RNA–Protein interactions for RNA: YMR159C

ATG16, Transcript of Conserved protein involved in autophagy, yeastyeast

Gene ATG16, Length 453 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
ATG16YMR159C TAD2P47058 250 aa2.55□□□□□ -2
ATG16YMR159C KAP114P53067 1004 aa2.55□□□□□ -2
ATG16YMR159C YMR166CQ03829 368 aa2.55□□□□□ -2
ATG16YMR159C GRH1Q04410 372 aaKnown RBP2.55□□□□□ -2
ATG16YMR159C YOR283WQ12040 230 aaKnown RBP2.55□□□□□ -2
ATG16YMR159C YPL247CQ12523 523 aa2.55□□□□□ -2
ATG16YMR159C MET16P18408 261 aaPredicted RBP2.54□□□□□ -2
ATG16YMR159C DPB2P24482 689 aaPredicted RBP2.54□□□□□ -2
ATG16YMR159C PRM9P39551 298 aa2.54□□□□□ -2
ATG16YMR159C CGI121Q03705 181 aaKnown RBP2.54□□□□□ -2
ATG16YMR159C TY3A-GQ12173 290 aa2.54□□□□□ -2
ATG16YMR159C TY3A-IQ99219 290 aa2.54□□□□□ -2
ATG16YMR159C RAD10P06838 210 aa2.53□□□□□ -2
ATG16YMR159C GDH2P33327 1092 aaKnown RBP2.53□□□□□ -2
ATG16YMR159C YJL016WP47072 561 aa2.53□□□□□ -2
ATG16YMR159C YJR146WP47174 117 aa2.53□□□□□ -2
ATG16YMR159C NIF3P53081 288 aa2.53□□□□□ -2
ATG16YMR159C AAH1P53909 347 aa2.53□□□□□ -2
ATG16YMR159C CTR3Q06686 241 aa2.53□□□□□ -2
ATG16YMR159C RDS3Q06835 107 aaPredicted RBP2.53□□□□□ -2
ATG16YMR159C YHL049CP38722 271 aa2.52□□□□□ -2.01
ATG16YMR159C RCY1P39531 840 aa2.52□□□□□ -2.01
ATG16YMR159C DDI1P40087 428 aa2.52□□□□□ -2.01
ATG16YMR159C TIF34P40217 347 aaKnown RBP2.52□□□□□ -2.01
ATG16YMR159C YJL028WP47062 111 aa2.52□□□□□ -2.01
ATG16YMR159C DSK2P48510 373 aa2.52□□□□□ -2.01
ATG16YMR159C YMR114CQ04471 368 aaKnown RBP2.52□□□□□ -2.01
ATG16YMR159C STH1P32597 1359 aa2.51□□□□□ -2.01
ATG16YMR159C SSK22P25390 1331 aaPredicted RBP2.51□□□□□ -2.01
ATG16YMR159C RPL24AP04449 155 aaKnown RBP2.51□□□□□ -2.01
ATG16YMR159C RAD3P06839 778 aa2.51□□□□□ -2.01
ATG16YMR159C RNP1P32385 249 aa2.51□□□□□ -2.01
ATG16YMR159C COA1P40452 197 aa2.51□□□□□ -2.01
ATG16YMR159C MRPL49P40858 161 aaPredicted RBP2.51□□□□□ -2.01
ATG16YMR159C SUE1Q06524 206 aa2.51□□□□□ -2.01
ATG16YMR159C HIS1P00498 297 aaKnown RBP2.5□□□□□ -2.01
ATG16YMR159C GON7P46984 123 aa2.5□□□□□ -2.01
ATG16YMR159C EMC2P47133 292 aaKnown RBP2.5□□□□□ -2.01
ATG16YMR159C CAB4P53332 305 aa2.5□□□□□ -2.01
ATG16YMR159C MAL13P53338 473 aa2.5□□□□□ -2.01
ATG16YMR159C PST1Q12355 444 aa2.5□□□□□ -2.01
ATG16YMR159C COX2P00410 251 aa2.49□□□□□ -2.01
ATG16YMR159C OM45P16547 393 aa2.49□□□□□ -2.01
ATG16YMR159C ECM13P38195 257 aa2.49□□□□□ -2.01
ATG16YMR159C HEK2P38199 381 aaKnown RBP RIP-Chip data2.49□□□□□ -2.01not detected
ATG16YMR159C DSN1P40568 576 aa2.49□□□□□ -2.01
ATG16YMR159C MDM34P53083 459 aa2.49□□□□□ -2.01
ATG16YMR159C COS6P53344 381 aa2.49□□□□□ -2.01
ATG16YMR159C BOP2Q06150 570 aa2.49□□□□□ -2.01
ATG16YMR159C GEP5Q12393 293 aa2.49□□□□□ -2.01
ATG16YMR159C SCO1P23833 295 aa2.48□□□□□ -2.01
ATG16YMR159C MAL32P38158 584 aa2.48□□□□□ -2.01
ATG16YMR159C YHL026CP38740 315 aa2.48□□□□□ -2.01
ATG16YMR159C YAR1P46683 200 aa2.48□□□□□ -2.01
ATG16YMR159C YJR012CP47087 207 aa2.48□□□□□ -2.01
ATG16YMR159C MAL12P53341 584 aa2.48□□□□□ -2.01
ATG16YMR159C SLM2P53955 656 aa2.48□□□□□ -2.01
ATG16YMR159C PEX10Q05568 337 aa2.48□□□□□ -2.01
ATG16YMR159C SNF8Q12483 233 aa2.48□□□□□ -2.01
ATG16YMR159C CWP1P28319 239 aa2.47□□□□□ -2.01
ATG16YMR159C ASI3P53983 676 aa2.47□□□□□ -2.01
ATG16YMR159C PEX12Q04370 399 aa2.47□□□□□ -2.01
ATG16YMR159C ALG11P53954 548 aaKnown RBP2.46□□□□□ -2.02
ATG16YMR159C OST6Q03723 332 aa2.46□□□□□ -2.02
ATG16YMR159C EMI1Q04406 187 aa2.46□□□□□ -2.02
ATG16YMR159C EMC6Q12431 108 aa2.46□□□□□ -2.02
ATG16YMR159C VPS3P23643 1011 aa2.45□□□□□ -2.02
ATG16YMR159C RTT105P40063 208 aa2.45□□□□□ -2.02
ATG16YMR159C RPL10P41805 221 aaKnown RBP2.45□□□□□ -2.02
ATG16YMR159C SLD7Q08457 257 aa2.45□□□□□ -2.02
ATG16YMR159C EMP46Q12396 444 aa2.45□□□□□ -2.02
ATG16YMR159C SGA1P08019 549 aa2.44□□□□□ -2.02
ATG16YMR159C POX1P13711 748 aa2.44□□□□□ -2.02
ATG16YMR159C CCA1P21269 546 aa2.44□□□□□ -2.02
ATG16YMR159C SCM4P32564 187 aa2.44□□□□□ -2.02
ATG16YMR159C MRPL37P36532 105 aa2.44□□□□□ -2.02
ATG16YMR159C PRS2P38620 318 aaKnown RBP2.44□□□□□ -2.02
ATG16YMR159C GRE3P38715 327 aaKnown RBP RIP-Chip data2.44□□□□□ -2.02not detected
ATG16YMR159C DAL82P21705 255 aa2.43□□□□□ -2.02
ATG16YMR159C QRI5P32344 111 aa2.43□□□□□ -2.02
ATG16YMR159C NRG2P38082 220 aa2.43□□□□□ -2.02
ATG16YMR159C OST2P46964 130 aa2.43□□□□□ -2.02
ATG16YMR159C DAN1P47178 298 aa2.43□□□□□ -2.02
ATG16YMR159C GPI8P49018 411 aa2.43□□□□□ -2.02
ATG16YMR159C EBS1Q03466 884 aaKnown RBP2.43□□□□□ -2.02
ATG16YMR159C ADH6Q04894 360 aaKnown RBP2.43□□□□□ -2.02
ATG16YMR159C COX20Q04935 205 aa2.43□□□□□ -2.02
ATG16YMR159C YPL119C-AQ3E751 87 aa2.43□□□□□ -2.02
ATG16YMR159C SAS5Q99314 248 aa2.43□□□□□ -2.02
ATG16YMR159C MRP1P10662 321 aaKnown RBP2.42□□□□□ -2.02
ATG16YMR159C POL30P15873 258 aaKnown RBP2.42□□□□□ -2.02
ATG16YMR159C RSM10Q03201 203 aa2.42□□□□□ -2.02
ATG16YMR159C ATG17Q06410 417 aa2.42□□□□□ -2.02
ATG16YMR159C YBL008W-AQ3E821 79 aa2.42□□□□□ -2.02
ATG16YMR159C DCR2Q05924 578 aa2.41□□□□□ -2.02
ATG16YMR159C YOR062CP36025 268 aa2.4□□□□□ -2.03
ATG16YMR159C MRX3P38172 270 aa2.4□□□□□ -2.03
ATG16YMR159C SSH1P38353 490 aaKnown RBP2.4□□□□□ -2.03
ATG16YMR159C YJL118WP47022 219 aa2.4□□□□□ -2.03
ATG16YMR159C NBP1P52919 319 aaPredicted RBP2.4□□□□□ -2.03
Retrieved 100 of 5,963 RNA–protein pairs in 13.3 ms