RNA–Protein interactions for RNA: YOL090W

MSH2, Transcript of Protein that binds to DNA mismatches, yeastyeast

Gene MSH2, Length 2,895 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
MSH2YOL090W CUE1P38428 203 aa2.73□□□□□ -1.97
MSH2YOL090W GRE3P38715 327 aaKnown RBP RIP-Chip data2.73□□□□□ -1.97not detected
MSH2YOL090W GOS1P38736 223 aa2.73□□□□□ -1.97
MSH2YOL090W YIL169CP40442 995 aa2.73□□□□□ -1.97
MSH2YOL090W GUF1P46943 645 aa2.73□□□□□ -1.97
MSH2YOL090W YPS5P53057 165 aa2.73□□□□□ -1.97
MSH2YOL090W NQM1P53228 333 aaPredicted RBP2.73□□□□□ -1.97
MSH2YOL090W NRK1P53915 240 aa2.73□□□□□ -1.97
MSH2YOL090W TRM82Q03774 444 aa2.73□□□□□ -1.97
MSH2YOL090W ICT1Q12385 394 aa2.73□□□□□ -1.97
MSH2YOL090W YPR064WQ12492 139 aa2.73□□□□□ -1.97
MSH2YOL090W ARP6Q12509 438 aa2.73□□□□□ -1.97
MSH2YOL090W PET494P07390 489 aaPredicted RBP2.72□□□□□ -1.97
MSH2YOL090W YOL163WP0CF20 169 aa2.72□□□□□ -1.97
MSH2YOL090W DSF1P0CX08 502 aa2.72□□□□□ -1.97
MSH2YOL090W YNR073CP0CX09 502 aa2.72□□□□□ -1.97
MSH2YOL090W GLC7P32598 312 aaKnown RBP2.72□□□□□ -1.97
MSH2YOL090W HMT1P38074 348 aa2.72□□□□□ -1.97
MSH2YOL090W IRC18P47056 224 aa2.72□□□□□ -1.97
MSH2YOL090W PRP24P49960 444 aaKnown RBP2.72□□□□□ -1.97
MSH2YOL090W MMS2P53152 137 aa2.72□□□□□ -1.97
MSH2YOL090W SWC4P53201 476 aa2.72□□□□□ -1.97
MSH2YOL090W SCS7Q03529 384 aa2.72□□□□□ -1.97
MSH2YOL090W YMR027WQ04371 470 aa2.72□□□□□ -1.97
MSH2YOL090W RIF2Q06208 395 aa2.72□□□□□ -1.97
MSH2YOL090W BSP1Q06604 576 aa2.72□□□□□ -1.97
MSH2YOL090W YDL199CQ12407 687 aa2.72□□□□□ -1.97
MSH2YOL090W NOT5Q12514 560 aaPredicted RBP2.72□□□□□ -1.97
MSH2YOL090W SPT3P06844 337 aa2.72□□□□□ -1.97
MSH2YOL090W GRX2P17695 143 aaKnown RBP2.72□□□□□ -1.97
MSH2YOL090W DER1P38307 211 aa2.72□□□□□ -1.97
MSH2YOL090W VRG4P40107 337 aa2.72□□□□□ -1.97
MSH2YOL090W PRE6P40303 254 aaKnown RBP2.72□□□□□ -1.97
MSH2YOL090W RTS2P40962 232 aa2.72□□□□□ -1.97
MSH2YOL090W SUR7P54003 302 aa2.72□□□□□ -1.97
MSH2YOL090W PEX30Q06169 523 aa2.72□□□□□ -1.97
MSH2YOL090W YLR126CQ12288 251 aa2.72□□□□□ -1.97
MSH2YOL090W YCR024C-BQ3E7Z8 88 aa2.72□□□□□ -1.97
MSH2YOL090W BCY1P07278 416 aaKnown RBP2.71□□□□□ -1.97
MSH2YOL090W PPH21P23594 369 aa2.71□□□□□ -1.97
MSH2YOL090W PDC2P32896 925 aa2.71□□□□□ -1.97
MSH2YOL090W DFG10P40526 253 aa2.71□□□□□ -1.97
MSH2YOL090W YIA6P40556 373 aa2.71□□□□□ -1.97
MSH2YOL090W AIM23P47015 356 aa2.71□□□□□ -1.97
MSH2YOL090W YDR248CQ03786 193 aa2.71□□□□□ -1.97
MSH2YOL090W UTP15Q04305 513 aaKnown RBP2.71□□□□□ -1.97
MSH2YOL090W YDR018CQ12185 396 aa2.71□□□□□ -1.97
MSH2YOL090W YPL119C-AQ3E751 87 aa2.71□□□□□ -1.97
MSH2YOL090W CUP2P15315 225 aa2.71□□□□□ -1.98
MSH2YOL090W SAM2P19358 384 aaKnown RBP2.71□□□□□ -1.98
MSH2YOL090W CLG1P35190 452 aa2.71□□□□□ -1.98
MSH2YOL090W AVT5P38176 459 aa2.71□□□□□ -1.98
MSH2YOL090W APD1P38281 316 aa2.71□□□□□ -1.98
MSH2YOL090W NDT80P38830 627 aa2.71□□□□□ -1.98
MSH2YOL090W YMR315WQ04869 349 aaKnown RBP2.71□□□□□ -1.98
MSH2YOL090W NOC4Q06512 552 aaPredicted RBP2.71□□□□□ -1.98
MSH2YOL090W FOL3Q12676 427 aaPredicted RBP2.71□□□□□ -1.98
MSH2YOL090W RPS14AP06367 137 aaKnown RBP2.71□□□□□ -1.98
MSH2YOL090W MET2P08465 486 aa2.71□□□□□ -1.98
MSH2YOL090W HCM1P25364 564 aa2.71□□□□□ -1.98
MSH2YOL090W SHG1P38337 142 aa2.71□□□□□ -1.98
MSH2YOL090W RPS14BP39516 138 aaKnown RBP2.71□□□□□ -1.98
MSH2YOL090W HEM14P40012 539 aa2.71□□□□□ -1.98
MSH2YOL090W SOK1P40317 901 aa2.71□□□□□ -1.98
MSH2YOL090W PRM10P42946 383 aa2.71□□□□□ -1.98
MSH2YOL090W IKS1P47042 667 aa2.71□□□□□ -1.98
MSH2YOL090W NSA1P53136 463 aaPredicted RBP2.71□□□□□ -1.98
MSH2YOL090W ARO80Q04052 950 aa2.71□□□□□ -1.98
MSH2YOL090W YPR098CQ06089 161 aa2.71□□□□□ -1.98
MSH2YOL090W YET3Q07451 203 aa2.71□□□□□ -1.98
MSH2YOL090W YDL114WQ07530 308 aa2.71□□□□□ -1.98
MSH2YOL090W MUM3Q08750 479 aa2.71□□□□□ -1.98
MSH2YOL090W RSA1Q08932 381 aa2.71□□□□□ -1.98
MSH2YOL090W DPM1P14020 267 aaKnown RBP2.7□□□□□ -1.98
MSH2YOL090W ISY1P21374 235 aaPredicted RBP2.7□□□□□ -1.98
MSH2YOL090W IFM1P25038 676 aa2.7□□□□□ -1.98
MSH2YOL090W MDH3P32419 343 aaKnown RBP RIP-Chip data2.7□□□□□ -1.98not detected
MSH2YOL090W SIP2P34164 415 aaKnown RBP2.7□□□□□ -1.98
MSH2YOL090W RCK1P38622 512 aa2.7□□□□□ -1.98
MSH2YOL090W GIM4P40005 111 aaKnown RBP2.7□□□□□ -1.98
MSH2YOL090W KRE29P40026 464 aa2.7□□□□□ -1.98
MSH2YOL090W HCH1P53834 153 aa2.7□□□□□ -1.98
MSH2YOL090W TPS1Q00764 495 aaKnown RBP2.7□□□□□ -1.98
MSH2YOL090W SPC24Q04477 213 aa2.7□□□□□ -1.98
MSH2YOL090W DPP1Q05521 289 aa2.7□□□□□ -1.98
MSH2YOL090W YLR446WQ06204 433 aa2.7□□□□□ -1.98
MSH2YOL090W HEM25Q07534 307 aa2.7□□□□□ -1.98
MSH2YOL090W TPO4Q12256 659 aa2.7□□□□□ -1.98
MSH2YOL090W MCT1Q12283 360 aa2.7□□□□□ -1.98
MSH2YOL090W EMP46Q12396 444 aa2.7□□□□□ -1.98
MSH2YOL090W PRM4Q12498 284 aa2.7□□□□□ -1.98
MSH2YOL090W RPO41P13433 1351 aaKnown RBP2.7□□□□□ -1.98
MSH2YOL090W AGA1P32323 725 aa2.7□□□□□ -1.98
MSH2YOL090W VPH2P32341 215 aa2.7□□□□□ -1.98
MSH2YOL090W YIL029CP40538 142 aa2.7□□□□□ -1.98
MSH2YOL090W MDV1P47025 714 aa2.7□□□□□ -1.98
MSH2YOL090W YJL016WP47072 561 aa2.7□□□□□ -1.98
MSH2YOL090W TPC1P53257 314 aa2.7□□□□□ -1.98
MSH2YOL090W TDA7P53882 636 aaPredicted RBP2.7□□□□□ -1.98
MSH2YOL090W NUP49Q02199 472 aa2.7□□□□□ -1.98
Retrieved 100 of 5,963 RNA–protein pairs in 35.5 ms