RNA–Protein interactions for RNA: ENSMUST00000113706.9

Trim39-203, Transcript of E3 ubiquitin-protein ligase TRIM39, mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Trim39, Length 3,204 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Trim39-203ENSMUST00000113706 Olfr397Q8VEZ6 315 aa17.02■□□□□ 0.32
Trim39-203ENSMUST00000113706 Olfr458Q8VF80 313 aa17.02■□□□□ 0.32
Trim39-203ENSMUST00000113706 Olfr457Q8VGP5 313 aa17.02■□□□□ 0.32
Trim39-203ENSMUST00000113706 Med10Q9CXU0 135 aa17.02■□□□□ 0.32
Trim39-203ENSMUST00000113706 Zscan4-ps3A0A1B0GRH6 506 aa17.02■□□□□ 0.31
Trim39-203ENSMUST00000113706 Zscan4-ps2A0A1C7CYU6 506 aa17.02■□□□□ 0.31
Trim39-203ENSMUST00000113706 ProcP33587 460 aa17.02■□□□□ 0.31
Trim39-203ENSMUST00000113706 Acsbg2Q2XU92 667 aa17.02■□□□□ 0.31
Trim39-203ENSMUST00000113706 Ccdc114Q3UX62 658 aa17.02■□□□□ 0.31
Trim39-203ENSMUST00000113706 Sh3gl2Q62420 352 aa17.02■□□□□ 0.31
Trim39-203ENSMUST00000113706 Ublcp1Q8BGR9 318 aa17.02■□□□□ 0.31
Trim39-203ENSMUST00000113706 Snx29Q9D3S3 818 aa17.02■□□□□ 0.31
Trim39-203ENSMUST00000113706 Ank3G5E8K5 1961 aa17.01■□□□□ 0.31
Trim39-203ENSMUST00000113706 Prdm12A2AJ77 365 aa17.01■□□□□ 0.31
Trim39-203ENSMUST00000113706 Vmn2r77L7N2B7 854 aa17.01■□□□□ 0.31
Trim39-203ENSMUST00000113706 Tagap1P0CAX8 505 aa17.01■□□□□ 0.31
Trim39-203ENSMUST00000113706 Xrcc5P27641 732 aa17.01■□□□□ 0.31
Trim39-203ENSMUST00000113706 Nploc4P60670 608 aa17.01■□□□□ 0.31
Trim39-203ENSMUST00000113706 Dsg1aQ61495 1057 aa17.01■□□□□ 0.31
Trim39-203ENSMUST00000113706 Sorbs1Q62417 1290 aa17.01■□□□□ 0.31
Trim39-203ENSMUST00000113706 PnocQ64387 187 aa17.01■□□□□ 0.31
Trim39-203ENSMUST00000113706 Fgfr1opQ66JX5 399 aa17.01■□□□□ 0.31
Trim39-203ENSMUST00000113706 Slc51bQ80WK2 128 aa17.01■□□□□ 0.31
Trim39-203ENSMUST00000113706 Rnaseh2bQ80ZV0 308 aa17.01■□□□□ 0.31
Trim39-203ENSMUST00000113706 Ttc22Q8C159 568 aa17.01■□□□□ 0.31
Trim39-203ENSMUST00000113706 Bud13Q8R149 637 aa17.01■□□□□ 0.31
Trim39-203ENSMUST00000113706 Ppp1r16bQ8VHQ3 568 aa17.01■□□□□ 0.31
Trim39-203ENSMUST00000113706 2210011C24RikA0A087WQ89 206 aa17.01■□□□□ 0.31
Trim39-203ENSMUST00000113706 Il27raO70394 623 aa17.01■□□□□ 0.31
Trim39-203ENSMUST00000113706 Rfc1P35601 1131 aa17.01■□□□□ 0.31
Trim39-203ENSMUST00000113706 Scarf2P59222 833 aa17.01■□□□□ 0.31
Trim39-203ENSMUST00000113706 NfiaQ02780 532 aa17.01■□□□□ 0.31
Trim39-203ENSMUST00000113706 Trip13Q3UA06 432 aa17.01■□□□□ 0.31
Trim39-203ENSMUST00000113706 Arglu1Q3UL36 271 aaKnown RBP17.01■□□□□ 0.31
Trim39-203ENSMUST00000113706 Icam5Q60625 917 aa17.01■□□□□ 0.31
Trim39-203ENSMUST00000113706 Mbtd1Q6P5G3 631 aa17.01■□□□□ 0.31
Trim39-203ENSMUST00000113706 Zmynd15Q8C0R7 736 aa17.01■□□□□ 0.31
Trim39-203ENSMUST00000113706 Usp20Q8C6M1 916 aa17.01■□□□□ 0.31
Trim39-203ENSMUST00000113706 Epn2Q8CHU3 595 aa17.01■□□□□ 0.31
Trim39-203ENSMUST00000113706 Pcdhgb4Q91XX6 912 aa17.01■□□□□ 0.31
Trim39-203ENSMUST00000113706 Rtfdc1Q99K95 307 aa17.01■□□□□ 0.31
Trim39-203ENSMUST00000113706 Rnf225Q9D7D1 332 aa17.01■□□□□ 0.31
Trim39-203ENSMUST00000113706 Plekhg4A0A1L1SU27 1217 aa17■□□□□ 0.31
Trim39-203ENSMUST00000113706 OgdhlE9Q7L0 1029 aa17■□□□□ 0.31
Trim39-203ENSMUST00000113706 PtenO08586 403 aa17■□□□□ 0.31
Trim39-203ENSMUST00000113706 ChkbO55229 394 aa17■□□□□ 0.31
Trim39-203ENSMUST00000113706 Tfdp1Q08639 410 aa17■□□□□ 0.31
Trim39-203ENSMUST00000113706 Trim72Q1XH17 477 aa17■□□□□ 0.31
Trim39-203ENSMUST00000113706 Ush1gQ80T11 461 aa17■□□□□ 0.31
Trim39-203ENSMUST00000113706 Fam193aQ8CGI1 1231 aaKnown RBP17■□□□□ 0.31
Trim39-203ENSMUST00000113706 OgtQ8CGY8 1046 aa17■□□□□ 0.31
Trim39-203ENSMUST00000113706 Senp2Q91ZX6 588 aa17■□□□□ 0.31
Trim39-203ENSMUST00000113706 Rab11fip1Q9D620 645 aa17■□□□□ 0.31
Trim39-203ENSMUST00000113706 Pdk2Q9JK42 407 aa17■□□□□ 0.31
Trim39-203ENSMUST00000113706 Fmnl1Q9JL26 1094 aa17■□□□□ 0.31
Trim39-203ENSMUST00000113706 PolkQ9QUG2 852 aa17■□□□□ 0.31
Trim39-203ENSMUST00000113706 Slc35g2D3YVE8 412 aa17■□□□□ 0.31
Trim39-203ENSMUST00000113706 Gm10801F7C7Q0 168 aa17■□□□□ 0.31
Trim39-203ENSMUST00000113706 4933406M09RikG3XA12 479 aa17■□□□□ 0.31
Trim39-203ENSMUST00000113706 Nub1P54729 614 aa17■□□□□ 0.31
Trim39-203ENSMUST00000113706 Lrrc45Q8CIM1 670 aa17■□□□□ 0.31
Trim39-203ENSMUST00000113706 Scrn2Q8VCA8 425 aa17■□□□□ 0.31
Trim39-203ENSMUST00000113706 Llcfc1Q9D9P8 108 aa17■□□□□ 0.31
Trim39-203ENSMUST00000113706 Gm28036V9GXJ1 658 aa17■□□□□ 0.31
Trim39-203ENSMUST00000113706 Gm8994E9PV04 411 aaKnown RBP17■□□□□ 0.31
Trim39-203ENSMUST00000113706 Aoc3O70423 765 aa17■□□□□ 0.31
Trim39-203ENSMUST00000113706 LipeP54310 759 aa17■□□□□ 0.31
Trim39-203ENSMUST00000113706 Prmt6Q6NZB1 378 aa17■□□□□ 0.31
Trim39-203ENSMUST00000113706 Ppm1eQ80TL0 749 aa17■□□□□ 0.31
Trim39-203ENSMUST00000113706 Pja2Q80U04 707 aa17■□□□□ 0.31
Trim39-203ENSMUST00000113706 Naa15Q80UM3 865 aaKnown RBP17■□□□□ 0.31
Trim39-203ENSMUST00000113706 Slc38a7Q8BWH0 463 aa17■□□□□ 0.31
Trim39-203ENSMUST00000113706 BbxQ8VBW5 907 aa17■□□□□ 0.31
Trim39-203ENSMUST00000113706 Dph5Q9CWQ0 281 aa17■□□□□ 0.31
Trim39-203ENSMUST00000113706 Ssr1Q9CY50 286 aaKnown RBP17■□□□□ 0.31
Trim39-203ENSMUST00000113706 Cpsf3Q9QXK7 684 aa17■□□□□ 0.31
Trim39-203ENSMUST00000113706 Gm4846B2RWH8 538 aa16.99■□□□□ 0.31
Trim39-203ENSMUST00000113706 Muc1Q02496 630 aa16.99■□□□□ 0.31
Trim39-203ENSMUST00000113706 Grm2Q14BI2 872 aa16.99■□□□□ 0.31
Trim39-203ENSMUST00000113706 Nr2e1Q64104 385 aa16.99■□□□□ 0.31
Trim39-203ENSMUST00000113706 Nlgn2Q69ZK9 836 aa16.99■□□□□ 0.31
Trim39-203ENSMUST00000113706 Qsox1Q8BND5 748 aa16.99■□□□□ 0.31
Trim39-203ENSMUST00000113706 Celf3Q8CIN6 465 aa16.99■□□□□ 0.31
Trim39-203ENSMUST00000113706 Znf467Q8JZL0 594 aa16.99■□□□□ 0.31
Trim39-203ENSMUST00000113706 Lgi2Q8K4Z0 550 aa16.99■□□□□ 0.31
Trim39-203ENSMUST00000113706 Arid2E9Q7E2 1828 aa16.99■□□□□ 0.31
Trim39-203ENSMUST00000113706 Gm13084A2A8N0 494 aa16.99■□□□□ 0.31
Trim39-203ENSMUST00000113706 HunkO88866 714 aa16.99■□□□□ 0.31
Trim39-203ENSMUST00000113706 Cyp2b10P12791 500 aa16.99■□□□□ 0.31
Trim39-203ENSMUST00000113706 Tnnc1P19123 161 aa16.99■□□□□ 0.31
Trim39-203ENSMUST00000113706 Spout1Q3UHX9 385 aaKnown RBP16.99■□□□□ 0.31
Trim39-203ENSMUST00000113706 Rmdn3Q3UJU9 470 aa16.99■□□□□ 0.31
Trim39-203ENSMUST00000113706 Pak2Q8CIN4 524 aa16.99■□□□□ 0.31
Trim39-203ENSMUST00000113706 PhykplQ8R1K4 467 aa16.99■□□□□ 0.31
Trim39-203ENSMUST00000113706 Golga5Q9QYE6 729 aa16.99■□□□□ 0.31
Trim39-203ENSMUST00000113706 Pdzrn4E9PUZ9 1014 aa16.98■□□□□ 0.31
Trim39-203ENSMUST00000113706 Palb2Q3U0P1 1104 aa16.98■□□□□ 0.31
Trim39-203ENSMUST00000113706 Ahcyl2Q68FL4 613 aaKnown RBP16.98■□□□□ 0.31
Trim39-203ENSMUST00000113706 Calr3Q9D9Q6 380 aa16.98■□□□□ 0.31
Trim39-203ENSMUST00000113706 Znf704Q9ERQ3 566 aa16.98■□□□□ 0.31
Retrieved 100 of 22,080 RNA–protein pairs in 15.5 ms