RNA–Protein interactions for RNA: ENST00000305866.9

VPS50-202, Transcript of VPS50, EARP/GARPII complex subunit, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene VPS50, Length 3,613 nt, Biotype protein coding, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS50-202ENST00000305866 SLFN13Q68D06 897 aa5.84□□□□□ -1.47
VPS50-202ENST00000305866 SLC39A4Q6P5W5 647 aa5.84□□□□□ -1.47
VPS50-202ENST00000305866 MAATS1Q7Z4T9 603 aa5.84□□□□□ -1.47
VPS50-202ENST00000305866 FAM160B2Q86V87 743 aa5.84□□□□□ -1.47
VPS50-202ENST00000305866 GPBP1Q86WP2 473 aa5.84□□□□□ -1.47
VPS50-202ENST00000305866 ARFGAP2Q8N6H7 521 aa5.84□□□□□ -1.47
VPS50-202ENST00000305866 GLIS1Q8NBF1 620 aa5.84□□□□□ -1.47
VPS50-202ENST00000305866 FAM13CQ8NE31 585 aa5.84□□□□□ -1.47
VPS50-202ENST00000305866 MICAL1Q8TDZ2 1067 aa5.84□□□□□ -1.47
VPS50-202ENST00000305866 KAT5Q92993 513 aa5.84□□□□□ -1.47
VPS50-202ENST00000305866 PRR11Q96HE9 360 aaPredicted RBP5.84□□□□□ -1.47
VPS50-202ENST00000305866 BATF3Q9NR55 127 aa5.84□□□□□ -1.47
VPS50-202ENST00000305866 BMP2KQ9NSY1 1161 aaPredicted RBP5.84□□□□□ -1.47
VPS50-202ENST00000305866 TMOD4Q9NZQ9 345 aa5.84□□□□□ -1.47
VPS50-202ENST00000305866 TRAF5O00463 557 aa5.84□□□□□ -1.47
VPS50-202ENST00000305866 ABLIM1O14639 778 aa5.84□□□□□ -1.47
VPS50-202ENST00000305866 KIF3CO14782 793 aa5.84□□□□□ -1.47
VPS50-202ENST00000305866 SORBS3O60504 671 aa5.84□□□□□ -1.47
VPS50-202ENST00000305866 CTNND1O60716 968 aaKnown RBP5.84□□□□□ -1.47
VPS50-202ENST00000305866 IPO7O95373 1038 aaKnown RBP5.84□□□□□ -1.47
VPS50-202ENST00000305866 NPTXRO95502 500 aa5.84□□□□□ -1.47
VPS50-202ENST00000305866 SLC8A1P32418 973 aa5.84□□□□□ -1.47
VPS50-202ENST00000305866 ABCD1P33897 745 aa5.84□□□□□ -1.47
VPS50-202ENST00000305866 MSH2P43246 934 aa5.84□□□□□ -1.47
VPS50-202ENST00000305866 ETV4P43268 484 aa5.84□□□□□ -1.47
VPS50-202ENST00000305866 WNT7BP56706 349 aa5.84□□□□□ -1.47
VPS50-202ENST00000305866 ZNF211Q13398 564 aaPredicted RBP5.84□□□□□ -1.47
VPS50-202ENST00000305866 LBRQ14739 615 aaKnown RBP5.84□□□□□ -1.47
VPS50-202ENST00000305866 DRAP1Q14919 205 aaPredicted RBP5.84□□□□□ -1.47
VPS50-202ENST00000305866 EXOC3L4Q17RC7 722 aa5.84□□□□□ -1.47
VPS50-202ENST00000305866 SLC13A5Q86YT5 568 aaPredicted RBP5.84□□□□□ -1.47
VPS50-202ENST00000305866 NELFCDQ8IXH7 590 aa5.84□□□□□ -1.47
VPS50-202ENST00000305866 SEPT12Q8IYM1 358 aa5.84□□□□□ -1.47
VPS50-202ENST00000305866 LRRC47Q8N1G4 583 aaKnown RBP5.84□□□□□ -1.47
VPS50-202ENST00000305866 ZFAND2BQ8WV99 257 aa5.84□□□□□ -1.47
VPS50-202ENST00000305866 SPOCK2Q92563 424 aa5.84□□□□□ -1.47
VPS50-202ENST00000305866 ZNF333Q96JL9 665 aa5.84□□□□□ -1.47
VPS50-202ENST00000305866 ANKRD27Q96NW4 1050 aa5.84□□□□□ -1.47
VPS50-202ENST00000305866 WDR11Q9BZH6 1224 aa5.84□□□□□ -1.47
VPS50-202ENST00000305866 NINJ2Q9NZG7 142 aa5.84□□□□□ -1.47
VPS50-202ENST00000305866 APEX2Q9UBZ4 518 aa5.84□□□□□ -1.47
VPS50-202ENST00000305866 DNM3Q9UQ16 869 aa5.84□□□□□ -1.47
VPS50-202ENST00000305866 STARD13Q9Y3M8 1113 aa5.84□□□□□ -1.47
VPS50-202ENST00000305866 PCDHA1Q9Y5I3 950 aa5.84□□□□□ -1.47
VPS50-202ENST00000305866 OTOFQ9HC10 1997 aa5.84□□□□□ -1.48
VPS50-202ENST00000305866 SPDYE3A6NKU9 549 aa5.84□□□□□ -1.48
VPS50-202ENST00000305866 CAPN14A8MX76 684 aa5.84□□□□□ -1.48
VPS50-202ENST00000305866 CHRNA3P32297 505 aa5.84□□□□□ -1.48
VPS50-202ENST00000305866 PRELPP51888 382 aa5.84□□□□□ -1.48
VPS50-202ENST00000305866 GTF2IP78347 998 aa5.84□□□□□ -1.48
VPS50-202ENST00000305866 ZC2HC1CQ53FD0 456 aaPredicted RBP5.84□□□□□ -1.48
VPS50-202ENST00000305866 CCDC70Q6NSX1 233 aa5.84□□□□□ -1.48
VPS50-202ENST00000305866 BICDL1Q6ZP65 573 aa5.84□□□□□ -1.48
VPS50-202ENST00000305866 KSR1Q8IVT5 923 aa5.84□□□□□ -1.48
VPS50-202ENST00000305866 SHKBP1Q8TBC3 707 aa5.84□□□□□ -1.48
VPS50-202ENST00000305866 CLEC4DQ8WXI8 215 aa5.84□□□□□ -1.48
VPS50-202ENST00000305866 SHC3Q92529 594 aa5.84□□□□□ -1.48
VPS50-202ENST00000305866 SKA1Q96BD8 255 aa5.84□□□□□ -1.48
VPS50-202ENST00000305866 MAGEB18Q96M61 343 aa5.84□□□□□ -1.48
VPS50-202ENST00000305866 PHACTR1Q9C0D0 580 aa5.84□□□□□ -1.48
VPS50-202ENST00000305866 RAB17Q9H0T7 212 aa5.84□□□□□ -1.48
VPS50-202ENST00000305866 ECT2Q9H8V3 914 aa5.84□□□□□ -1.48
VPS50-202ENST00000305866 AGPAT3Q9NRZ7 376 aa5.84□□□□□ -1.48
VPS50-202ENST00000305866 KRT82Q9NSB4 513 aa5.84□□□□□ -1.48
VPS50-202ENST00000305866 HOMER3Q9NSC5 361 aa5.84□□□□□ -1.48
VPS50-202ENST00000305866 FGFR1OP2Q9NVK5 253 aa5.84□□□□□ -1.48
VPS50-202ENST00000305866 GCNT4Q9P109 453 aa5.84□□□□□ -1.48
VPS50-202ENST00000305866 ARMCX3Q9UH62 379 aaPredicted RBP5.84□□□□□ -1.48
VPS50-202ENST00000305866 JAG2Q9Y219 1238 aa5.84□□□□□ -1.48
VPS50-202ENST00000305866 FARP1Q9Y4F1 1045 aaPredicted RBP5.84□□□□□ -1.48
VPS50-202ENST00000305866 DICER1Q9UPY3 1922 aaKnown RBP5.83□□□□□ -1.48
VPS50-202ENST00000305866 A0A1W2PRG0 241 aa5.83□□□□□ -1.48
VPS50-202ENST00000305866 TISP43B9A030 160 aa5.83□□□□□ -1.48
VPS50-202ENST00000305866 USP17L15C9J2P7 530 aa5.83□□□□□ -1.48
VPS50-202ENST00000305866 USP17L13C9JLJ4 530 aa5.83□□□□□ -1.48
VPS50-202ENST00000305866 USP17L11C9JVI0 530 aa5.83□□□□□ -1.48
VPS50-202ENST00000305866 USP17L18D6R9N7 530 aa5.83□□□□□ -1.48
VPS50-202ENST00000305866 USP17L22D6RA61 530 aa5.83□□□□□ -1.48
VPS50-202ENST00000305866 USP17L17D6RBQ6 530 aa5.83□□□□□ -1.48
VPS50-202ENST00000305866 USP17L19D6RCP7 530 aa5.83□□□□□ -1.48
VPS50-202ENST00000305866 USP17L20D6RJB6 530 aa5.83□□□□□ -1.48
VPS50-202ENST00000305866 ATP2A1O14983 1001 aa5.83□□□□□ -1.48
VPS50-202ENST00000305866 BUD23O43709 281 aaKnown RBP5.83□□□□□ -1.48
VPS50-202ENST00000305866 ZC3H11AO75152 810 aaKnown RBP eCLIP5.83□□□□□ -1.48
VPS50-202ENST00000305866 TTC4O95801 387 aa5.83□□□□□ -1.48
VPS50-202ENST00000305866 PIGRP01833 764 aa5.83□□□□□ -1.48
VPS50-202ENST00000305866 ABHD2P08910 425 aa5.83□□□□□ -1.48
VPS50-202ENST00000305866 PTPN7P35236 360 aa5.83□□□□□ -1.48
VPS50-202ENST00000305866 PSMC2P35998 433 aaKnown RBP5.83□□□□□ -1.48
VPS50-202ENST00000305866 PPARDQ03181 441 aa5.83□□□□□ -1.48
VPS50-202ENST00000305866 USP17L24Q0WX57 530 aa5.83□□□□□ -1.48
VPS50-202ENST00000305866 E2F5Q15329 346 aa5.83□□□□□ -1.48
VPS50-202ENST00000305866 CERKLQ49MI3 558 aaPredicted RBP5.83□□□□□ -1.48
VPS50-202ENST00000305866 C6orf118Q5T5N4 469 aa5.83□□□□□ -1.48
VPS50-202ENST00000305866 CCDC181Q5TID7 509 aa5.83□□□□□ -1.48
VPS50-202ENST00000305866 PCNX4Q63HM2 1172 aa5.83□□□□□ -1.48
VPS50-202ENST00000305866 USP17L6PQ6QN14 398 aa5.83□□□□□ -1.48
VPS50-202ENST00000305866 SLC30A10Q6XR72 485 aa5.83□□□□□ -1.48
VPS50-202ENST00000305866 CCDC121Q6ZUS5 278 aa5.83□□□□□ -1.48
VPS50-202ENST00000305866 FBXO11Q86XK2 927 aa5.83□□□□□ -1.48
Retrieved 100 of 20,778 RNA–protein pairs in 45.3 ms