RNA–Protein interactions for RNA: ENST00000256443.7

CDK7-201, Transcript of cyclin dependent kinase 7, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CDK7, Length 1,439 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDK7-201ENST00000256443 BCL7CQ8WUZ0 217 aaPredicted RBP14.09□□□□□ -0.15
CDK7-201ENST00000256443 CHAMP1Q96JM3 812 aa14.09□□□□□ -0.15
CDK7-201ENST00000256443 SNX27Q96L92 541 aa14.09□□□□□ -0.15
CDK7-201ENST00000256443 PPP1R10Q96QC0 940 aaKnown RBP14.09□□□□□ -0.15
CDK7-201ENST00000256443 TLE6Q9H808 572 aa14.09□□□□□ -0.15
CDK7-201ENST00000256443 TMEM206Q9H813 350 aa14.09□□□□□ -0.15
CDK7-201ENST00000256443 PLEKHA5Q9HAU0 1116 aa14.09□□□□□ -0.15
CDK7-201ENST00000256443 MARCH5Q9NX47 278 aa14.09□□□□□ -0.15
CDK7-201ENST00000256443 CLDND1Q9NY35 253 aa14.09□□□□□ -0.15
CDK7-201ENST00000256443 CNTN3Q9P232 1028 aa14.09□□□□□ -0.15
CDK7-201ENST00000256443 SERTAD1Q9UHV2 236 aa14.09□□□□□ -0.15
CDK7-201ENST00000256443 SSX2IPQ9Y2D8 614 aa14.09□□□□□ -0.15
CDK7-201ENST00000256443 STYXL1Q9Y6J8 313 aa14.09□□□□□ -0.15
CDK7-201ENST00000256443 A0A0B4J269 797 aa14.08□□□□□ -0.15
CDK7-201ENST00000256443 PVALEFA0A1B0GWK0 134 aa14.08□□□□□ -0.15
CDK7-201ENST00000256443 SRGAP2BP0DMP2 458 aa14.08□□□□□ -0.15
CDK7-201ENST00000256443 KCNE1P15382 129 aa14.08□□□□□ -0.15
CDK7-201ENST00000256443 SYKP43405 635 aa14.08□□□□□ -0.15
CDK7-201ENST00000256443 HSP90AA2PQ14568 343 aaPredicted RBP14.08□□□□□ -0.15
CDK7-201ENST00000256443 NAB2Q15742 525 aa14.08□□□□□ -0.15
CDK7-201ENST00000256443 DUSP6Q16828 381 aa14.08□□□□□ -0.15
CDK7-201ENST00000256443 CTC1Q2NKJ3 1217 aa14.08□□□□□ -0.15
CDK7-201ENST00000256443 TJAP1Q5JTD0 557 aa14.08□□□□□ -0.15
CDK7-201ENST00000256443 ADGRD2Q7Z7M1 963 aa14.08□□□□□ -0.15
CDK7-201ENST00000256443 MRPL43Q8N983 215 aaKnown RBP14.08□□□□□ -0.15
CDK7-201ENST00000256443 ASB2Q96Q27 587 aa14.08□□□□□ -0.15
CDK7-201ENST00000256443 TSPAN18Q96SJ8 248 aa14.08□□□□□ -0.15
CDK7-201ENST00000256443 MSTO1Q9BUK6 570 aa14.08□□□□□ -0.15
CDK7-201ENST00000256443 HERC2P3Q9BVR0 1158 aa14.08□□□□□ -0.15
CDK7-201ENST00000256443 IGFLR1Q9H665 355 aa14.08□□□□□ -0.15
CDK7-201ENST00000256443 TBC1D7Q9P0N9 293 aa14.08□□□□□ -0.15
CDK7-201ENST00000256443 ADAM28Q9UKQ2 775 aa14.08□□□□□ -0.15
CDK7-201ENST00000256443 SMIM28A0A1B0GU29 152 aa14.07□□□□□ -0.16
CDK7-201ENST00000256443 GOLGA6L4A6NEF3 574 aa14.07□□□□□ -0.16
CDK7-201ENST00000256443 C2orf71A6NGG8 1288 aa14.07□□□□□ -0.16
CDK7-201ENST00000256443 ACTN4O43707 911 aaKnown RBP14.07□□□□□ -0.16
CDK7-201ENST00000256443 TADA2AO75478 443 aa14.07□□□□□ -0.16
CDK7-201ENST00000256443 CXCL14O95715 111 aa14.07□□□□□ -0.16
CDK7-201ENST00000256443 CA8P35219 290 aa14.07□□□□□ -0.16
CDK7-201ENST00000256443 AFMP43652 599 aa14.07□□□□□ -0.16
CDK7-201ENST00000256443 POU5F1Q01860 360 aaKnown RBP14.07□□□□□ -0.16
CDK7-201ENST00000256443 PPP2R3AQ06190 1150 aa14.07□□□□□ -0.16
CDK7-201ENST00000256443 ADAM15Q13444 863 aa14.07□□□□□ -0.16
CDK7-201ENST00000256443 PUS10Q3MIT2 529 aaKnown RBP14.07□□□□□ -0.16
CDK7-201ENST00000256443 GLRA4Q5JXX5 417 aa14.07□□□□□ -0.16
CDK7-201ENST00000256443 FAM26FQ5R3K3 315 aa14.07□□□□□ -0.16
CDK7-201ENST00000256443 FUT10Q6P4F1 479 aa14.07□□□□□ -0.16
CDK7-201ENST00000256443 SLC39A4Q6P5W5 647 aa14.07□□□□□ -0.16
CDK7-201ENST00000256443 EP400NLQ6ZTU2 488 aa14.07□□□□□ -0.16
CDK7-201ENST00000256443 RBM23Q86U06 439 aaKnown RBP14.07□□□□□ -0.16
CDK7-201ENST00000256443 CD302Q8IX05 232 aa14.07□□□□□ -0.16
CDK7-201ENST00000256443 RNF168Q8IYW5 571 aaPredicted RBP14.07□□□□□ -0.16
CDK7-201ENST00000256443 SYCP3Q8IZU3 236 aa14.07□□□□□ -0.16
CDK7-201ENST00000256443 TMEM87AQ8NBN3 555 aa14.07□□□□□ -0.16
CDK7-201ENST00000256443 DDX27Q96GQ7 796 aaKnown RBP14.07□□□□□ -0.16
CDK7-201ENST00000256443 CCDC34Q96HJ3 373 aa14.07□□□□□ -0.16
CDK7-201ENST00000256443 HAPLN2Q9GZV7 340 aa14.07□□□□□ -0.16
CDK7-201ENST00000256443 GDPD2Q9HCC8 539 aa14.07□□□□□ -0.16
CDK7-201ENST00000256443 PCDHGC5Q9Y5F6 944 aa14.07□□□□□ -0.16
CDK7-201ENST00000256443 SF3B1O75533 1304 aaKnown RBP eCLIP14.07□□□□□ -0.164e-6■■■■■ 75.9
CDK7-201ENST00000256443 ZC3H11BA0A1B0GUI2 810 aaPredicted RBP14.07□□□□□ -0.16
CDK7-201ENST00000256443 CASTOR2A6NHX0 329 aa14.07□□□□□ -0.16
CDK7-201ENST00000256443 HIDE1A8MVS5 230 aa14.07□□□□□ -0.16
CDK7-201ENST00000256443 ANKRD63C9JTQ0 380 aa14.07□□□□□ -0.16
CDK7-201ENST00000256443 TMEM189-UBE2V1I3L0A0 370 aa14.07□□□□□ -0.16
CDK7-201ENST00000256443 EIF3DO15371 548 aaKnown RBP eCLIP14.07□□□□□ -0.16
CDK7-201ENST00000256443 XPOTO43592 962 aaKnown RBP14.07□□□□□ -0.16
CDK7-201ENST00000256443 EFEMP2O95967 443 aa14.07□□□□□ -0.16
CDK7-201ENST00000256443 URODP06132 367 aa14.07□□□□□ -0.16
CDK7-201ENST00000256443 MYBP10242 640 aa14.07□□□□□ -0.16
CDK7-201ENST00000256443 KCNA5P22460 613 aa14.07□□□□□ -0.16
CDK7-201ENST00000256443 NDUFV1P49821 464 aa14.07□□□□□ -0.16
CDK7-201ENST00000256443 TFF2Q03403 129 aa14.07□□□□□ -0.16
CDK7-201ENST00000256443 ELAVL2Q12926 359 aaKnown RBP14.07□□□□□ -0.16
CDK7-201ENST00000256443 SLC10A6Q3KNW5 377 aa14.07□□□□□ -0.16
CDK7-201ENST00000256443 LEXMQ3ZCV2 418 aa14.07□□□□□ -0.16
CDK7-201ENST00000256443 GPR65Q8IYL9 337 aa14.07□□□□□ -0.16
CDK7-201ENST00000256443 FSIP1Q8NA03 581 aa14.07□□□□□ -0.16
CDK7-201ENST00000256443 POMGNT1Q8WZA1 660 aa14.07□□□□□ -0.16
CDK7-201ENST00000256443 PAGE5Q96GU1 130 aa14.07□□□□□ -0.16
CDK7-201ENST00000256443 VN1R3Q9BXE9 311 aa14.07□□□□□ -0.16
CDK7-201ENST00000256443 CXCL16Q9H2A7 254 aa14.07□□□□□ -0.16
CDK7-201ENST00000256443 RPF1Q9H9Y2 349 aaKnown RBP14.07□□□□□ -0.16
CDK7-201ENST00000256443 MRPL17Q9NRX2 175 aaKnown RBP14.07□□□□□ -0.16
CDK7-201ENST00000256443 AGO2Q9UKV8 859 aaKnown RBP14.07□□□□□ -0.16
CDK7-201ENST00000256443 UBE4BO95155 1302 aa14.06□□□□□ -0.16
CDK7-201ENST00000256443 TTC26A0AVF1 554 aa14.06□□□□□ -0.16
CDK7-201ENST00000256443 FAM189A1O60320 539 aa14.06□□□□□ -0.16
CDK7-201ENST00000256443 LDHAP00338 332 aaKnown RBP14.06□□□□□ -0.16
CDK7-201ENST00000256443 CXCL8P10145 99 aa14.06□□□□□ -0.16
CDK7-201ENST00000256443 GARTP22102 1010 aa14.06□□□□□ -0.16
CDK7-201ENST00000256443 RPL9P32969 192 aaKnown RBP14.06□□□□□ -0.16
CDK7-201ENST00000256443 GTF2F1P35269 517 aaKnown RBP eCLIP14.06□□□□□ -0.16
CDK7-201ENST00000256443 GLUD2P49448 558 aa14.06□□□□□ -0.16
CDK7-201ENST00000256443 CASP5P51878 434 aa14.06□□□□□ -0.16
CDK7-201ENST00000256443 NDUFA8P51970 172 aa14.06□□□□□ -0.16
CDK7-201ENST00000256443 EHHADHQ08426 723 aa14.06□□□□□ -0.16
CDK7-201ENST00000256443 CUL4BQ13620 913 aa14.06□□□□□ -0.16
CDK7-201ENST00000256443 PTPN14Q15678 1187 aa14.06□□□□□ -0.16
CDK7-201ENST00000256443 USP41Q3LFD5 358 aa14.06□□□□□ -0.16
Retrieved 100 of 20,778 RNA–protein pairs in 42.4 ms