Protein–RNA interactions for Protein: Q1XH17

Trim72, Tripartite motif-containing protein 72, mousemouse

Predictions only

Length 477 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trim72Q1XH17 Gm25239-201ENSMUST00000174915 86 ntBASIC39.4■■■■□ 3.9
Trim72Q1XH17 Necab2-201ENSMUST00000098363 1976 ntAPPRIS P1 TSL 1 (best) BASIC36.62■■■■□ 3.45
Trim72Q1XH17 Smc2os-201ENSMUST00000141473 626 ntTSL 1 (best) BASIC36.16■■■■□ 3.38
Trim72Q1XH17 1810037I17Rik-201ENSMUST00000106429 1160 ntAPPRIS P1 TSL 1 (best) BASIC35.77■■■■□ 3.32
Trim72Q1XH17 Khdrbs3-201ENSMUST00000022954 1887 ntAPPRIS P1 TSL 1 (best) BASIC35.7■■■■□ 3.31
Trim72Q1XH17 Cacng8-202ENSMUST00000182222 1897 ntAPPRIS P1 TSL 5 BASIC35.43■■■■□ 3.26
Trim72Q1XH17 Gm15042-201ENSMUST00000120212 883 ntBASIC35■■■■□ 3.19
Trim72Q1XH17 Gm15045-201ENSMUST00000117359 883 ntBASIC34.3■■■■□ 3.08
Trim72Q1XH17 Plekho1-201ENSMUST00000015889 1931 ntAPPRIS P1 TSL 1 (best) BASIC34.17■■■■□ 3.06
Trim72Q1XH17 Psd-208ENSMUST00000224556 2034 ntBASIC33.98■■■■□ 3.03
Trim72Q1XH17 Gm24109-201ENSMUST00000175489 103 ntBASIC33.89■■■■□ 3.02
Trim72Q1XH17 Kcnmb4-201ENSMUST00000068233 1367 ntAPPRIS P1 TSL 1 (best) BASIC33.74■■■□□ 2.99
Trim72Q1XH17 B330016D10Rik-201ENSMUST00000049927 1701 ntBASIC33.55■■■□□ 2.96
Trim72Q1XH17 Hnrnpd-201ENSMUST00000019128 2000 ntAPPRIS ALT2 TSL 1 (best) BASIC33.52■■■□□ 2.96
Trim72Q1XH17 Trnp1-202ENSMUST00000125541 1654 ntAPPRIS P1 TSL 1 (best) BASIC33.5■■■□□ 2.95
Trim72Q1XH17 Gatad1-202ENSMUST00000119783 1278 ntAPPRIS ALT2 TSL 1 (best) BASIC33.24■■■□□ 2.91
Trim72Q1XH17 Gm23366-201ENSMUST00000175022 89 ntBASIC33.03■■■□□ 2.88
Trim72Q1XH17 Ankrd40-202ENSMUST00000051221 1477 ntAPPRIS ALT2 TSL 1 (best) BASIC32.96■■■□□ 2.87
Trim72Q1XH17 Kdm2a-208ENSMUST00000176483 1128 ntTSL 1 (best) BASIC32.94■■■□□ 2.86
Trim72Q1XH17 Tmem165-201ENSMUST00000031144 1897 ntAPPRIS P1 TSL 1 (best) BASIC32.91■■■□□ 2.86
Trim72Q1XH17 Rhno1-201ENSMUST00000057421 1584 ntAPPRIS P1 TSL 1 (best) BASIC32.9■■■□□ 2.86
Trim72Q1XH17 Pabpn1-207ENSMUST00000150975 1775 ntAPPRIS ALT2 TSL 1 (best) BASIC32.87■■■□□ 2.85
Trim72Q1XH17 Arhgdig-201ENSMUST00000025019 1032 ntAPPRIS P1 TSL 1 (best) BASIC32.81■■■□□ 2.84
Trim72Q1XH17 Hoxd8-202ENSMUST00000074721 1758 ntAPPRIS ALT2 TSL 1 (best) BASIC32.81■■■□□ 2.84
Trim72Q1XH17 Mbd2-201ENSMUST00000074058 1953 ntAPPRIS P1 TSL 1 (best) BASIC32.77■■■□□ 2.84
Trim72Q1XH17 Ybx2-201ENSMUST00000018698 1673 ntAPPRIS P3 TSL 1 (best) BASIC32.73■■■□□ 2.83
Trim72Q1XH17 4930537H20Rik-201ENSMUST00000200437 1683 ntBASIC32.71■■■□□ 2.83
Trim72Q1XH17 Cd63-201ENSMUST00000026407 1063 ntAPPRIS P1 TSL 1 (best) BASIC32.6■■■□□ 2.81
Trim72Q1XH17 Ctdnep1-201ENSMUST00000108593 1627 ntAPPRIS P1 TSL 1 (best) BASIC32.59■■■□□ 2.81
Trim72Q1XH17 Six2-202ENSMUST00000163568 2119 ntAPPRIS P1 TSL 1 (best) BASIC32.58■■■□□ 2.81
Trim72Q1XH17 Ppp2r5c-206ENSMUST00000222276 1802 ntTSL 2 BASIC32.34■■■□□ 2.77
Trim72Q1XH17 Pkdcc-204ENSMUST00000170794 2446 ntAPPRIS P1 TSL 1 (best) BASIC32.25■■■□□ 2.75
Trim72Q1XH17 Tusc1-201ENSMUST00000066774 1374 ntAPPRIS P1 BASIC32.22■■■□□ 2.75
Trim72Q1XH17 Pabpn1-202ENSMUST00000116476 1761 ntAPPRIS ALT2 TSL 1 (best) BASIC32.2■■■□□ 2.75
Trim72Q1XH17 AC153911.1-202ENSMUST00000218534 1034 ntBASIC32.1■■■□□ 2.73
Trim72Q1XH17 Wtip-201ENSMUST00000038537 1962 ntAPPRIS P1 TSL 1 (best) BASIC32.06■■■□□ 2.72
Trim72Q1XH17 Zic2-201ENSMUST00000075888 2440 ntAPPRIS P1 TSL 1 (best) BASIC31.95■■■□□ 2.71
Trim72Q1XH17 Six2-201ENSMUST00000024947 1812 ntAPPRIS P1 TSL 1 (best) BASIC31.94■■■□□ 2.7
Trim72Q1XH17 Rrnad1-207ENSMUST00000160143 1568 ntTSL 5 BASIC31.81■■■□□ 2.68
Trim72Q1XH17 Cyhr1-203ENSMUST00000176274 1854 ntAPPRIS ALT2 TSL 1 (best) BASIC31.78■■■□□ 2.68
Trim72Q1XH17 Poldip2-201ENSMUST00000001127 2054 ntAPPRIS P1 TSL 1 (best) BASIC31.67■■■□□ 2.66
Trim72Q1XH17 Rab12-201ENSMUST00000070538 2057 ntAPPRIS ALT2 TSL 1 (best) BASIC31.47■■■□□ 2.63
Trim72Q1XH17 Nfix-202ENSMUST00000099070 1728 ntAPPRIS P1 TSL 1 (best) BASIC31.39■■■□□ 2.62
Trim72Q1XH17 Gm10524-201ENSMUST00000181931 1893 ntBASIC31.39■■■□□ 2.62
Trim72Q1XH17 Sh3glb2-204ENSMUST00000113621 1851 ntTSL 5 BASIC31.36■■■□□ 2.61
Trim72Q1XH17 Nfic-204ENSMUST00000117966 1655 ntTSL 1 (best) BASIC31.35■■■□□ 2.61
Trim72Q1XH17 Gm20732-201ENSMUST00000175699 686 ntTSL 3 BASIC31.28■■■□□ 2.6
Trim72Q1XH17 Cdk9-201ENSMUST00000009699 1733 ntAPPRIS P1 TSL 1 (best) BASIC31.24■■■□□ 2.59
Trim72Q1XH17 Tmem259-201ENSMUST00000052885 2225 ntAPPRIS P1 TSL 1 (best) BASIC31.22■■■□□ 2.59
Trim72Q1XH17 Rexo2-201ENSMUST00000034524 1077 ntAPPRIS P1 TSL 1 (best) BASIC31.16■■■□□ 2.58
Trim72Q1XH17 Rnf126-201ENSMUST00000047203 1639 ntAPPRIS P1 TSL 1 (best) BASIC31.08■■■□□ 2.57
Trim72Q1XH17 Sh3glb2-201ENSMUST00000028214 1810 ntAPPRIS P1 TSL 1 (best) BASIC31.05■■■□□ 2.56
Trim72Q1XH17 Hoxa4-201ENSMUST00000101395 1594 ntAPPRIS P1 TSL 1 (best) BASIC31.05■■■□□ 2.56
Trim72Q1XH17 Pkig-201ENSMUST00000064703 1036 ntAPPRIS P1 TSL 1 (best) BASIC31.02■■■□□ 2.56
Trim72Q1XH17 Fgf2-204ENSMUST00000138563 1240 ntAPPRIS P2 TSL 5 BASIC30.98■■■□□ 2.55
Trim72Q1XH17 Drap1-201ENSMUST00000025853 992 ntAPPRIS P1 TSL 1 (best) BASIC30.96■■■□□ 2.55
Trim72Q1XH17 Gm12100-201ENSMUST00000150255 1933 ntTSL 1 (best) BASIC30.94■■■□□ 2.54
Trim72Q1XH17 Gm25238-201ENSMUST00000174914 89 ntBASIC30.9■■■□□ 2.54
Trim72Q1XH17 Drap1-203ENSMUST00000113674 939 ntTSL 2 BASIC30.89■■■□□ 2.54
Trim72Q1XH17 Mta3-202ENSMUST00000112349 1728 ntAPPRIS ALT2 TSL 1 (best) BASIC30.85■■■□□ 2.53
Trim72Q1XH17 Foxd3-201ENSMUST00000087285 2324 ntAPPRIS P1 BASIC30.81■■■□□ 2.52
Trim72Q1XH17 Gm27325-201ENSMUST00000175467 74 ntBASIC30.78■■■□□ 2.52
Trim72Q1XH17 CT025624.2-201ENSMUST00000223609 1909 ntBASIC30.76■■■□□ 2.51
Trim72Q1XH17 Nkx3-2-201ENSMUST00000060820 1718 ntAPPRIS P1 TSL 1 (best) BASIC30.76■■■□□ 2.51
Trim72Q1XH17 Gdf7-201ENSMUST00000037313 1423 ntAPPRIS P2 TSL 5 BASIC30.75■■■□□ 2.51
Trim72Q1XH17 Atoh7-201ENSMUST00000044059 1629 ntAPPRIS P1 BASIC30.73■■■□□ 2.51
Trim72Q1XH17 Fgf18-201ENSMUST00000020507 1086 ntAPPRIS P1 TSL 1 (best) BASIC30.73■■■□□ 2.51
Trim72Q1XH17 Trabd-203ENSMUST00000165690 1941 ntAPPRIS P2 TSL 1 (best) BASIC30.7■■■□□ 2.51
Trim72Q1XH17 Sh3glb2-214ENSMUST00000163668 1733 ntTSL 5 BASIC30.7■■■□□ 2.5
Trim72Q1XH17 Rab12-205ENSMUST00000167962 2010 ntAPPRIS P2 TSL 1 (best) BASIC30.61■■■□□ 2.49
Trim72Q1XH17 Gm42596-201ENSMUST00000196305 1958 ntBASIC30.6■■■□□ 2.49
Trim72Q1XH17 Rnf149-204ENSMUST00000195705 389 ntTSL 3 BASIC30.58■■■□□ 2.49
Trim72Q1XH17 Nrgn-201ENSMUST00000065668 1453 ntAPPRIS P1 TSL 1 (best) BASIC30.5■■■□□ 2.47
Trim72Q1XH17 Syce2-204ENSMUST00000170296 929 ntAPPRIS ALT2 TSL 2 BASIC30.43■■■□□ 2.46
Trim72Q1XH17 Cacng8-201ENSMUST00000092351 1380 ntAPPRIS P1 TSL 1 (best) BASIC30.38■■■□□ 2.45
Trim72Q1XH17 Glt8d1-201ENSMUST00000022476 2018 ntAPPRIS P1 TSL 1 (best) BASIC30.29■■■□□ 2.44
Trim72Q1XH17 Gm26699-201ENSMUST00000180825 2291 ntTSL 5 BASIC30.18■■■□□ 2.42
Trim72Q1XH17 Tprgl-202ENSMUST00000105639 642 ntTSL 5 BASIC30.15■■■□□ 2.42
Trim72Q1XH17 Crk-204ENSMUST00000108426 671 ntTSL 3 BASIC30.15■■■□□ 2.42
Trim72Q1XH17 Asmt-201ENSMUST00000178693 1191 ntAPPRIS P1 TSL 1 (best) BASIC30.15■■■□□ 2.42
Trim72Q1XH17 G6pc3-202ENSMUST00000078975 1573 ntAPPRIS P1 TSL 1 (best) BASIC30.15■■■□□ 2.42
Trim72Q1XH17 Stard10-201ENSMUST00000032927 1400 ntAPPRIS P1 TSL 1 (best) BASIC30.13■■■□□ 2.41
Trim72Q1XH17 Fbxo6-203ENSMUST00000105706 1938 ntAPPRIS P1 TSL 1 (best) BASIC30.12■■■□□ 2.41
Trim72Q1XH17 Tmed7-201ENSMUST00000036030 1436 ntTSL 5 BASIC30.1■■■□□ 2.41
Trim72Q1XH17 Vps37d-201ENSMUST00000067935 1544 ntAPPRIS P1 TSL 1 (best) BASIC30.1■■■□□ 2.41
Trim72Q1XH17 Vsig8-201ENSMUST00000061835 1801 ntAPPRIS P1 TSL 1 (best) BASIC30.08■■■□□ 2.41
Trim72Q1XH17 Crk-202ENSMUST00000093115 965 ntTSL 1 (best) BASIC30.01■■■□□ 2.39
Trim72Q1XH17 Epcam-201ENSMUST00000053577 2040 ntAPPRIS P1 TSL 5 BASIC29.96■■■□□ 2.39
Trim72Q1XH17 Abhd17a-204ENSMUST00000191440 1529 ntTSL 1 (best) BASIC29.96■■■□□ 2.39
Trim72Q1XH17 Ccm2l-201ENSMUST00000109800 2158 ntAPPRIS P1 TSL 5 BASIC29.96■■■□□ 2.39
Trim72Q1XH17 Sept3-202ENSMUST00000116423 2467 ntAPPRIS P1 TSL 1 (best) BASIC29.93■■■□□ 2.38
Trim72Q1XH17 Atp1b3-201ENSMUST00000034983 1994 ntAPPRIS P1 TSL 1 (best) BASIC29.91■■■□□ 2.38
Trim72Q1XH17 Ube2ql1-201ENSMUST00000065118 2674 ntAPPRIS P1 TSL 1 (best) BASIC29.91■■■□□ 2.38
Trim72Q1XH17 Jdp2-203ENSMUST00000177587 1645 ntAPPRIS P1 TSL 1 (best) BASIC29.9■■■□□ 2.38
Trim72Q1XH17 Ldb1-208ENSMUST00000185355 2088 ntTSL 1 (best) BASIC29.89■■■□□ 2.37
Trim72Q1XH17 Chmp4b-201ENSMUST00000044277 1616 ntAPPRIS P1 TSL 1 (best) BASIC29.89■■■□□ 2.37
Trim72Q1XH17 Rab21-202ENSMUST00000218831 843 ntBASIC29.87■■■□□ 2.37
Trim72Q1XH17 Tmem240-201ENSMUST00000127188 1308 ntAPPRIS P1 TSL 2 BASIC29.84■■■□□ 2.37
Trim72Q1XH17 Agap3-206ENSMUST00000212381 1191 ntTSL 5 BASIC29.76■■■□□ 2.35
Trim72Q1XH17 Nt5dc2-204ENSMUST00000227096 1848 ntAPPRIS P5 BASIC29.75■■■□□ 2.35
Retrieved 100 of 76,532 protein–RNA pairs in 107.4 ms