Protein–RNA interactions for Protein: Q8K4Z0

Lgi2, Leucine-rich repeat LGI family member 2, mousemouse

Predictions only

Length 550 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Lgi2Q8K4Z0 Necab2-201ENSMUST00000098363 1976 ntAPPRIS P1 TSL 1 (best) BASIC36.15■■■■□ 3.38
Lgi2Q8K4Z0 Gm25239-201ENSMUST00000174915 86 ntBASIC35.78■■■■□ 3.32
Lgi2Q8K4Z0 Cacng8-202ENSMUST00000182222 1897 ntAPPRIS P1 TSL 5 BASIC34.79■■■■□ 3.16
Lgi2Q8K4Z0 Khdrbs3-201ENSMUST00000022954 1887 ntAPPRIS P1 TSL 1 (best) BASIC34.78■■■■□ 3.16
Lgi2Q8K4Z0 Psd-208ENSMUST00000224556 2034 ntBASIC33.89■■■■□ 3.02
Lgi2Q8K4Z0 Pkdcc-204ENSMUST00000170794 2446 ntAPPRIS P1 TSL 1 (best) BASIC33.58■■■□□ 2.97
Lgi2Q8K4Z0 Zic2-201ENSMUST00000075888 2440 ntAPPRIS P1 TSL 1 (best) BASIC33.18■■■□□ 2.9
Lgi2Q8K4Z0 Plekho1-201ENSMUST00000015889 1931 ntAPPRIS P1 TSL 1 (best) BASIC33.08■■■□□ 2.89
Lgi2Q8K4Z0 Smc2os-201ENSMUST00000141473 626 ntTSL 1 (best) BASIC32.81■■■□□ 2.84
Lgi2Q8K4Z0 Hnrnpd-201ENSMUST00000019128 2000 ntAPPRIS ALT2 TSL 1 (best) BASIC32.8■■■□□ 2.84
Lgi2Q8K4Z0 1810037I17Rik-201ENSMUST00000106429 1160 ntAPPRIS P1 TSL 1 (best) BASIC32.48■■■□□ 2.79
Lgi2Q8K4Z0 Six2-202ENSMUST00000163568 2119 ntAPPRIS P1 TSL 1 (best) BASIC32.38■■■□□ 2.77
Lgi2Q8K4Z0 Trnp1-202ENSMUST00000125541 1654 ntAPPRIS P1 TSL 1 (best) BASIC32.28■■■□□ 2.76
Lgi2Q8K4Z0 Mbd2-201ENSMUST00000074058 1953 ntAPPRIS P1 TSL 1 (best) BASIC32.27■■■□□ 2.76
Lgi2Q8K4Z0 Tmem165-201ENSMUST00000031144 1897 ntAPPRIS P1 TSL 1 (best) BASIC32.24■■■□□ 2.75
Lgi2Q8K4Z0 Gm15042-201ENSMUST00000120212 883 ntBASIC32.02■■■□□ 2.72
Lgi2Q8K4Z0 B330016D10Rik-201ENSMUST00000049927 1701 ntBASIC32■■■□□ 2.71
Lgi2Q8K4Z0 Rab12-201ENSMUST00000070538 2057 ntAPPRIS ALT2 TSL 1 (best) BASIC31.84■■■□□ 2.69
Lgi2Q8K4Z0 Wtip-201ENSMUST00000038537 1962 ntAPPRIS P1 TSL 1 (best) BASIC31.83■■■□□ 2.69
Lgi2Q8K4Z0 Pabpn1-207ENSMUST00000150975 1775 ntAPPRIS ALT2 TSL 1 (best) BASIC31.63■■■□□ 2.65
Lgi2Q8K4Z0 Tmem259-201ENSMUST00000052885 2225 ntAPPRIS P1 TSL 1 (best) BASIC31.62■■■□□ 2.65
Lgi2Q8K4Z0 Gm15045-201ENSMUST00000117359 883 ntBASIC31.55■■■□□ 2.64
Lgi2Q8K4Z0 Foxd3-201ENSMUST00000087285 2324 ntAPPRIS P1 BASIC31.44■■■□□ 2.62
Lgi2Q8K4Z0 Pabpn1-202ENSMUST00000116476 1761 ntAPPRIS ALT2 TSL 1 (best) BASIC31.39■■■□□ 2.62
Lgi2Q8K4Z0 Hoxd8-202ENSMUST00000074721 1758 ntAPPRIS ALT2 TSL 1 (best) BASIC31.2■■■□□ 2.58
Lgi2Q8K4Z0 Poldip2-201ENSMUST00000001127 2054 ntAPPRIS P1 TSL 1 (best) BASIC31.18■■■□□ 2.58
Lgi2Q8K4Z0 Six2-201ENSMUST00000024947 1812 ntAPPRIS P1 TSL 1 (best) BASIC31.14■■■□□ 2.58
Lgi2Q8K4Z0 Gm12100-201ENSMUST00000150255 1933 ntTSL 1 (best) BASIC31.12■■■□□ 2.57
Lgi2Q8K4Z0 Rhno1-201ENSMUST00000057421 1584 ntAPPRIS P1 TSL 1 (best) BASIC31■■■□□ 2.55
Lgi2Q8K4Z0 Ybx2-201ENSMUST00000018698 1673 ntAPPRIS P3 TSL 1 (best) BASIC30.99■■■□□ 2.55
Lgi2Q8K4Z0 4930537H20Rik-201ENSMUST00000200437 1683 ntBASIC30.97■■■□□ 2.55
Lgi2Q8K4Z0 Ankrd40-202ENSMUST00000051221 1477 ntAPPRIS ALT2 TSL 1 (best) BASIC30.9■■■□□ 2.54
Lgi2Q8K4Z0 Sh3glb2-204ENSMUST00000113621 1851 ntTSL 5 BASIC30.88■■■□□ 2.53
Lgi2Q8K4Z0 Cyhr1-203ENSMUST00000176274 1854 ntAPPRIS ALT2 TSL 1 (best) BASIC30.85■■■□□ 2.53
Lgi2Q8K4Z0 Ppp2r5c-206ENSMUST00000222276 1802 ntTSL 2 BASIC30.82■■■□□ 2.52
Lgi2Q8K4Z0 Ube2ql1-201ENSMUST00000065118 2674 ntAPPRIS P1 TSL 1 (best) BASIC30.77■■■□□ 2.52
Lgi2Q8K4Z0 Gm24109-201ENSMUST00000175489 103 ntBASIC30.76■■■□□ 2.51
Lgi2Q8K4Z0 Kcnmb4-201ENSMUST00000068233 1367 ntAPPRIS P1 TSL 1 (best) BASIC30.66■■■□□ 2.5
Lgi2Q8K4Z0 Gm26699-201ENSMUST00000180825 2291 ntTSL 5 BASIC30.57■■■□□ 2.48
Lgi2Q8K4Z0 Msantd2-201ENSMUST00000048604 2291 ntAPPRIS P1 TSL 1 (best) BASIC30.52■■■□□ 2.48
Lgi2Q8K4Z0 Ctdnep1-201ENSMUST00000108593 1627 ntAPPRIS P1 TSL 1 (best) BASIC30.48■■■□□ 2.47
Lgi2Q8K4Z0 Cdk9-201ENSMUST00000009699 1733 ntAPPRIS P1 TSL 1 (best) BASIC30.48■■■□□ 2.47
Lgi2Q8K4Z0 Gm10524-201ENSMUST00000181931 1893 ntBASIC30.48■■■□□ 2.47
Lgi2Q8K4Z0 Nfix-202ENSMUST00000099070 1728 ntAPPRIS P1 TSL 1 (best) BASIC30.42■■■□□ 2.46
Lgi2Q8K4Z0 Gm42596-201ENSMUST00000196305 1958 ntBASIC30.23■■■□□ 2.43
Lgi2Q8K4Z0 Nfic-204ENSMUST00000117966 1655 ntTSL 1 (best) BASIC30.21■■■□□ 2.43
Lgi2Q8K4Z0 Rrnad1-207ENSMUST00000160143 1568 ntTSL 5 BASIC30.21■■■□□ 2.43
Lgi2Q8K4Z0 Tcfl5-201ENSMUST00000037877 2225 ntAPPRIS P1 TSL 1 (best) BASIC30.21■■■□□ 2.43
Lgi2Q8K4Z0 Mapkapk5-201ENSMUST00000031410 2234 ntAPPRIS P2 TSL 1 (best) BASIC30.2■■■□□ 2.43
Lgi2Q8K4Z0 Gatad1-202ENSMUST00000119783 1278 ntAPPRIS ALT2 TSL 1 (best) BASIC30.18■■■□□ 2.42
Lgi2Q8K4Z0 Sept3-202ENSMUST00000116423 2467 ntAPPRIS P1 TSL 1 (best) BASIC30.13■■■□□ 2.41
Lgi2Q8K4Z0 Sh3glb2-201ENSMUST00000028214 1810 ntAPPRIS P1 TSL 1 (best) BASIC30.02■■■□□ 2.4
Lgi2Q8K4Z0 Gm23366-201ENSMUST00000175022 89 ntBASIC29.99■■■□□ 2.39
Lgi2Q8K4Z0 Ldb1-208ENSMUST00000185355 2088 ntTSL 1 (best) BASIC29.9■■■□□ 2.38
Lgi2Q8K4Z0 Kdm2a-208ENSMUST00000176483 1128 ntTSL 1 (best) BASIC29.89■■■□□ 2.38
Lgi2Q8K4Z0 Epcam-201ENSMUST00000053577 2040 ntAPPRIS P1 TSL 5 BASIC29.89■■■□□ 2.38
Lgi2Q8K4Z0 Gm26588-201ENSMUST00000181064 2098 ntTSL 1 (best) BASIC29.88■■■□□ 2.37
Lgi2Q8K4Z0 Arhgdig-201ENSMUST00000025019 1032 ntAPPRIS P1 TSL 1 (best) BASIC29.79■■■□□ 2.36
Lgi2Q8K4Z0 Six3-202ENSMUST00000175898 2419 ntAPPRIS P2 TSL 1 (best) BASIC29.78■■■□□ 2.36
Lgi2Q8K4Z0 Nkx3-2-201ENSMUST00000060820 1718 ntAPPRIS P1 TSL 1 (best) BASIC29.78■■■□□ 2.36
Lgi2Q8K4Z0 Cd63-201ENSMUST00000026407 1063 ntAPPRIS P1 TSL 1 (best) BASIC29.77■■■□□ 2.36
Lgi2Q8K4Z0 Rab12-205ENSMUST00000167962 2010 ntAPPRIS P2 TSL 1 (best) BASIC29.73■■■□□ 2.35
Lgi2Q8K4Z0 Ccm2l-201ENSMUST00000109800 2158 ntAPPRIS P1 TSL 5 BASIC29.71■■■□□ 2.35
Lgi2Q8K4Z0 Glt8d1-201ENSMUST00000022476 2018 ntAPPRIS P1 TSL 1 (best) BASIC29.7■■■□□ 2.34
Lgi2Q8K4Z0 Hoxa4-201ENSMUST00000101395 1594 ntAPPRIS P1 TSL 1 (best) BASIC29.64■■■□□ 2.33
Lgi2Q8K4Z0 CT025624.2-201ENSMUST00000223609 1909 ntBASIC29.61■■■□□ 2.33
Lgi2Q8K4Z0 Stk24-201ENSMUST00000079817 2676 ntAPPRIS P1 TSL 1 (best) BASIC29.54■■■□□ 2.32
Lgi2Q8K4Z0 Brsk2-203ENSMUST00000078200 2363 ntAPPRIS P4 TSL 1 (best) BASIC29.49■■■□□ 2.31
Lgi2Q8K4Z0 AC153911.1-202ENSMUST00000218534 1034 ntBASIC29.47■■■□□ 2.31
Lgi2Q8K4Z0 Atp1b3-201ENSMUST00000034983 1994 ntAPPRIS P1 TSL 1 (best) BASIC29.44■■■□□ 2.3
Lgi2Q8K4Z0 Rnf126-201ENSMUST00000047203 1639 ntAPPRIS P1 TSL 1 (best) BASIC29.38■■■□□ 2.29
Lgi2Q8K4Z0 Fbxo6-203ENSMUST00000105706 1938 ntAPPRIS P1 TSL 1 (best) BASIC29.35■■■□□ 2.29
Lgi2Q8K4Z0 Fam241a-202ENSMUST00000199273 2234 ntAPPRIS P1 TSL 1 (best) BASIC29.35■■■□□ 2.29
Lgi2Q8K4Z0 Tusc1-201ENSMUST00000066774 1374 ntAPPRIS P1 BASIC29.32■■■□□ 2.28
Lgi2Q8K4Z0 Mta3-202ENSMUST00000112349 1728 ntAPPRIS ALT2 TSL 1 (best) BASIC29.31■■■□□ 2.28
Lgi2Q8K4Z0 Trabd-203ENSMUST00000165690 1941 ntAPPRIS P2 TSL 1 (best) BASIC29.22■■■□□ 2.27
Lgi2Q8K4Z0 Wsb2-201ENSMUST00000031309 2421 ntAPPRIS P2 TSL 1 (best) BASIC29.18■■■□□ 2.26
Lgi2Q8K4Z0 Vsig8-201ENSMUST00000061835 1801 ntAPPRIS P1 TSL 1 (best) BASIC29.17■■■□□ 2.26
Lgi2Q8K4Z0 Ldb1-207ENSMUST00000156585 2014 ntTSL 1 (best) BASIC29.1■■■□□ 2.25
Lgi2Q8K4Z0 Atoh7-201ENSMUST00000044059 1629 ntAPPRIS P1 BASIC29.07■■■□□ 2.24
Lgi2Q8K4Z0 Samd1-201ENSMUST00000095228 2071 ntAPPRIS P1 TSL 5 BASIC29.04■■■□□ 2.24
Lgi2Q8K4Z0 Rnf215-201ENSMUST00000003677 1874 ntAPPRIS P1 TSL 1 (best) BASIC29.02■■■□□ 2.24
Lgi2Q8K4Z0 Rundc3a-201ENSMUST00000006750 2046 ntAPPRIS P2 TSL 1 (best) BASIC28.99■■■□□ 2.23
Lgi2Q8K4Z0 Gdf7-201ENSMUST00000037313 1423 ntAPPRIS P2 TSL 5 BASIC28.98■■■□□ 2.23
Lgi2Q8K4Z0 Hnrnpa0-201ENSMUST00000007980 2678 ntAPPRIS P1 BASIC28.9■■■□□ 2.22
Lgi2Q8K4Z0 Fndc10-201ENSMUST00000099265 2140 ntAPPRIS P1 BASIC28.9■■■□□ 2.22
Lgi2Q8K4Z0 Cadm4-201ENSMUST00000068023 2161 ntAPPRIS P1 TSL 1 (best) BASIC28.9■■■□□ 2.22
Lgi2Q8K4Z0 Dlx4-201ENSMUST00000021241 2282 ntAPPRIS P1 TSL 1 (best) BASIC28.86■■■□□ 2.21
Lgi2Q8K4Z0 G6pc3-202ENSMUST00000078975 1573 ntAPPRIS P1 TSL 1 (best) BASIC28.75■■■□□ 2.19
Lgi2Q8K4Z0 Snx24-202ENSMUST00000165032 1880 ntAPPRIS P1 TSL 1 (best) BASIC28.74■■■□□ 2.19
Lgi2Q8K4Z0 Tmeff1-201ENSMUST00000030032 2461 ntAPPRIS P1 TSL 1 (best) BASIC28.66■■■□□ 2.18
Lgi2Q8K4Z0 Rpia-201ENSMUST00000066134 1829 ntAPPRIS P1 TSL 1 (best) BASIC28.66■■■□□ 2.18
Lgi2Q8K4Z0 Jdp2-203ENSMUST00000177587 1645 ntAPPRIS P1 TSL 1 (best) BASIC28.65■■■□□ 2.18
Lgi2Q8K4Z0 Gm26859-201ENSMUST00000181743 1852 ntTSL 5 BASIC28.65■■■□□ 2.18
Lgi2Q8K4Z0 Ctbp1-206ENSMUST00000201575 2091 ntTSL 1 (best) BASIC28.64■■■□□ 2.18
Lgi2Q8K4Z0 St3gal5-201ENSMUST00000069994 2258 ntAPPRIS P3 TSL 1 (best) BASIC28.62■■■□□ 2.17
Lgi2Q8K4Z0 Orai1-202ENSMUST00000121652 1875 ntAPPRIS P1 TSL 1 (best) BASIC28.61■■■□□ 2.17
Lgi2Q8K4Z0 Hoxd8-201ENSMUST00000019749 2634 ntAPPRIS P3 TSL 1 (best) BASIC28.58■■■□□ 2.17
Lgi2Q8K4Z0 Abhd17a-204ENSMUST00000191440 1529 ntTSL 1 (best) BASIC28.58■■■□□ 2.17
Lgi2Q8K4Z0 Chmp4b-201ENSMUST00000044277 1616 ntAPPRIS P1 TSL 1 (best) BASIC28.58■■■□□ 2.17
Retrieved 100 of 76,532 protein–RNA pairs in 80.1 ms