RNA–Protein interactions for RNA: YKR036C

CAF4, Transcript of WD40 repeat-containing protein associated with the CCR4-NOT complex, yeastyeast

Gene CAF4, Length 1,932 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
CAF4YKR036C FAT1P38225 669 aa4.43□□□□□ -1.7
CAF4YKR036C YPC1P38298 316 aa4.43□□□□□ -1.7
CAF4YKR036C GIM4P40005 111 aaKnown RBP4.43□□□□□ -1.7
CAF4YKR036C YER188WP40103 239 aa4.43□□□□□ -1.7
CAF4YKR036C YIL152WP40455 235 aa4.43□□□□□ -1.7
CAF4YKR036C CSN12P47130 423 aa4.43□□□□□ -1.7
CAF4YKR036C RSM7P47150 247 aa4.43□□□□□ -1.7
CAF4YKR036C OST3P48439 350 aa4.43□□□□□ -1.7
CAF4YKR036C TYW3P53177 273 aa4.43□□□□□ -1.7
CAF4YKR036C PAU12P53343 120 aa4.43□□□□□ -1.7
CAF4YKR036C YIF1P53845 314 aaKnown RBP4.43□□□□□ -1.7
CAF4YKR036C MSC1Q03104 513 aa4.43□□□□□ -1.7
CAF4YKR036C YOR385WQ08909 290 aa4.43□□□□□ -1.7
CAF4YKR036C YDR056CQ12025 205 aa4.43□□□□□ -1.7
CAF4YKR036C PCL9Q12477 304 aa4.43□□□□□ -1.7
CAF4YKR036C YGR161W-CQ3E744 92 aa4.43□□□□□ -1.7
CAF4YKR036C PNO1Q99216 274 aaKnown RBP4.43□□□□□ -1.7
CAF4YKR036C YLR149CQ99296 730 aa4.43□□□□□ -1.7
CAF4YKR036C COX3P00420 269 aa4.42□□□□□ -1.7
CAF4YKR036C DAL80P26343 269 aa4.42□□□□□ -1.7
CAF4YKR036C PEX4P29340 183 aa4.42□□□□□ -1.7
CAF4YKR036C MET22P32179 357 aa4.42□□□□□ -1.7
CAF4YKR036C YMC1P32331 307 aa4.42□□□□□ -1.7
CAF4YKR036C SKN1P33336 771 aa4.42□□□□□ -1.7
CAF4YKR036C THI2P38141 450 aa4.42□□□□□ -1.7
CAF4YKR036C GPI16P38875 610 aa4.42□□□□□ -1.7
CAF4YKR036C CHL4P38907 458 aa4.42□□□□□ -1.7
CAF4YKR036C SUR2P38992 349 aa4.42□□□□□ -1.7
CAF4YKR036C YJR056CP47115 236 aa4.42□□□□□ -1.7
CAF4YKR036C MRX6P48564 524 aa4.42□□□□□ -1.7
CAF4YKR036C MGA1P53050 456 aa4.42□□□□□ -1.7
CAF4YKR036C NSA1P53136 463 aaPredicted RBP4.42□□□□□ -1.7
CAF4YKR036C YGL101WP53144 215 aa4.42□□□□□ -1.7
CAF4YKR036C COG7P53195 279 aa4.42□□□□□ -1.7
CAF4YKR036C YGR151CP53287 111 aa4.42□□□□□ -1.7
CAF4YKR036C APJ1P53940 528 aa4.42□□□□□ -1.7
CAF4YKR036C GRX8Q05926 109 aa4.42□□□□□ -1.7
CAF4YKR036C MRL1Q06815 381 aa4.42□□□□□ -1.7
CAF4YKR036C HEM25Q07534 307 aa4.42□□□□□ -1.7
CAF4YKR036C YLR012CQ07927 99 aa4.42□□□□□ -1.7
CAF4YKR036C CRT10Q08226 957 aa4.42□□□□□ -1.7
CAF4YKR036C PUF2Q12221 1075 aaKnown RBP RIP-Chip data4.42□□□□□ -1.7not detected
CAF4YKR036C PRS5Q12265 496 aaKnown RBP4.42□□□□□ -1.7
CAF4YKR036C PRM4Q12498 284 aa4.42□□□□□ -1.7
CAF4YKR036C STE4P18851 423 aa4.42□□□□□ -1.7
CAF4YKR036C GPI12P23797 304 aa4.42□□□□□ -1.7
CAF4YKR036C BOS1P25385 244 aa4.42□□□□□ -1.7
CAF4YKR036C YJU3P28321 313 aa4.42□□□□□ -1.7
CAF4YKR036C LAC1P28496 418 aa4.42□□□□□ -1.7
CAF4YKR036C SFP1P32432 683 aa4.42□□□□□ -1.7
CAF4YKR036C UTH1P36135 365 aa4.42□□□□□ -1.7
CAF4YKR036C YCR087C-AP37263 153 aa4.42□□□□□ -1.7
CAF4YKR036C YBR096WP38256 230 aa4.42□□□□□ -1.7
CAF4YKR036C STS1P38637 319 aa4.42□□□□□ -1.7
CAF4YKR036C DBP8P38719 431 aa4.42□□□□□ -1.7
CAF4YKR036C SKN7P38889 622 aa4.42□□□□□ -1.7
CAF4YKR036C SPC25P40014 221 aa4.42□□□□□ -1.7
CAF4YKR036C PMT6P42934 759 aa4.42□□□□□ -1.7
CAF4YKR036C TRM112P53738 135 aaPredicted RBP4.42□□□□□ -1.7
CAF4YKR036C BNA5Q05979 453 aa4.42□□□□□ -1.7
CAF4YKR036C PIN3Q06449 215 aa4.42□□□□□ -1.7
CAF4YKR036C RDR1Q08904 546 aa4.42□□□□□ -1.7
CAF4YKR036C PBN1P25580 416 aa4.41□□□□□ -1.7
CAF4YKR036C MF(ALPHA)2P32435 120 aa4.41□□□□□ -1.7
CAF4YKR036C RML2P32611 393 aa4.41□□□□□ -1.7
CAF4YKR036C PAU2P32612 120 aa4.41□□□□□ -1.7
CAF4YKR036C ALK1P43633 760 aaKnown RBP4.41□□□□□ -1.7
CAF4YKR036C DLD2P46681 530 aaKnown RBP4.41□□□□□ -1.7
CAF4YKR036C BNS1P50084 137 aa4.41□□□□□ -1.7
CAF4YKR036C PNC1P53184 216 aaKnown RBP4.41□□□□□ -1.7
CAF4YKR036C YPL067CQ02754 198 aa4.41□□□□□ -1.7
CAF4YKR036C MSC3Q05812 728 aa4.41□□□□□ -1.7
CAF4YKR036C REX4Q08237 289 aa4.41□□□□□ -1.7
CAF4YKR036C YOP1Q12402 180 aa4.41□□□□□ -1.7
CAF4YKR036C COX19Q3E731 98 aa4.41□□□□□ -1.7
CAF4YKR036C SOD2P00447 233 aa4.4□□□□□ -1.7
CAF4YKR036C RIP1P08067 215 aa4.4□□□□□ -1.7
CAF4YKR036C RPS25BP0C0T4 108 aaKnown RBP4.4□□□□□ -1.7
CAF4YKR036C PAU19P0CE85 124 aa4.4□□□□□ -1.7
CAF4YKR036C PAU21P0CE86 164 aa4.4□□□□□ -1.7
CAF4YKR036C PAU22P0CE87 164 aa4.4□□□□□ -1.7
CAF4YKR036C HAP3P13434 144 aa4.4□□□□□ -1.7
CAF4YKR036C ADH7P25377 361 aa4.4□□□□□ -1.7
CAF4YKR036C PAU3P25610 124 aa4.4□□□□□ -1.7
CAF4YKR036C DCW1P36091 449 aa4.4□□□□□ -1.7
CAF4YKR036C URA8P38627 578 aaPredicted RBP4.4□□□□□ -1.7
CAF4YKR036C WSC4P38739 605 aa4.4□□□□□ -1.7
CAF4YKR036C VAC8P39968 578 aa4.4□□□□□ -1.7
CAF4YKR036C YIL060WP40519 144 aa4.4□□□□□ -1.7
CAF4YKR036C SYS1P41544 203 aa4.4□□□□□ -1.7
CAF4YKR036C NPY1P53164 384 aa4.4□□□□□ -1.7
CAF4YKR036C RHO3Q00245 231 aaKnown RBP4.4□□□□□ -1.7
CAF4YKR036C OAZ1Q02803 292 aa4.4□□□□□ -1.7
CAF4YKR036C YMR315WQ04869 349 aaKnown RBP4.4□□□□□ -1.7
CAF4YKR036C PEX30Q06169 523 aa4.4□□□□□ -1.7
CAF4YKR036C AIM45Q12480 344 aaKnown RBP4.4□□□□□ -1.7
CAF4YKR036C RPS25AQ3E792 108 aaPredicted RBP4.4□□□□□ -1.7
CAF4YKR036C YCL012CQ8J0M4 134 aa4.4□□□□□ -1.7
CAF4YKR036C POP5P28005 173 aa4.4□□□□□ -1.71
CAF4YKR036C ERG24P32462 438 aaKnown RBP4.4□□□□□ -1.71
Retrieved 100 of 5,963 RNA–protein pairs in 15.4 ms