.24■□□□□ 0.35
PTCH1-201ENST00000331920 TMC5Q6UXY8 1006 aa17.24■□□□□ 0.35
PTCH1-201ENST00000331920 STAMBPL1Q96FJ0 436 aa17.24■□□□□ 0.35
PTCH1-201ENST00000331920 ATP6V1HQ9UI12 483 aa17.24■□□□□ 0.35
PTCH1-201ENST00000331920 ADORA1P30542 326 aa17.24■□□□□ 0.35
PTCH1-201ENST00000331920 ICE2Q659A1 982 aa17.24■□□□□ 0.35
PTCH1-201ENST00000331920 GLYCTKQ8IVS8 523 aa17.24■□□□□ 0.35
PTCH1-201ENST00000331920 WNK4Q96J92 1243 aa17.24■□□□□ 0.35
PTCH1-201ENST00000331920 RPRD1BQ9NQG5 326 aaKnown RBP17.24■□□□□ 0.35
PTCH1-201ENST00000331920 ZNF500O60304 480 aaPredicted RBP17.24■□□□□ 0.35
PTCH1-201ENST00000331920 PPP6R2O75170 966 aa17.24■□□□□ 0.35
PTCH1-201ENST00000331920 PGK2P07205 417 aa17.24■□□□□ 0.35
PTCH1-201ENST00000331920 CDH6P55285 790 aa17.24■□□□□ 0.35
PTCH1-201ENST00000331920 CYFIP1Q7L576 1253 aa17.24■□□□□ 0.35
PTCH1-201ENST00000331920 CDYLQ9Y232 598 aa17.24■□□□□ 0.35
PTCH1-201ENST00000331920 TNRQ92752 1358 aa17.24■□□□□ 0.35
PTCH1-201ENST00000331920 AP3B1O00203 1094 aa17.24■□□□□ 0.35
PTCH1-201ENST00000331920 RBBP4Q09028 425 aa17.24■□□□□ 0.35
PTCH1-201ENST00000331920 SFR1Q86XK3 245 aa17.24■□□□□ 0.35
PTCH1-201ENST00000331920 E9PBE3 544 aa17.24■□□□□ 0.35
PTCH1-201ENST00000331920 STXBP3O00186 592 aa17.24■□□□□ 0.35
PTCH1-201ENST00000331920 LDHAP00338 332 aaKnown RBP17.24■□□□□ 0.35
PTCH1-201ENST00000331920 APRTP07741 180 aa17.24■□□□□ 0.35
PTCH1-201ENST00000331920 HSPA2P54652 639 aa17.24■□□□□ 0.35
PTCH1-201ENST00000331920 POMGNT2Q8NAT1 580 aa17.24■□□□□ 0.35
PTCH1-201ENST00000331920 ZNF496Q96IT1 587 aaPredicted RBP17.24■□□□□ 0.35
PTCH1-201ENST00000331920 CNDP1Q96KN2 507 aa17.24■□□□□ 0.35
PTCH1-201ENST00000331920 ZBTB39O15060 712 aa17.23■□□□□ 0.35
PTCH1-201ENST00000331920 IP6K1Q92551 441 aa17.23■□□□□ 0.35
PTCH1-201ENST00000331920 C14orf93Q9H972 538 aaKnown RBP17.23■□□□□ 0.35
PTCH1-201ENST00000331920 KRCC1Q9NPI7 259 aaPredicted RBP17.23■□□□□ 0.35
PTCH1-201ENST00000331920 ADAM21Q9UKJ8 722 aa17.23■□□□□ 0.35
PTCH1-201ENST00000331920 MYBL1P10243 752 aa17.23■□□□□ 0.35
PTCH1-201ENST00000331920 SULT1E1P49888 294 aa17.23■□□□□ 0.35
PTCH1-201ENST00000331920 ZSWIM7Q19AV6 140 aa17.23■□□□□ 0.35
PTCH1-201ENST00000331920 NLRP11P59045 1033 aaKnown RBP17.23■□□□□ 0.35
PTCH1-201ENST00000331920 TPI1P60174 286 aa17.23■□□□□ 0.35
PTCH1-201ENST00000331920 MKRN4PQ13434 485 aaPredicted RBP17.23■□□□□ 0.35
PTCH1-201ENST00000331920 CYFIP2Q96F07 1278 aa17.23■□□□□ 0.35
PTCH1-201ENST00000331920 TRIM62Q9BVG3 475 aa17.23■□□□□ 0.35
PTCH1-201ENST00000331920 STAP1Q9ULZ2 295 aa17.23■□□□□ 0.35
PTCH1-201ENST00000331920 MTMR6Q9Y217 621 aa17.23■□□□□ 0.35
PTCH1-201ENST00000331920 A0A087X0T9 212 aa17.23■□□□□ 0.35
PTCH1-201ENST00000331920 BCAR1P56945 870 aa17.23■□□□□ 0.35
PTCH1-201ENST00000331920 MTMR1Q13613 665 aa17.23■□□□□ 0.35
PTCH1-201ENST00000331920 SH3TC2Q8TF17 1288 aa17.23■□□□□ 0.35
PTCH1-201ENST00000331920 TASP1Q9H6P5 420 aa17.23■□□□□ 0.35
PTCH1-201ENST00000331920 KLC4Q9NSK0 619 aa17.23■□□□□ 0.35
PTCH1-201ENST00000331920 UPP2O95045 317 aa17.23■□□□□ 0.35
PTCH1-201ENST00000331920 CAV1Q03135 178 aa17.23■□□□□ 0.35
PTCH1-201ENST00000331920 CSTF3Q12996 717 aaKnown RBP17.23■□□□□ 0.35
PTCH1-201ENST00000331920 NLRP14Q86W24 1093 aa17.23■□□□□ 0.35
PTCH1-201ENST00000331920 SKAP2O75563 359 aaPredicted RBP17.23■□□□□ 0.35
PTCH1-201ENST00000331920 TFDP2Q14188 446 aa17.23■□□□□ 0.35
PTCH1-201ENST00000331920 OTOAQ7RTW8 1153 aa17.23■□□□□ 0.35
PTCH1-201ENST00000331920 TMEM35BQ8NCS4 154 aa17.23■□□□□ 0.35
PTCH1-201ENST00000331920 PNKPQ96T60 521 aa17.23■□□□□ 0.35
PTCH1-201ENST00000331920 EFCAB5A4FU69 1503 aa17.23■□□□□ 0.35
PTCH1-201ENST00000331920 ESYT3A0FGR9 886 aa17.22■□□□□ 0.35
PTCH1-201ENST00000331920 F8W810 466 aa17.22■□□□□ 0.35
PTCH1-201ENST00000331920 DNALI1O14645 258 aaPredicted RBP17.22■□□□□ 0.35
PTCH1-201ENST00000331920 NCK2O43639 380 aa17.22■□□□□ 0.35
PTCH1-201ENST00000331920 PHKA2P46019 1235 aa17.22■□□□□ 0.35
PTCH1-201ENST00000331920 IZUMO1Q8IYV9 350 aa17.22■□□□□ 0.35
PTCH1-201ENST00000331920 MAP3K1Q13233 1512 aa17.22■□□□□ 0.35
PTCH1-201ENST00000331920 ABCB11O95342 1321 aa17.22■□□□□ 0.35
PTCH1-201ENST00000331920 AGRPO00253 132 aa17.22■□□□□ 0.35
PTCH1-201ENST00000331920 RC3H1Q5TC82 1133 aaKnown RBP17.22■□□□□ 0.35
PTCH1-201ENST00000331920 PTRHD1Q6GMV3 140 aaKnown RBP17.22■□□□□ 0.35
PTCH1-201ENST00000331920 ASAP3Q8TDY4 903 aa17.22■□□□□ 0.35
PTCH1-201ENST00000331920 BHMTQ93088 406 aa17.22■□□□□ 0.35
PTCH1-201ENST00000331920 OSBPL6Q9BZF3 934 aa17.22■□□□□ 0.35
PTCH1-201ENST00000331920 BHMT2Q9H2M3 363 aa17.22■□□□□ 0.35
Retrieved 100 of 20,778 RNA–protein pairs in 47.2 ms