RNA–Protein interactions for RNA: YLR336C

SGD1, Transcript of Essential nuclear protein, yeastyeast

Gene SGD1, Length 2,700 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
SGD1YLR336C FEX1Q08913 375 aa1.4□□□□□ -2.19
SGD1YLR336C FEX2Q08991 375 aa1.4□□□□□ -2.19
SGD1YLR336C AGC1Q12482 902 aa1.4□□□□□ -2.19
SGD1YLR336C SMB1P40018 196 aaKnown RBP1.39□□□□□ -2.19
SGD1YLR336C DSN1P40568 576 aa1.39□□□□□ -2.19
SGD1YLR336C BUD13P46947 266 aaPredicted RBP1.39□□□□□ -2.19
SGD1YLR336C GLG2P47011 380 aa1.39□□□□□ -2.19
SGD1YLR336C RLP24Q07915 199 aaKnown RBP1.39□□□□□ -2.19
SGD1YLR336C BTS1Q12051 335 aa1.39□□□□□ -2.19
SGD1YLR336C DAL82P21705 255 aa1.39□□□□□ -2.19
SGD1YLR336C PRS2P38620 318 aaKnown RBP1.39□□□□□ -2.19
SGD1YLR336C RPL10P41805 221 aaKnown RBP1.39□□□□□ -2.19
SGD1YLR336C YNL134CP53912 376 aaKnown RBP1.39□□□□□ -2.19
SGD1YLR336C CTF19Q02732 369 aa1.39□□□□□ -2.19
SGD1YLR336C ADH6Q04894 360 aaKnown RBP1.39□□□□□ -2.19
SGD1YLR336C SDO1Q07953 250 aaKnown RBP1.39□□□□□ -2.19
SGD1YLR336C YPL150WQ12152 901 aa1.39□□□□□ -2.19
SGD1YLR336C YOR029WQ12243 111 aa1.39□□□□□ -2.19
SGD1YLR336C NOT5Q12514 560 aaPredicted RBP1.39□□□□□ -2.19
SGD1YLR336C YPL119C-AQ3E751 87 aa1.39□□□□□ -2.19
SGD1YLR336C PRS4P38063 326 aaPredicted RBP1.38□□□□□ -2.19
SGD1YLR336C YHI9P38765 294 aa1.38□□□□□ -2.19
SGD1YLR336C YER188WP40103 239 aa1.38□□□□□ -2.19
SGD1YLR336C YDR114CQ04597 100 aa1.38□□□□□ -2.19
SGD1YLR336C NUP157P40064 1391 aaKnown RBP1.38□□□□□ -2.19
SGD1YLR336C RAD3P06839 778 aa1.38□□□□□ -2.19
SGD1YLR336C MRP1P10662 321 aaKnown RBP1.38□□□□□ -2.19
SGD1YLR336C COY1P34237 679 aa1.38□□□□□ -2.19
SGD1YLR336C YJL028WP47062 111 aa1.38□□□□□ -2.19
SGD1YLR336C NIF3P53081 288 aa1.38□□□□□ -2.19
SGD1YLR336C YGL034CP53186 121 aa1.38□□□□□ -2.19
SGD1YLR336C AAH1P53909 347 aa1.38□□□□□ -2.19
SGD1YLR336C EMI1Q04406 187 aa1.38□□□□□ -2.19
SGD1YLR336C YPL247CQ12523 523 aa1.38□□□□□ -2.19
SGD1YLR336C YPR096CO13587 100 aa1.38□□□□□ -2.19
SGD1YLR336C CAB3P36076 571 aa1.38□□□□□ -2.19
SGD1YLR336C YBR096WP38256 230 aa1.38□□□□□ -2.19
SGD1YLR336C SSU72P53538 206 aaPredicted RBP1.38□□□□□ -2.19
SGD1YLR336C DIA1P54005 336 aa1.38□□□□□ -2.19
SGD1YLR336C PEX10Q05568 337 aa1.38□□□□□ -2.19
SGD1YLR336C CLP1Q08685 445 aaPredicted RBP1.38□□□□□ -2.19
SGD1YLR336C ISD11Q6Q560 94 aa1.38□□□□□ -2.19
SGD1YLR336C YEL009C-AA0A023PZF2 135 aa1.37□□□□□ -2.19
SGD1YLR336C RSA4P25382 515 aaKnown RBP1.37□□□□□ -2.19
SGD1YLR336C JEN1P36035 616 aa1.37□□□□□ -2.19
SGD1YLR336C MRX3P38172 270 aa1.37□□□□□ -2.19
SGD1YLR336C AGX1P43567 385 aa1.37□□□□□ -2.19
SGD1YLR336C MDM34P53083 459 aa1.37□□□□□ -2.19
SGD1YLR336C YLR173WQ06247 608 aa1.37□□□□□ -2.19
SGD1YLR336C YOR268CQ08734 132 aa1.37□□□□□ -2.19
SGD1YLR336C RAD10P06838 210 aa1.37□□□□□ -2.19
SGD1YLR336C GDH2P33327 1092 aaKnown RBP1.37□□□□□ -2.19
SGD1YLR336C YHR045WP38775 560 aa1.37□□□□□ -2.19
SGD1YLR336C BNA6P43619 295 aa1.37□□□□□ -2.19
SGD1YLR336C SLX9P53251 210 aaPredicted RBP1.37□□□□□ -2.19
SGD1YLR336C RRN5Q02983 363 aa1.37□□□□□ -2.19
SGD1YLR336C COQ10Q08058 207 aa1.37□□□□□ -2.19
SGD1YLR336C MSH5Q12175 901 aa1.37□□□□□ -2.19
SGD1YLR336C YPR011CQ12251 326 aa1.37□□□□□ -2.19
SGD1YLR336C ATG31Q12421 196 aa1.37□□□□□ -2.19
SGD1YLR336C POX1P13711 748 aa1.36□□□□□ -2.19
SGD1YLR336C VPS3P23643 1011 aa1.36□□□□□ -2.19
SGD1YLR336C HOM6P31116 359 aaKnown RBP1.36□□□□□ -2.19
SGD1YLR336C MED6P38782 295 aa1.36□□□□□ -2.19
SGD1YLR336C MIX17Q03667 156 aa1.36□□□□□ -2.19
SGD1YLR336C TY3A-GQ12173 290 aa1.36□□□□□ -2.19
SGD1YLR336C SMT3Q12306 101 aaKnown RBP1.36□□□□□ -2.19
SGD1YLR336C TY3A-IQ99219 290 aa1.36□□□□□ -2.19
SGD1YLR336C DPB2P24482 689 aaPredicted RBP1.36□□□□□ -2.19
SGD1YLR336C BMH1P29311 267 aaKnown RBP1.36□□□□□ -2.19
SGD1YLR336C SFC1P33303 322 aa1.36□□□□□ -2.19
SGD1YLR336C ECM13P38195 257 aa1.36□□□□□ -2.19
SGD1YLR336C SNZ3P43545 298 aa1.36□□□□□ -2.19
SGD1YLR336C SYF2P53277 215 aaPredicted RBP1.36□□□□□ -2.19
SGD1YLR336C BOP2Q06150 570 aa1.36□□□□□ -2.19
SGD1YLR336C SNF8Q12483 233 aa1.36□□□□□ -2.19
SGD1YLR336C TCP1P12612 559 aaKnown RBP1.35□□□□□ -2.19
SGD1YLR336C PPH21P23594 369 aa1.35□□□□□ -2.19
SGD1YLR336C YKR032WP36127 104 aa1.35□□□□□ -2.19
SGD1YLR336C TEM1P38987 245 aa1.35□□□□□ -2.19
SGD1YLR336C CAB4P53332 305 aa1.35□□□□□ -2.19
SGD1YLR336C YDR209CQ03480 137 aa1.35□□□□□ -2.19
SGD1YLR336C GEP5Q12393 293 aa1.35□□□□□ -2.19
SGD1YLR336C GON7P46984 123 aa1.35□□□□□ -2.19
SGD1YLR336C JHD2P47156 728 aaPredicted RBP1.35□□□□□ -2.19
SGD1YLR336C ASI3P53983 676 aa1.35□□□□□ -2.19
SGD1YLR336C YMR114CQ04471 368 aaKnown RBP1.35□□□□□ -2.19
SGD1YLR336C MAL32P38158 584 aa1.34□□□□□ -2.19
SGD1YLR336C GOS1P38736 223 aa1.34□□□□□ -2.19
SGD1YLR336C MAL12P53341 584 aa1.34□□□□□ -2.19
SGD1YLR336C SNZ2P53824 298 aa1.34□□□□□ -2.19
SGD1YLR336C IGO1P53897 168 aa1.34□□□□□ -2.19
SGD1YLR336C RDS3Q06835 107 aaPredicted RBP1.34□□□□□ -2.19
SGD1YLR336C YBL008W-AQ3E821 79 aa1.34□□□□□ -2.19
SGD1YLR336C YKR104WP0CE69 306 aa1.34□□□□□ -2.2
SGD1YLR336C DPM1P14020 267 aaKnown RBP1.34□□□□□ -2.2
SGD1YLR336C RNA15P25299 296 aaPredicted RBP1.34□□□□□ -2.2
SGD1YLR336C RNP1P32385 249 aa1.34□□□□□ -2.2
SGD1YLR336C YJR146WP47174 117 aa1.34□□□□□ -2.2
SGD1YLR336C SRL4Q03085 281 aa1.34□□□□□ -2.2
Retrieved 100 of 5,963 RNA–protein pairs in 17 ms