RNA–Protein interactions for RNA: ENST00000262215.7

ARFGEF1-201, Transcript of ADP ribosylation factor guanine nucleotide exchange factor 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene ARFGEF1, Length 7,225 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ARFGEF1-201ENST00000262215 LOC100653049A0A140TA62 436 aa13.12□□□□□ -0.31
ARFGEF1-201ENST00000262215 POTECB2RU33 542 aa13.12□□□□□ -0.31
ARFGEF1-201ENST00000262215 RASSF9O75901 435 aa13.12□□□□□ -0.31
ARFGEF1-201ENST00000262215 KRT34O76011 436 aa13.12□□□□□ -0.31
ARFGEF1-201ENST00000262215 PRR29P0C7W0 189 aa13.12□□□□□ -0.31
ARFGEF1-201ENST00000262215 ATP12AP54707 1039 aa13.12□□□□□ -0.31
ARFGEF1-201ENST00000262215 EIF3EP60228 445 aaKnown RBP13.12□□□□□ -0.31
ARFGEF1-201ENST00000262215 KRT39Q6A163 491 aa13.12□□□□□ -0.31
ARFGEF1-201ENST00000262215 SLC30A5Q8TAD4 765 aa13.12□□□□□ -0.31
ARFGEF1-201ENST00000262215 TOPORSQ9NS56 1045 aaPredicted RBP13.12□□□□□ -0.31
ARFGEF1-201ENST00000262215 PCMTD2Q9NV79 361 aa13.12□□□□□ -0.31
ARFGEF1-201ENST00000262215 KIF14Q15058 1648 aa13.11□□□□□ -0.31
ARFGEF1-201ENST00000262215 PNMA6FA0A0J9YX94 578 aa13.11□□□□□ -0.31
ARFGEF1-201ENST00000262215 SMNDC1O75940 238 aaKnown RBP eCLIP13.11□□□□□ -0.31
ARFGEF1-201ENST00000262215 LDHAP00338 332 aaKnown RBP13.11□□□□□ -0.31
ARFGEF1-201ENST00000262215 APRTP07741 180 aa13.11□□□□□ -0.31
ARFGEF1-201ENST00000262215 PRCPP42785 496 aa13.11□□□□□ -0.31
ARFGEF1-201ENST00000262215 LRRC63Q05C16 580 aa13.11□□□□□ -0.31
ARFGEF1-201ENST00000262215 RC3H1Q5TC82 1133 aaKnown RBP13.11□□□□□ -0.31
ARFGEF1-201ENST00000262215 DHX30Q7L2E3 1194 aaKnown RBP eCLIP13.11□□□□□ -0.31
ARFGEF1-201ENST00000262215 OSBP2Q969R2 916 aa13.11□□□□□ -0.31
ARFGEF1-201ENST00000262215 ASAP2O43150 1006 aa13.11□□□□□ -0.31
ARFGEF1-201ENST00000262215 HIST1H2AGP0C0S8 130 aaPredicted RBP13.11□□□□□ -0.31
ARFGEF1-201ENST00000262215 HIST1H2ADP20671 130 aa13.11□□□□□ -0.31
ARFGEF1-201ENST00000262215 ZNF614Q8N883 585 aa13.11□□□□□ -0.31
ARFGEF1-201ENST00000262215 HIST1H2AHQ96KK5 128 aa13.11□□□□□ -0.31
ARFGEF1-201ENST00000262215 HIST1H2AJQ99878 128 aa13.11□□□□□ -0.31
ARFGEF1-201ENST00000262215 H2AFJQ9BTM1 129 aa13.11□□□□□ -0.31
ARFGEF1-201ENST00000262215 PARVBQ9HBI1 364 aa13.11□□□□□ -0.31
ARFGEF1-201ENST00000262215 AGRPO00253 132 aa13.11□□□□□ -0.31
ARFGEF1-201ENST00000262215 CALB1P05937 261 aa13.11□□□□□ -0.31
ARFGEF1-201ENST00000262215 PRG3Q9Y2Y8 225 aaPredicted RBP13.11□□□□□ -0.31
ARFGEF1-201ENST00000262215 CCDC22O60826 627 aa13.11□□□□□ -0.31
ARFGEF1-201ENST00000262215 PCCAP05165 728 aaPredicted RBP13.11□□□□□ -0.31
ARFGEF1-201ENST00000262215 MZF1P28698 734 aaPredicted RBP13.11□□□□□ -0.31
ARFGEF1-201ENST00000262215 ADD2P35612 726 aa13.11□□□□□ -0.31
ARFGEF1-201ENST00000262215 VAMP7P51809 220 aa13.11□□□□□ -0.31
ARFGEF1-201ENST00000262215 TRIM71Q2Q1W2 868 aaKnown RBP13.11□□□□□ -0.31
ARFGEF1-201ENST00000262215 RAB42Q8N4Z0 105 aa13.11□□□□□ -0.31
ARFGEF1-201ENST00000262215 KIF12Q96FN5 646 aa13.11□□□□□ -0.31
ARFGEF1-201ENST00000262215 MRPS26Q9BYN8 205 aaKnown RBP13.11□□□□□ -0.31
ARFGEF1-201ENST00000262215 TASP1Q9H6P5 420 aa13.11□□□□□ -0.31
ARFGEF1-201ENST00000262215 STAP1Q9ULZ2 295 aa13.11□□□□□ -0.31
ARFGEF1-201ENST00000262215 POTEFA5A3E0 1075 aa13.11□□□□□ -0.31
ARFGEF1-201ENST00000262215 NMT2O60551 498 aa13.11□□□□□ -0.31
ARFGEF1-201ENST00000262215 POTEIP0CG38 1075 aa13.11□□□□□ -0.31
ARFGEF1-201ENST00000262215 CYP2C19P33261 490 aa13.11□□□□□ -0.31
ARFGEF1-201ENST00000262215 ETFBP38117 255 aa13.11□□□□□ -0.31
ARFGEF1-201ENST00000262215 SULT1E1P49888 294 aa13.11□□□□□ -0.31
ARFGEF1-201ENST00000262215 NCALDP61601 193 aa13.11□□□□□ -0.31
ARFGEF1-201ENST00000262215 POTEGQ6S5H5 508 aa13.11□□□□□ -0.31
ARFGEF1-201ENST00000262215 POTEEQ6S8J3 1075 aa13.11□□□□□ -0.31
ARFGEF1-201ENST00000262215 PABPC5Q96DU9 382 aaKnown RBP13.11□□□□□ -0.31
ARFGEF1-201ENST00000262215 PNKPQ96T60 521 aa13.11□□□□□ -0.31
ARFGEF1-201ENST00000262215 FANCAO15360 1455 aa13.11□□□□□ -0.31
ARFGEF1-201ENST00000262215 IFT140Q96RY7 1462 aa13.1□□□□□ -0.31
ARFGEF1-201ENST00000262215 APOL1O14791 398 aa13.1□□□□□ -0.31
ARFGEF1-201ENST00000262215 NBPF9Q3BBW0 867 aa13.1□□□□□ -0.31
ARFGEF1-201ENST00000262215 XXYLT1Q8NBI6 393 aa13.1□□□□□ -0.31
ARFGEF1-201ENST00000262215 DEPDC7Q96QD5 511 aa13.1□□□□□ -0.31
ARFGEF1-201ENST00000262215 GCOM2Q9BZD3 368 aaPredicted RBP13.1□□□□□ -0.31
ARFGEF1-201ENST00000262215 FAM96AQ9H5X1 160 aa13.1□□□□□ -0.31
ARFGEF1-201ENST00000262215 TBC1D23Q9NUY8 699 aa13.1□□□□□ -0.31
ARFGEF1-201ENST00000262215 CEP72Q9P209 647 aa13.1□□□□□ -0.31
ARFGEF1-201ENST00000262215 RSPH10B2B2RC85 870 aa13.1□□□□□ -0.31
ARFGEF1-201ENST00000262215 GRAP2O75791 330 aa13.1□□□□□ -0.31
ARFGEF1-201ENST00000262215 RSPH10BP0C881 870 aa13.1□□□□□ -0.31
ARFGEF1-201ENST00000262215 MEI1Q5TIA1 1274 aa13.1□□□□□ -0.31
ARFGEF1-201ENST00000262215 FAM196AQ6ZSG2 479 aa13.1□□□□□ -0.31
ARFGEF1-201ENST00000262215 FHDC1Q9C0D6 1143 aaPredicted RBP13.1□□□□□ -0.31
ARFGEF1-201ENST00000262215 PAPOLBQ9NRJ5 636 aaKnown RBP13.1□□□□□ -0.31
ARFGEF1-201ENST00000262215 NSMCE4AQ9NXX6 385 aa13.1□□□□□ -0.31
ARFGEF1-201ENST00000262215 PI4KBQ9UBF8 816 aa13.1□□□□□ -0.31
ARFGEF1-201ENST00000262215 PHF20L1A8MW92 1017 aa13.1□□□□□ -0.31
ARFGEF1-201ENST00000262215 IREB2P48200 963 aaKnown RBP13.1□□□□□ -0.31
ARFGEF1-201ENST00000262215 GTF2H3Q13889 308 aa13.1□□□□□ -0.31
ARFGEF1-201ENST00000262215 USP10Q14694 798 aaKnown RBP13.1□□□□□ -0.31
ARFGEF1-201ENST00000262215 SLC44A4Q53GD3 710 aa13.1□□□□□ -0.31
ARFGEF1-201ENST00000262215 CCDC60Q8IWA6 550 aaPredicted RBP13.1□□□□□ -0.31
ARFGEF1-201ENST00000262215 IL17REQ8NFR9 667 aa13.1□□□□□ -0.31
ARFGEF1-201ENST00000262215 CCT7Q99832 543 aa13.1□□□□□ -0.31
ARFGEF1-201ENST00000262215 INTS2Q9H0H0 1204 aaKnown RBP13.1□□□□□ -0.31
ARFGEF1-201ENST00000262215 TRABDQ9H4I3 376 aa13.1□□□□□ -0.31
ARFGEF1-201ENST00000262215 PAIP2BQ9ULR5 123 aaKnown RBP13.1□□□□□ -0.31
ARFGEF1-201ENST00000262215 PP2D1A8MPX8 630 aa13.1□□□□□ -0.31
ARFGEF1-201ENST00000262215 SERPINB1P30740 379 aa13.1□□□□□ -0.31
ARFGEF1-201ENST00000262215 FLT3P36888 993 aa13.1□□□□□ -0.31
ARFGEF1-201ENST00000262215 RAB14P61106 215 aa13.1□□□□□ -0.31
ARFGEF1-201ENST00000262215 TRIP10Q15642 601 aa13.1□□□□□ -0.31
ARFGEF1-201ENST00000262215 MRPL1Q9BYD6 325 aaKnown RBP13.1□□□□□ -0.31
ARFGEF1-201ENST00000262215 IP6K2Q9UHH9 426 aa13.1□□□□□ -0.31
ARFGEF1-201ENST00000262215 RAD51Q06609 339 aa13.1□□□□□ -0.31
ARFGEF1-201ENST00000262215 ITPRIPL1Q6GPH6 555 aa13.1□□□□□ -0.31
ARFGEF1-201ENST00000262215 CAAP1Q9H8G2 361 aa13.1□□□□□ -0.31
ARFGEF1-201ENST00000262215 SPASTQ9UBP0 616 aa13.1□□□□□ -0.31
ARFGEF1-201ENST00000262215 GABBR1Q9UBS5 961 aa13.1□□□□□ -0.31
ARFGEF1-201ENST00000262215 PHKA2P46019 1235 aa13.1□□□□□ -0.31
ARFGEF1-201ENST00000262215 RPS7P62081 194 aaKnown RBP13.1□□□□□ -0.31
ARFGEF1-201ENST00000262215 ZHX2Q9Y6X8 837 aa13.1□□□□□ -0.31
ARFGEF1-201ENST00000262215 KDM5BQ9UGL1 1544 aa13.09□□□□□ -0.31
Retrieved 100 of 20,778 RNA–protein pairs in 24.4 ms